Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 PNS1YOR161C 1620 nt12.4□□□□□ -0.42
TY2B-LR1P0C2J3 PUP3YER094C 618 nt12.39□□□□□ -0.43
TY2B-LR1P0C2J3 OLA1YBR025C 1185 nt12.38□□□□□ -0.43
TY2B-LR1P0C2J3 CPT1YNL130C 1182 nt12.36□□□□□ -0.43
TY2B-LR1P0C2J3 YBL111CYBL111C 2004 nt12.36□□□□□ -0.43
TY2B-LR1P0C2J3 AVO2YMR068W 1281 nt12.34□□□□□ -0.43
TY2B-LR1P0C2J3 RPD3YNL330C 1302 nt12.34□□□□□ -0.43
TY2B-LR1P0C2J3 MUP1YGR055W 1725 nt12.33□□□□□ -0.44
TY2B-LR1P0C2J3 ZIM17YNL310C 525 nt12.32□□□□□ -0.44
TY2B-LR1P0C2J3 MCH5YOR306C 1566 nt12.32□□□□□ -0.44
TY2B-LR1P0C2J3 CST26YBR042C 1194 nt12.31□□□□□ -0.44
TY2B-LR1P0C2J3 MEP1YGR121C 1479 nt12.31□□□□□ -0.44
TY2B-LR1P0C2J3 GGA2YHR108W 1758 nt12.3□□□□□ -0.44
TY2B-LR1P0C2J3 JHD1YER051W 1479 nt12.29□□□□□ -0.44
TY2B-LR1P0C2J3 GPM1YKL152C 744 nt12.28□□□□□ -0.44
TY2B-LR1P0C2J3 ADH6YMR318C 1083 nt12.28□□□□□ -0.44
TY2B-LR1P0C2J3 AAC3YBR085W 924 nt12.28□□□□□ -0.44
TY2B-LR1P0C2J3 SGA1YIL099W 1650 nt12.27□□□□□ -0.45
TY2B-LR1P0C2J3 RPC31YNL151C 756 nt12.25□□□□□ -0.45
TY2B-LR1P0C2J3 GAL83YER027C 1254 nt12.25□□□□□ -0.45
TY2B-LR1P0C2J3 HXT8YJL214W 1710 nt12.24□□□□□ -0.45
TY2B-LR1P0C2J3 YDR510C-AYDR510C-A 117 nt12.23□□□□□ -0.45
TY2B-LR1P0C2J3 TIM50YPL063W 1431 nt12.23□□□□□ -0.45
TY2B-LR1P0C2J3 PMP3YDR276C 168 nt12.23□□□□□ -0.45
TY2B-LR1P0C2J3 YPQ1YOL092W 927 nt12.2□□□□□ -0.46
TY2B-LR1P0C2J3 ZAP1YJL056C 2643 nt12.2□□□□□ -0.46
TY2B-LR1P0C2J3 TMS1YDR105C 1422 nt12.19□□□□□ -0.46
TY2B-LR1P0C2J3 YIR035CYIR035C 765 nt12.18□□□□□ -0.46
TY2B-LR1P0C2J3 YJL009WYJL009W 327 nt12.17□□□□□ -0.46
TY2B-LR1P0C2J3 PDA1YER178W 1263 nt12.16□□□□□ -0.46
TY2B-LR1P0C2J3 AIM46YHR199C 933 nt12.16□□□□□ -0.46
TY2B-LR1P0C2J3 SPT20YOL148C 1815 nt12.16□□□□□ -0.46
TY2B-LR1P0C2J3 HOL1YNR055C 1761 nt12.16□□□□□ -0.46
TY2B-LR1P0C2J3 CRN1YLR429W 1956 nt12.15□□□□□ -0.46
TY2B-LR1P0C2J3 MBF1YOR298C-A 456 nt12.15□□□□□ -0.46
TY2B-LR1P0C2J3 PLB3YOL011W 2061 nt12.15□□□□□ -0.46
TY2B-LR1P0C2J3 SSL2YIL143C 2532 nt12.15□□□□□ -0.46
TY2B-LR1P0C2J3 UGP1YKL035W 1500 nt12.14□□□□□ -0.47
TY2B-LR1P0C2J3 TRR2YHR106W 1029 nt12.14□□□□□ -0.47
TY2B-LR1P0C2J3 POR2YIL114C 846 nt12.11□□□□□ -0.47
TY2B-LR1P0C2J3 DPL1YDR294C 1770 nt12.11□□□□□ -0.47
TY2B-LR1P0C2J3 PRE10YOR362C 867 nt12.09□□□□□ -0.47
TY2B-LR1P0C2J3 YDR467CYDR467C 327 nt12.08□□□□□ -0.48
TY2B-LR1P0C2J3 LDB7YBL006C 543 nt12.08□□□□□ -0.48
TY2B-LR1P0C2J3 BUB2YMR055C 921 nt12.08□□□□□ -0.48
TY2B-LR1P0C2J3 MCP1YOR228C 909 nt12.08□□□□□ -0.48
TY2B-LR1P0C2J3 CWP2YKL096W-A 279 nt12.07□□□□□ -0.48
TY2B-LR1P0C2J3 YHR218WYHR218W 1812 nt12.06□□□□□ -0.48
TY2B-LR1P0C2J3 BIO3YNR058W 1443 nt12.06□□□□□ -0.48
TY2B-LR1P0C2J3 YML034C-AYML034C-A 399 nt12.05□□□□□ -0.48
TY2B-LR1P0C2J3 ODC1YPL134C 933 nt12.05□□□□□ -0.48
TY2B-LR1P0C2J3 YBR056WYBR056W 1506 nt12.05□□□□□ -0.48
TY2B-LR1P0C2J3 PMU1YKL128C 888 nt12.05□□□□□ -0.48
TY2B-LR1P0C2J3 CKI1YLR133W 1749 nt12.04□□□□□ -0.48
TY2B-LR1P0C2J3 MPH3YJR160C 1809 nt12.04□□□□□ -0.48
TY2B-LR1P0C2J3 YGL081WYGL081W 963 nt12.03□□□□□ -0.48
TY2B-LR1P0C2J3 NMA2YGR010W 1188 nt12.03□□□□□ -0.48
TY2B-LR1P0C2J3 YJR142WYJR142W 1029 nt12.03□□□□□ -0.48
TY2B-LR1P0C2J3 CDC3YLR314C 1563 nt12.03□□□□□ -0.48
TY2B-LR1P0C2J3 PTH2YBL057C 627 nt12.02□□□□□ -0.48
TY2B-LR1P0C2J3 YMC2YBR104W 990 nt12.02□□□□□ -0.48
TY2B-LR1P0C2J3 ARO3YDR035W 1113 nt12□□□□□ -0.49
TY2B-LR1P0C2J3 LRO1YNR008W 1986 nt12□□□□□ -0.49
TY2B-LR1P0C2J3 SPS1YDR523C 1473 nt12□□□□□ -0.49
TY2B-LR1P0C2J3 AIM20YIL158W 615 nt11.99□□□□□ -0.49
TY2B-LR1P0C2J3 LEU4YNL104C 1860 nt11.99□□□□□ -0.49
TY2B-LR1P0C2J3 tE(CUC)DtE(CUC)D 72 nt11.98□□□□□ -0.49
TY2B-LR1P0C2J3 tE(CUC)ItE(CUC)I 72 nt11.98□□□□□ -0.49
TY2B-LR1P0C2J3 MRS4YKR052C 915 nt11.98□□□□□ -0.49
TY2B-LR1P0C2J3 ARG7YMR062C 1326 nt11.97□□□□□ -0.49
TY2B-LR1P0C2J3 YPL067CYPL067C 597 nt11.97□□□□□ -0.49
TY2B-LR1P0C2J3 ERV2YPR037C 591 nt11.97□□□□□ -0.49
TY2B-LR1P0C2J3 YER152CYER152C 1332 nt11.96□□□□□ -0.49
TY2B-LR1P0C2J3 ALG7YBR243C 1347 nt11.96□□□□□ -0.49
TY2B-LR1P0C2J3 PSA1YDL055C 1086 nt11.96□□□□□ -0.49
TY2B-LR1P0C2J3 YLR184WYLR184W 348 nt11.95□□□□□ -0.5
TY2B-LR1P0C2J3 LGE1YPL055C 999 nt11.95□□□□□ -0.5
TY2B-LR1P0C2J3 PRS4YBL068W 981 nt11.93□□□□□ -0.5
TY2B-LR1P0C2J3 snR86snR86 1004 nt11.92□□□□□ -0.5
TY2B-LR1P0C2J3 OSM1YJR051W 1506 nt11.91□□□□□ -0.5
TY2B-LR1P0C2J3 TPN1YGL186C 1740 nt11.9□□□□□ -0.5
TY2B-LR1P0C2J3 CYS4YGR155W 1524 nt11.9□□□□□ -0.5
TY2B-LR1P0C2J3 TES1YJR019C 1050 nt11.9□□□□□ -0.51
TY2B-LR1P0C2J3 AAT1YKL106W 1356 nt11.89□□□□□ -0.51
TY2B-LR1P0C2J3 AGP3YFL055W 1677 nt11.88□□□□□ -0.51
TY2B-LR1P0C2J3 BUD31YCR063W 474 nt11.87□□□□□ -0.51
TY2B-LR1P0C2J3 RCF1YML030W 480 nt11.87□□□□□ -0.51
TY2B-LR1P0C2J3 AAD14YNL331C 1131 nt11.87□□□□□ -0.51
TY2B-LR1P0C2J3 MSI1YBR195C 1269 nt11.87□□□□□ -0.51
TY2B-LR1P0C2J3 EHT1YBR177C 1356 nt11.86□□□□□ -0.51
TY2B-LR1P0C2J3 MDM35YKL053C-A 261 nt11.86□□□□□ -0.51
TY2B-LR1P0C2J3 DIP5YPL265W 1827 nt11.86□□□□□ -0.51
TY2B-LR1P0C2J3 IMD1YAR073W 1212 nt11.85□□□□□ -0.51
TY2B-LR1P0C2J3 ERG10YPL028W 1197 nt11.83□□□□□ -0.52
TY2B-LR1P0C2J3 MDH1YKL085W 1005 nt11.82□□□□□ -0.52
TY2B-LR1P0C2J3 SUN4YNL066W 1263 nt11.82□□□□□ -0.52
TY2B-LR1P0C2J3 snR30snR30 606 nt11.82□□□□□ -0.52
TY2B-LR1P0C2J3 YMR074CYMR074C 438 nt11.81□□□□□ -0.52
TY2B-LR1P0C2J3 STS1YIR011C 960 nt11.8□□□□□ -0.52
TY2B-LR1P0C2J3 DPM1YPR183W 804 nt11.8□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 248.6 ms