Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.01■□□□□ 0.95
LINC00271P0C7V0 FP700111.2-201ENST00000619190 1892 ntBASIC21.01■□□□□ 0.95
LINC00271P0C7V0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21■□□□□ 0.95
LINC00271P0C7V0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LINC00271P0C7V0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LINC00271P0C7V0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LINC00271P0C7V0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
LINC00271P0C7V0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21■□□□□ 0.95
LINC00271P0C7V0 Z85996.1-201ENST00000494644 937 ntBASIC21■□□□□ 0.95
LINC00271P0C7V0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21■□□□□ 0.95
LINC00271P0C7V0 LINC01238-205ENST00000567549 1107 ntBASIC21■□□□□ 0.95
LINC00271P0C7V0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21■□□□□ 0.95
LINC00271P0C7V0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21■□□□□ 0.95
LINC00271P0C7V0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21■□□□□ 0.95
LINC00271P0C7V0 AL023803.3-201ENST00000615559 522 ntBASIC21■□□□□ 0.95
LINC00271P0C7V0 AC116562.4-202ENST00000641738 218 ntBASIC21■□□□□ 0.95
LINC00271P0C7V0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21■□□□□ 0.95
LINC00271P0C7V0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00271P0C7V0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
LINC00271P0C7V0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
LINC00271P0C7V0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 KRT16P6-202ENST00000425692 1426 ntBASIC20.99■□□□□ 0.95
LINC00271P0C7V0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 TSPY5P-201ENST00000426936 936 ntBASIC20.99■□□□□ 0.95
LINC00271P0C7V0 SLC25A1P2-201ENST00000430693 912 ntBASIC20.99■□□□□ 0.95
LINC00271P0C7V0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 AC010653.2-201ENST00000623505 997 ntBASIC20.99■□□□□ 0.95
LINC00271P0C7V0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.99■□□□□ 0.95
LINC00271P0C7V0 EP400NL-214ENST00000641289 2402 ntBASIC20.99■□□□□ 0.95
LINC00271P0C7V0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00271P0C7V0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 PHGDH-210ENST00000641115 1638 ntBASIC20.97■□□□□ 0.95
LINC00271P0C7V0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 AC009947.2-201ENST00000444014 672 ntBASIC20.97■□□□□ 0.95
LINC00271P0C7V0 FAM207BP-201ENST00000447172 505 ntBASIC20.97■□□□□ 0.95
LINC00271P0C7V0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 FAM86EP-206ENST00000510506 987 ntBASIC20.97■□□□□ 0.95
LINC00271P0C7V0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00271P0C7V0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 COX11P1-201ENST00000489116 835 ntBASIC20.96■□□□□ 0.95
LINC00271P0C7V0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 AL121894.2-201ENST00000602977 491 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms