Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 AC008040.2-201ENST00000461049 708 ntBASIC21.16■□□□□ 0.98
LINC00271P0C7V0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 AC022616.7-201ENST00000525383 220 ntBASIC21.16■□□□□ 0.98
LINC00271P0C7V0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 AC117947.1-201ENST00000427448 529 ntBASIC21.15■□□□□ 0.98
LINC00271P0C7V0 LIN28AP1-201ENST00000429574 405 ntBASIC21.15■□□□□ 0.98
LINC00271P0C7V0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 AC130371.2-201ENST00000619443 611 ntBASIC21.15■□□□□ 0.98
LINC00271P0C7V0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00271P0C7V0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00271P0C7V0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00271P0C7V0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 CRYGFP-201ENST00000418459 633 ntBASIC21.14■□□□□ 0.97
LINC00271P0C7V0 BX664615.1-201ENST00000443558 458 ntBASIC21.14■□□□□ 0.97
LINC00271P0C7V0 YBX1P10-201ENST00000444752 975 ntBASIC21.14■□□□□ 0.97
LINC00271P0C7V0 ATP5G1P1-201ENST00000448724 379 ntBASIC21.14■□□□□ 0.97
LINC00271P0C7V0 AC091390.4-202ENST00000476426 537 ntBASIC21.14■□□□□ 0.97
LINC00271P0C7V0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 AP000692.2-201ENST00000608391 879 ntBASIC21.14■□□□□ 0.97
LINC00271P0C7V0 AL138966.2-201ENST00000621997 464 ntBASIC21.14■□□□□ 0.97
LINC00271P0C7V0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.14■□□□□ 0.97
LINC00271P0C7V0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 AK4P3-201ENST00000418260 669 ntBASIC21.13■□□□□ 0.97
LINC00271P0C7V0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 AL358472.4-201ENST00000633140 710 ntBASIC21.13■□□□□ 0.97
LINC00271P0C7V0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00271P0C7V0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 FBXW4P1-201ENST00000426721 2239 ntBASIC21.12■□□□□ 0.97
LINC00271P0C7V0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00271P0C7V0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 FAM8A6P-201ENST00000407496 1135 ntBASIC21.11■□□□□ 0.97
LINC00271P0C7V0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00271P0C7V0 RCC2P6-201ENST00000526625 1557 ntBASIC21.1■□□□□ 0.97
LINC00271P0C7V0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00271P0C7V0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
LINC00271P0C7V0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms