Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SH3TC1Q8TE82 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 AC145285.6-201ENST00000604632 637 ntBASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 MIR6786-201ENST00000616843 113 ntBASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SH3TC1Q8TE82 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 MIR1238-201ENST00000408483 83 ntBASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SH3TC1Q8TE82 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 AC018553.1-201ENST00000616682 1458 ntBASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.77■■□□□ 1.56
SH3TC1Q8TE82 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 YBX1P10-201ENST00000444752 975 ntBASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.76■■□□□ 1.55
SH3TC1Q8TE82 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 FITM1-202ENST00000559294 800 ntBASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.75■■□□□ 1.55
SH3TC1Q8TE82 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 AL390955.1-201ENST00000428694 934 ntBASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms