Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 AC087499.1-201ENST00000418141 1075 ntBASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAP47Q5SQN1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 AP006587.1-201ENST00000534129 1502 ntBASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 CR392000.1-201ENST00000624770 1228 ntBASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAP47Q5SQN1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.02■□□□□ 0.63
SNAP47Q5SQN1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.02■□□□□ 0.63
SNAP47Q5SQN1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNAP47Q5SQN1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 KRT18P21-201ENST00000515767 1272 ntBASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNAP47Q5SQN1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAP47Q5SQN1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAP47Q5SQN1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAP47Q5SQN1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNAP47Q5SQN1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNAP47Q5SQN1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAP47Q5SQN1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAP47Q5SQN1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SNAP47Q5SQN1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms