Protein–RNA interactions for Protein: P0CX85

RPL35B, 60S ribosomal protein L35-B, yeastyeast

Known RBP Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL35BP0CX85 tA(UGC)GtA(UGC)G 73 nt7□□□□□ -1.29
RPL35BP0CX85 tA(UGC)LtA(UGC)L 73 nt7□□□□□ -1.29
RPL35BP0CX85 tA(UGC)OtA(UGC)O 73 nt7□□□□□ -1.29
RPL35BP0CX85 YDR467CYDR467C 327 nt7□□□□□ -1.29
RPL35BP0CX85 MET30YIL046W 1923 nt6.99□□□□□ -1.29
RPL35BP0CX85 OLA1YBR025C 1185 nt6.99□□□□□ -1.29
RPL35BP0CX85 YJL160CYJL160C 864 nt6.98□□□□□ -1.29
RPL35BP0CX85 FCY1YPR062W 477 nt6.98□□□□□ -1.29
RPL35BP0CX85 AAC3YBR085W 924 nt6.98□□□□□ -1.29
RPL35BP0CX85 FRT1YOR324C 1809 nt6.98□□□□□ -1.29
RPL35BP0CX85 MEX67YPL169C 1800 nt6.98□□□□□ -1.29
RPL35BP0CX85 TMS1YDR105C 1422 nt6.98□□□□□ -1.29
RPL35BP0CX85 LEU4YNL104C 1860 nt6.98□□□□□ -1.29
RPL35BP0CX85 tE(CUC)DtE(CUC)D 72 nt6.97□□□□□ -1.29
RPL35BP0CX85 tE(CUC)ItE(CUC)I 72 nt6.97□□□□□ -1.29
RPL35BP0CX85 YNL190WYNL190W 615 nt6.97□□□□□ -1.29
RPL35BP0CX85 YBL095WYBL095W 813 nt6.97□□□□□ -1.29
RPL35BP0CX85 LSP1YPL004C 1026 nt6.97□□□□□ -1.29
RPL35BP0CX85 BAP3YDR046C 1815 nt6.97□□□□□ -1.29
RPL35BP0CX85 YHR218WYHR218W 1812 nt6.97□□□□□ -1.29
RPL35BP0CX85 OCH1YGL038C 1443 nt6.96□□□□□ -1.3
RPL35BP0CX85 SMC5YOL034W 3282 nt6.96□□□□□ -1.3
RPL35BP0CX85 CAK1YFL029C 1107 nt6.95□□□□□ -1.3
RPL35BP0CX85 MET22YOL064C 1074 nt6.95□□□□□ -1.3
RPL35BP0CX85 PDC6YGR087C 1692 nt6.95□□□□□ -1.3
RPL35BP0CX85 LAS17YOR181W 1902 nt6.95□□□□□ -1.3
RPL35BP0CX85 CMK2YOL016C 1344 nt6.95□□□□□ -1.3
RPL35BP0CX85 YER156CYER156C 1017 nt6.94□□□□□ -1.3
RPL35BP0CX85 CRN1YLR429W 1956 nt6.94□□□□□ -1.3
RPL35BP0CX85 HEL1YKR017C 1656 nt6.93□□□□□ -1.3
RPL35BP0CX85 BEM1YBR200W 1656 nt6.93□□□□□ -1.3
RPL35BP0CX85 HRA1HRA1 564 nt6.93□□□□□ -1.3
RPL35BP0CX85 MFT1YML062C 1179 nt6.93□□□□□ -1.3
RPL35BP0CX85 BUB2YMR055C 921 nt6.93□□□□□ -1.3
RPL35BP0CX85 YMC2YBR104W 990 nt6.93□□□□□ -1.3
RPL35BP0CX85 FIT1YDR534C 1587 nt6.92□□□□□ -1.3
RPL35BP0CX85 MRP1YDR347W 966 nt6.92□□□□□ -1.3
RPL35BP0CX85 EMC3YKL207W 762 nt6.92□□□□□ -1.3
RPL35BP0CX85 MRS4YKR052C 915 nt6.92□□□□□ -1.3
RPL35BP0CX85 YOR343CYOR343C 327 nt6.92□□□□□ -1.3
RPL35BP0CX85 YMR210WYMR210W 1350 nt6.92□□□□□ -1.3
RPL35BP0CX85 UBP13YBL067C 2244 nt6.92□□□□□ -1.3
RPL35BP0CX85 AGP3YFL055W 1677 nt6.91□□□□□ -1.3
RPL35BP0CX85 GRH1YDR517W 1119 nt6.91□□□□□ -1.3
RPL35BP0CX85 BUD20YLR074C 501 nt6.91□□□□□ -1.3
RPL35BP0CX85 PAU21YOR394W 495 nt6.91□□□□□ -1.3
RPL35BP0CX85 PAU22YPL282C 495 nt6.91□□□□□ -1.3
RPL35BP0CX85 YPR084WYPR084W 1371 nt6.91□□□□□ -1.3
RPL35BP0CX85 RPL12BYDR418W 498 nt6.89□□□□□ -1.31
RPL35BP0CX85 GDH1YOR375C 1365 nt6.88□□□□□ -1.31
RPL35BP0CX85 YPT31YER031C 672 nt6.88□□□□□ -1.31
RPL35BP0CX85 RNA170RNA170 169 nt6.88□□□□□ -1.31
RPL35BP0CX85 DAL7YIR031C 1665 nt6.87□□□□□ -1.31
RPL35BP0CX85 YEN1YER041W 2280 nt6.87□□□□□ -1.31
RPL35BP0CX85 AFG2YLR397C 2343 nt6.87□□□□□ -1.31
RPL35BP0CX85 ADA2YDR448W 1305 nt6.85□□□□□ -1.31
RPL35BP0CX85 YJL009WYJL009W 327 nt6.85□□□□□ -1.31
RPL35BP0CX85 TAD2YJL035C 753 nt6.85□□□□□ -1.31
RPL35BP0CX85 YAL016C-AYAL016C-A 315 nt6.85□□□□□ -1.31
RPL35BP0CX85 YJR149WYJR149W 1215 nt6.85□□□□□ -1.31
RPL35BP0CX85 PMU1YKL128C 888 nt6.85□□□□□ -1.31
RPL35BP0CX85 YMR206WYMR206W 942 nt6.85□□□□□ -1.31
RPL35BP0CX85 Q0010Q0010 387 nt6.85□□□□□ -1.31
RPL35BP0CX85 YBR056WYBR056W 1506 nt6.85□□□□□ -1.31
RPL35BP0CX85 NPP2YEL016C 1482 nt6.85□□□□□ -1.31
RPL35BP0CX85 ATP2YJR121W 1536 nt6.84□□□□□ -1.31
RPL35BP0CX85 PET18YCR020C 648 nt6.83□□□□□ -1.32
RPL35BP0CX85 YCR061WYCR061W 1896 nt6.83□□□□□ -1.32
RPL35BP0CX85 CIR2YOR356W 1896 nt6.81□□□□□ -1.32
RPL35BP0CX85 GGC1YDL198C 903 nt6.81□□□□□ -1.32
RPL35BP0CX85 PUP3YER094C 618 nt6.81□□□□□ -1.32
RPL35BP0CX85 BXI1YNL305C 894 nt6.81□□□□□ -1.32
RPL35BP0CX85 RHO1YPR165W 630 nt6.81□□□□□ -1.32
RPL35BP0CX85 CKI1YLR133W 1749 nt6.81□□□□□ -1.32
RPL35BP0CX85 CBK1YNL161W 2271 nt6.8□□□□□ -1.32
RPL35BP0CX85 YIL108WYIL108W 2091 nt6.8□□□□□ -1.32
RPL35BP0CX85 CTF3YLR381W 2202 nt6.8□□□□□ -1.32
RPL35BP0CX85 AAT1YKL106W 1356 nt6.8□□□□□ -1.32
RPL35BP0CX85 snR86snR86 1004 nt6.78□□□□□ -1.32
RPL35BP0CX85 TDH1YJL052W 999 nt6.78□□□□□ -1.32
RPL35BP0CX85 MGM101YJR144W 810 nt6.78□□□□□ -1.32
RPL35BP0CX85 PRE10YOR362C 867 nt6.78□□□□□ -1.32
RPL35BP0CX85 RPS6AYPL090C 711 nt6.78□□□□□ -1.32
RPL35BP0CX85 RPS6BYBR181C 711 nt6.78□□□□□ -1.32
RPL35BP0CX85 YOS9YDR057W 1629 nt6.78□□□□□ -1.32
RPL35BP0CX85 NBA1YOL070C 1506 nt6.77□□□□□ -1.33
RPL35BP0CX85 RCF1YML030W 480 nt6.77□□□□□ -1.33
RPL35BP0CX85 ADH6YMR318C 1083 nt6.77□□□□□ -1.33
RPL35BP0CX85 NMD5YJR132W 3147 nt6.76□□□□□ -1.33
RPL35BP0CX85 TIM50YPL063W 1431 nt6.76□□□□□ -1.33
RPL35BP0CX85 ASN2YGR124W 1719 nt6.76□□□□□ -1.33
RPL35BP0CX85 MSB3YNL293W 1902 nt6.76□□□□□ -1.33
RPL35BP0CX85 EDC2YER035W 438 nt6.76□□□□□ -1.33
RPL35BP0CX85 ELP4YPL101W 1371 nt6.76□□□□□ -1.33
RPL35BP0CX85 EHT1YBR177C 1356 nt6.76□□□□□ -1.33
RPL35BP0CX85 THI73YLR004C 1572 nt6.76□□□□□ -1.33
RPL35BP0CX85 UTR5YEL035C 501 nt6.75□□□□□ -1.33
RPL35BP0CX85 YGR137WYGR137W 375 nt6.75□□□□□ -1.33
RPL35BP0CX85 HAL5YJL165C 2568 nt6.73□□□□□ -1.33
RPL35BP0CX85 NDE2YDL085W 1638 nt6.73□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 47.7 ms