Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LDB2O43679 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB2O43679 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.91■□□□□ 0.78
LDB2O43679 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB2O43679 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB2O43679 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB2O43679 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LDB2O43679 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB2O43679 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB2O43679 PHGDH-210ENST00000641115 1638 ntBASIC19.91■□□□□ 0.78
LDB2O43679 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.9■□□□□ 0.78
LDB2O43679 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.9■□□□□ 0.78
LDB2O43679 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.9■□□□□ 0.78
LDB2O43679 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.9■□□□□ 0.78
LDB2O43679 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.9■□□□□ 0.78
LDB2O43679 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LDB2O43679 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.9■□□□□ 0.78
LDB2O43679 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LDB2O43679 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.9■□□□□ 0.78
LDB2O43679 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB2O43679 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LDB2O43679 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LDB2O43679 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LDB2O43679 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 AL390719.1-204ENST00000412397 1219 ntBASIC19.89■□□□□ 0.77
LDB2O43679 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LDB2O43679 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.89■□□□□ 0.77
LDB2O43679 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.89■□□□□ 0.77
LDB2O43679 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.89■□□□□ 0.77
LDB2O43679 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.89■□□□□ 0.77
LDB2O43679 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.89■□□□□ 0.77
LDB2O43679 AC092368.3-202ENST00000574180 1591 ntBASIC19.89■□□□□ 0.77
LDB2O43679 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.89■□□□□ 0.77
LDB2O43679 AC060766.5-201ENST00000590539 871 ntBASIC19.89■□□□□ 0.77
LDB2O43679 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB2O43679 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.89■□□□□ 0.77
LDB2O43679 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.88■□□□□ 0.77
LDB2O43679 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.88■□□□□ 0.77
LDB2O43679 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.88■□□□□ 0.77
LDB2O43679 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.88■□□□□ 0.77
LDB2O43679 PNMA6B-201ENST00000538162 1200 ntBASIC19.88■□□□□ 0.77
LDB2O43679 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.88■□□□□ 0.77
LDB2O43679 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 AC006557.6-201ENST00000623071 864 ntBASIC19.88■□□□□ 0.77
LDB2O43679 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB2O43679 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LDB2O43679 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.88■□□□□ 0.77
LDB2O43679 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms