RNA–Protein interactions for RNA: ENSMUST00000034766.13

Rora-201, Transcript of Nuclear receptor ROR-alpha, mousemouse

TSL 1 (best) BASIC

Gene Rora, Length 10,878 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rora-201ENSMUST00000034766 Rpgrip1Q9EPQ2 1331 aa15.55■□□□□ 0.08
Rora-201ENSMUST00000034766 Las1lA2BE28 776 aaKnown RBP14.9□□□□□ -0.02
Rora-201ENSMUST00000034766 Cngb1E1AZ71 1325 aa14.88□□□□□ -0.03
Rora-201ENSMUST00000034766 Pelp1Q9DBD5 1123 aaKnown RBP14.52□□□□□ -0.09
Rora-201ENSMUST00000034766 Myt1Q8CFC2 1127 aa14.5□□□□□ -0.09
Rora-201ENSMUST00000034766 Rtl1Q7M732 1744 aa14.21□□□□□ -0.14
Rora-201ENSMUST00000034766 Rhox8Q6VSS7 320 aa14.07□□□□□ -0.16
Rora-201ENSMUST00000034766 Wdr66E9Q743 1299 aa13.9□□□□□ -0.18
Rora-201ENSMUST00000034766 CenpbP27790 599 aa13.8□□□□□ -0.2
Rora-201ENSMUST00000034766 Ccdc180J3QNE4 1664 aa13.76□□□□□ -0.21
Rora-201ENSMUST00000034766 Amer1Q7TS75 1132 aa13.64□□□□□ -0.23
Rora-201ENSMUST00000034766 Stra8P70278 393 aa13.62□□□□□ -0.23
Rora-201ENSMUST00000034766 Rtl5Q5DTT4 599 aa13.55□□□□□ -0.24
Rora-201ENSMUST00000034766 Acin1Q9JIX8 1338 aaKnown RBP13.44□□□□□ -0.26
Rora-201ENSMUST00000034766 4930567H17RikQ3V0K5 233 aa13.41□□□□□ -0.26
Rora-201ENSMUST00000034766 NefmP08553 848 aa13.4□□□□□ -0.26
Rora-201ENSMUST00000034766 Tnnt3Q9QZ47 272 aa13.3□□□□□ -0.28
Rora-201ENSMUST00000034766 DiexfQ8BTT6 772 aaKnown RBP13.05□□□□□ -0.32
Rora-201ENSMUST00000034766 Ccdc9Q8VC31 543 aaKnown RBP13.03□□□□□ -0.32
Rora-201ENSMUST00000034766 Neurod1Q60867 357 aa13.02□□□□□ -0.33
Rora-201ENSMUST00000034766 Cdk11bP24788 784 aaKnown RBP12.91□□□□□ -0.34
Rora-201ENSMUST00000034766 HrcG5E8J6 738 aa12.89□□□□□ -0.35
Rora-201ENSMUST00000034766 Trim41Q5NCC3 630 aa12.85□□□□□ -0.35
Rora-201ENSMUST00000034766 Zeb1Q64318 1117 aa12.83□□□□□ -0.36
Rora-201ENSMUST00000034766 Pcgf6Q99NA9 353 aa12.79□□□□□ -0.36
Rora-201ENSMUST00000034766 Ythdc1E9Q5K9 736 aaKnown RBP12.77□□□□□ -0.37
Rora-201ENSMUST00000034766 NischQ80TM9 1593 aa12.76□□□□□ -0.37
Rora-201ENSMUST00000034766 NeflP08551 543 aa12.67□□□□□ -0.38
Rora-201ENSMUST00000034766 4933416C03RikQ3V063 378 aa12.66□□□□□ -0.38
Rora-201ENSMUST00000034766 Anp32bQ9EST5 272 aaKnown RBP12.63□□□□□ -0.39
Rora-201ENSMUST00000034766 Anp32aO35381 247 aa12.62□□□□□ -0.39
Rora-201ENSMUST00000034766 Nop58Q6DFW4 536 aaKnown RBP12.6□□□□□ -0.39
Rora-201ENSMUST00000034766 Aplp2Q06335 707 aa12.6□□□□□ -0.39
Rora-201ENSMUST00000034766 Myt1lP97500 1187 aa12.56□□□□□ -0.4
Rora-201ENSMUST00000034766 Ehmt2Q9Z148 1263 aaKnown RBP12.49□□□□□ -0.41
Rora-201ENSMUST00000034766 Dcaf1Q80TR8 1506 aa12.47□□□□□ -0.41
Rora-201ENSMUST00000034766 Anks4bQ8K3X6 423 aa12.45□□□□□ -0.42
Rora-201ENSMUST00000034766 NrdcQ8BHG1 1161 aa12.45□□□□□ -0.42
Rora-201ENSMUST00000034766 ClspnQ80YR7 1315 aa12.4□□□□□ -0.42
Rora-201ENSMUST00000034766 Ube2uB1AUC4 352 aa12.39□□□□□ -0.43
Rora-201ENSMUST00000034766 Supt5hO55201 1082 aaKnown RBP12.34□□□□□ -0.43
Rora-201ENSMUST00000034766 Ttbk1Q6PCN3 1308 aa12.31□□□□□ -0.44
Rora-201ENSMUST00000034766 Eif5bQ05D44 1216 aaKnown RBP12.3□□□□□ -0.44
Rora-201ENSMUST00000034766 Esf1Q3V1V3 845 aaKnown RBP12.29□□□□□ -0.44
Rora-201ENSMUST00000034766 Npm2Q80W85 207 aa12.26□□□□□ -0.45
Rora-201ENSMUST00000034766 TonslQ6NZL6 1363 aa12.24□□□□□ -0.45
Rora-201ENSMUST00000034766 Upf2A2AT37 1269 aaKnown RBP12.24□□□□□ -0.45
Rora-201ENSMUST00000034766 Ccdc136Q3TVA9 1136 aa12.18□□□□□ -0.46
Rora-201ENSMUST00000034766 Hsp90aa1P07901 733 aaKnown RBP12.14□□□□□ -0.47
Rora-201ENSMUST00000034766 Hdac5Q9Z2V6 1113 aa12.13□□□□□ -0.47
Rora-201ENSMUST00000034766 DaxxO35613 739 aa12.13□□□□□ -0.47
Rora-201ENSMUST00000034766 Adam1bQ8R534 806 aa12.07□□□□□ -0.48
Rora-201ENSMUST00000034766 Ccdc27Q3V036 639 aa12.06□□□□□ -0.48
Rora-201ENSMUST00000034766 NclP09405 707 aaKnown RBP12.05□□□□□ -0.48
Rora-201ENSMUST00000034766 Ccer2J3QPU5 274 aa12.04□□□□□ -0.48
Rora-201ENSMUST00000034766 UbtfP25976 765 aaKnown RBP12.03□□□□□ -0.48
Rora-201ENSMUST00000034766 4933402E13RikQ9D4D2 429 aa12.02□□□□□ -0.48
Rora-201ENSMUST00000034766 Gab3Q8BSM5 595 aa12.01□□□□□ -0.49
Rora-201ENSMUST00000034766 Abcc9P70170 1546 aa12□□□□□ -0.49
Rora-201ENSMUST00000034766 Htatsf1Q8BGC0 757 aa11.97□□□□□ -0.49
Rora-201ENSMUST00000034766 Cep164Q5DU05 1446 aa11.96□□□□□ -0.5
Rora-201ENSMUST00000034766 Irx3P81067 507 aa11.96□□□□□ -0.5
Rora-201ENSMUST00000034766 CatipB9EKE5 520 aa11.94□□□□□ -0.5
Rora-201ENSMUST00000034766 Trim44Q9QXA7 346 aa11.92□□□□□ -0.5
Rora-201ENSMUST00000034766 Bcl11aQ9QYE3 773 aa11.92□□□□□ -0.5
Rora-201ENSMUST00000034766 Slc24a1Q91WD8 1130 aa11.92□□□□□ -0.5
Rora-201ENSMUST00000034766 Wdr43Q6ZQL4 677 aaKnown RBP11.89□□□□□ -0.51
Rora-201ENSMUST00000034766 AU015836B2RUM3 263 aa11.88□□□□□ -0.51
Rora-201ENSMUST00000034766 Calr4Q3TQS0 420 aa11.86□□□□□ -0.51
Rora-201ENSMUST00000034766 Tnnt2P50752 301 aa11.83□□□□□ -0.52
Rora-201ENSMUST00000034766 Polr3glQ8R0C0 218 aa11.81□□□□□ -0.52
Rora-201ENSMUST00000034766 Ppm1gQ61074 542 aa11.79□□□□□ -0.52
Rora-201ENSMUST00000034766 Mier1Q5UAK0 511 aa11.78□□□□□ -0.52
Rora-201ENSMUST00000034766 PtmsQ9D0J8 101 aaKnown RBP11.78□□□□□ -0.52
Rora-201ENSMUST00000034766 Csrnp3P59055 597 aa11.78□□□□□ -0.52
Rora-201ENSMUST00000034766 Mbd3Q9Z2D8 285 aaKnown RBP11.78□□□□□ -0.52
Rora-201ENSMUST00000034766 Map7d2A2AG50 781 aa11.78□□□□□ -0.52
Rora-201ENSMUST00000034766 Calcoco2A2A6M5 331 aa11.74□□□□□ -0.53
Rora-201ENSMUST00000034766 1700123L14RikQ3V2K7 440 aa11.72□□□□□ -0.53
Rora-201ENSMUST00000034766 Chmp4bQ9D8B3 224 aaKnown RBP11.67□□□□□ -0.54
Rora-201ENSMUST00000034766 Brd4Q9ESU6 1400 aaKnown RBP11.66□□□□□ -0.54
Rora-201ENSMUST00000034766 Znf316Q6PGE4 1016 aa11.66□□□□□ -0.54
Rora-201ENSMUST00000034766 Arid4bA2CG63 1314 aaKnown RBP11.64□□□□□ -0.55
Rora-201ENSMUST00000034766 Ddrgk1Q80WW9 315 aa11.63□□□□□ -0.55
Rora-201ENSMUST00000034766 Fam50aQ9WV03 339 aaKnown RBP11.63□□□□□ -0.55
Rora-201ENSMUST00000034766 Ppp4r2Q0VGB7 417 aa11.62□□□□□ -0.55
Rora-201ENSMUST00000034766 BccipQ9CWI3 316 aa11.62□□□□□ -0.55
Rora-201ENSMUST00000034766 Rrp12Q6P5B0 1295 aaKnown RBP11.62□□□□□ -0.55
Rora-201ENSMUST00000034766 Gm35339A0A140LHH9 1649 aa11.58□□□□□ -0.56
Rora-201ENSMUST00000034766 Gm973E9Q295 1059 aa11.56□□□□□ -0.56
Rora-201ENSMUST00000034766 Sall2Q9QX96 1004 aa11.56□□□□□ -0.56
Rora-201ENSMUST00000034766 MsnP26041 577 aaKnown RBP11.55□□□□□ -0.56
Rora-201ENSMUST00000034766 CalrP14211 416 aaKnown RBP11.54□□□□□ -0.56
Rora-201ENSMUST00000034766 CanxP35564 591 aaKnown RBP11.54□□□□□ -0.56
Rora-201ENSMUST00000034766 Rangap1P46061 589 aaKnown RBP11.54□□□□□ -0.56
Rora-201ENSMUST00000034766 Zcchc6Q5BLK4 1491 aaKnown RBP11.54□□□□□ -0.56
Rora-201ENSMUST00000034766 Eea1Q8BL66 1411 aa11.54□□□□□ -0.56
Rora-201ENSMUST00000034766 Fam71e1A1L3C1 212 aa11.53□□□□□ -0.56
Rora-201ENSMUST00000034766 Map7O88735 730 aa11.53□□□□□ -0.56
Rora-201ENSMUST00000034766 Pknox2Q8BG99 474 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms