Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AC073508.3-201ENST00000619697 1419 ntBASIC23.83■■□□□ 1.4
PCDHAC2Q9Y5I4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.83■■□□□ 1.4
PCDHAC2Q9Y5I4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
PCDHAC2Q9Y5I4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHAC2Q9Y5I4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 DPP3P2-201ENST00000416030 1696 ntBASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 NAPSB-206ENST00000562112 1266 ntBASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHAC2Q9Y5I4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHAC2Q9Y5I4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 AC104076.2-201ENST00000448912 469 ntBASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHAC2Q9Y5I4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 AC010203.1-204ENST00000548782 407 ntBASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHAC2Q9Y5I4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 SLC25A3P1-201ENST00000443844 931 ntBASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 C1QL1P1-201ENST00000568105 661 ntBASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHAC2Q9Y5I4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms