Protein–RNA interactions for Protein: P11978

SIR4, Regulatory protein SIR4, yeastyeast

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR4P11978 YMR316C-BYMR316C-B 309 nt10.22□□□□□ -0.77
SIR4P11978 NUP53YMR153W 1428 nt10.21□□□□□ -0.77
SIR4P11978 MET22YOL064C 1074 nt10.21□□□□□ -0.78
SIR4P11978 YIL168WYIL168W 384 nt10.2□□□□□ -0.78
SIR4P11978 OLA1YBR025C 1185 nt10.18□□□□□ -0.78
SIR4P11978 AAT1YKL106W 1356 nt10.17□□□□□ -0.78
SIR4P11978 YPT31YER031C 672 nt10.15□□□□□ -0.78
SIR4P11978 YJL009WYJL009W 327 nt10.15□□□□□ -0.78
SIR4P11978 MRS4YKR052C 915 nt10.14□□□□□ -0.79
SIR4P11978 PDC6YGR087C 1692 nt10.13□□□□□ -0.79
SIR4P11978 YLR358CYLR358C 564 nt10.13□□□□□ -0.79
SIR4P11978 RHO1YPR165W 630 nt10.13□□□□□ -0.79
SIR4P11978 COS10YNR075W 1125 nt10.12□□□□□ -0.79
SIR4P11978 MAE1YKL029C 2010 nt10.11□□□□□ -0.79
SIR4P11978 RRT6YGL146C 936 nt10.11□□□□□ -0.79
SIR4P11978 AAC3YBR085W 924 nt10.1□□□□□ -0.79
SIR4P11978 MTO1YGL236C 2010 nt10.09□□□□□ -0.79
SIR4P11978 RNA170RNA170 169 nt10.09□□□□□ -0.79
SIR4P11978 TPN1YGL186C 1740 nt10.08□□□□□ -0.8
SIR4P11978 TRP2YER090W 1524 nt10.07□□□□□ -0.8
SIR4P11978 YDR476CYDR476C 675 nt10.07□□□□□ -0.8
SIR4P11978 HAC1YFL031W 717 nt10.07□□□□□ -0.8
SIR4P11978 THI73YLR004C 1572 nt10.07□□□□□ -0.8
SIR4P11978 TMS1YDR105C 1422 nt10.06□□□□□ -0.8
SIR4P11978 ATP2YJR121W 1536 nt10.06□□□□□ -0.8
SIR4P11978 snR86snR86 1004 nt10.05□□□□□ -0.8
SIR4P11978 MEP1YGR121C 1479 nt10.04□□□□□ -0.8
SIR4P11978 RPR1RPR1 369 nt10.04□□□□□ -0.8
SIR4P11978 SHC1YER096W 1539 nt10.03□□□□□ -0.8
SIR4P11978 THI6YPL214C 1623 nt10.03□□□□□ -0.8
SIR4P11978 BUB2YMR055C 921 nt10.01□□□□□ -0.81
SIR4P11978 NCA3YJL116C 1014 nt10.01□□□□□ -0.81
SIR4P11978 YIR035CYIR035C 765 nt9.99□□□□□ -0.81
SIR4P11978 YML079WYML079W 606 nt9.99□□□□□ -0.81
SIR4P11978 FET5YFL041W 1869 nt9.98□□□□□ -0.81
SIR4P11978 PUP3YER094C 618 nt9.97□□□□□ -0.81
SIR4P11978 PSP2YML017W 1782 nt9.96□□□□□ -0.81
SIR4P11978 NBA1YOL070C 1506 nt9.96□□□□□ -0.81
SIR4P11978 YBR056WYBR056W 1506 nt9.95□□□□□ -0.82
SIR4P11978 TPO4YOR273C 1980 nt9.93□□□□□ -0.82
SIR4P11978 PUP2YGR253C 783 nt9.92□□□□□ -0.82
SIR4P11978 APT1YML022W 564 nt9.91□□□□□ -0.82
SIR4P11978 HXT11YOL156W 1704 nt9.91□□□□□ -0.82
SIR4P11978 SRM1YGL097W 1449 nt9.91□□□□□ -0.82
SIR4P11978 PNS1YOR161C 1620 nt9.9□□□□□ -0.82
SIR4P11978 JHD1YER051W 1479 nt9.9□□□□□ -0.82
SIR4P11978 SPR1YOR190W 1338 nt9.89□□□□□ -0.83
SIR4P11978 CPT1YNL130C 1182 nt9.88□□□□□ -0.83
SIR4P11978 YHL008CYHL008C 1884 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)BtD(GUC)B 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)DtD(GUC)D 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)G1tD(GUC)G1 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)G2tD(GUC)G2 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)I1tD(GUC)I1 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)I2tD(GUC)I2 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)J1tD(GUC)J1 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)J2tD(GUC)J2 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)J3tD(GUC)J3 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)J4tD(GUC)J4 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)KtD(GUC)K 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)L1tD(GUC)L1 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)L2tD(GUC)L2 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)MtD(GUC)M 72 nt9.87□□□□□ -0.83
SIR4P11978 tD(GUC)OtD(GUC)O 72 nt9.87□□□□□ -0.83
SIR4P11978 PMU1YKL128C 888 nt9.87□□□□□ -0.83
SIR4P11978 URA1YKL216W 945 nt9.87□□□□□ -0.83
SIR4P11978 INO1YJL153C 1602 nt9.87□□□□□ -0.83
SIR4P11978 PRE10YOR362C 867 nt9.86□□□□□ -0.83
SIR4P11978 TIM50YPL063W 1431 nt9.86□□□□□ -0.83
SIR4P11978 YHL030W-AYHL030W-A 462 nt9.84□□□□□ -0.83
SIR4P11978 YAL019W-AYAL019W-A 570 nt9.84□□□□□ -0.83
SIR4P11978 ESBP6YNL125C 2022 nt9.84□□□□□ -0.83
SIR4P11978 HIS3YOR202W 663 nt9.83□□□□□ -0.84
SIR4P11978 SLM3YDL033C 1254 nt9.8□□□□□ -0.84
SIR4P11978 HXT8YJL214W 1710 nt9.8□□□□□ -0.84
SIR4P11978 ABP1YCR088W 1779 nt9.8□□□□□ -0.84
SIR4P11978 LRO1YNR008W 1986 nt9.79□□□□□ -0.84
SIR4P11978 BUD31YCR063W 474 nt9.79□□□□□ -0.84
SIR4P11978 PIH1YHR034C 1035 nt9.79□□□□□ -0.84
SIR4P11978 ATP23YNR020C 813 nt9.79□□□□□ -0.84
SIR4P11978 LEA1YPL213W 717 nt9.79□□□□□ -0.84
SIR4P11978 FTH1YBR207W 1398 nt9.78□□□□□ -0.84
SIR4P11978 RCF1YML030W 480 nt9.78□□□□□ -0.84
SIR4P11978 MIM1YOL026C 342 nt9.78□□□□□ -0.84
SIR4P11978 LAT1YNL071W 1449 nt9.78□□□□□ -0.84
SIR4P11978 YLR072WYLR072W 2082 nt9.77□□□□□ -0.85
SIR4P11978 YBL111CYBL111C 2004 nt9.76□□□□□ -0.85
SIR4P11978 YOX1YML027W 1158 nt9.75□□□□□ -0.85
SIR4P11978 UME1YPL139C 1383 nt9.75□□□□□ -0.85
SIR4P11978 NDE2YDL085W 1638 nt9.75□□□□□ -0.85
SIR4P11978 EHT1YBR177C 1356 nt9.74□□□□□ -0.85
SIR4P11978 YOR072WYOR072W 315 nt9.74□□□□□ -0.85
SIR4P11978 DOC1YGL240W 753 nt9.73□□□□□ -0.85
SIR4P11978 CYS3YAL012W 1185 nt9.73□□□□□ -0.85
SIR4P11978 snR4snR4 186 nt9.73□□□□□ -0.85
SIR4P11978 ALG7YBR243C 1347 nt9.73□□□□□ -0.85
SIR4P11978 ORT1YOR130C 879 nt9.72□□□□□ -0.85
SIR4P11978 DIP5YPL265W 1827 nt9.72□□□□□ -0.85
SIR4P11978 SRY1YKL218C 981 nt9.7□□□□□ -0.86
SIR4P11978 YJL144WYJL144W 315 nt9.68□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 70.5 ms