Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm24376-201ENSMUST00000104399 127 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm24587-201ENSMUST00000116697 89 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm23783-201ENSMUST00000157941 102 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm22516-201ENSMUST00000158266 124 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm23208-201ENSMUST00000158666 127 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm24681-201ENSMUST00000158760 107 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm25297-201ENSMUST00000175490 67 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm27688-201ENSMUST00000183634 91 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Mir7050-201ENSMUST00000184636 60 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm27492-201ENSMUST00000185194 187 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm37343-201ENSMUST00000192542 111 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Mir3069-201ENSMUST00000198802 65 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm44485-201ENSMUST00000199569 137 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm44589-201ENSMUST00000207025 115 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm11360-201ENSMUST00000221898 262 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm24538-201ENSMUST00000082612 107 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Snora52-201ENSMUST00000082732 137 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 n-R5s166-201ENSMUST00000082898 121 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm24920-201ENSMUST00000083018 85 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm23508-201ENSMUST00000083079 72 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Mir20a-201ENSMUST00000083508 107 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Mir194-1-201ENSMUST00000083647 67 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Gm22154-201ENSMUST00000083844 131 ntBASIC0.66□□□□□ -2.3
Gm4559A4IF42 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
Gm4559A4IF42 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.3
Gm4559A4IF42 Gm5182-201ENSMUST00000217708 6092 ntBASIC0.65□□□□□ -2.3
Gm4559A4IF42 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC0.65□□□□□ -2.31
Gm4559A4IF42 Gm23014-201ENSMUST00000104144 130 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Gm23481-201ENSMUST00000104173 131 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Gm22497-201ENSMUST00000104499 131 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Gm25438-201ENSMUST00000158281 110 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Scarna10-201ENSMUST00000158992 325 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Gm26219-201ENSMUST00000175216 71 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Gm22466-201ENSMUST00000175278 69 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Gm25198-201ENSMUST00000178574 110 ntBASIC0.65□□□□□ -2.31
Gm4559A4IF42 Mir713-201ENSMUST00000178651 108 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 215.7 ms