Protein–RNA interactions for Protein: Q99337

TY1B-NL2, Transposon Ty1-NL2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL2Q99337 YOL013W-BYOL013W-B 291 nt-2.71□□□□□ -2.84
TY1B-NL2Q99337 YOR381W-AYOR381W-A 168 nt-2.71□□□□□ -2.84
TY1B-NL2Q99337 YMR001C-AYMR001C-A 231 nt-2.72□□□□□ -2.84
TY1B-NL2Q99337 YLR406C-AYLR406C-A 150 nt-2.73□□□□□ -2.85
TY1B-NL2Q99337 YAL016C-BYAL016C-B 186 nt-2.75□□□□□ -2.85
TY1B-NL2Q99337 YHR180C-BYHR180C-B 105 nt-2.76□□□□□ -2.85
TY1B-NL2Q99337 YLR412C-AYLR412C-A 207 nt-2.76□□□□□ -2.85
TY1B-NL2Q99337 snR41snR41 95 nt-2.76□□□□□ -2.85
TY1B-NL2Q99337 YAL066WYAL066W 309 nt-2.79□□□□□ -2.86
TY1B-NL2Q99337 YEL014CYEL014C 306 nt-2.82□□□□□ -2.86
TY1B-NL2Q99337 YOR329W-AYOR329W-A 210 nt-2.82□□□□□ -2.86
TY1B-NL2Q99337 YGL041CYGL041C 204 nt-2.82□□□□□ -2.86
TY1B-NL2Q99337 YLR434CYLR434C 384 nt-2.82□□□□□ -2.86
TY1B-NL2Q99337 snR55snR55 98 nt-2.83□□□□□ -2.86
TY1B-NL2Q99337 YLR299C-AYLR299C-A 93 nt-2.83□□□□□ -2.86
TY1B-NL2Q99337 snR78snR78 87 nt-2.85□□□□□ -2.87
TY1B-NL2Q99337 YLR120W-AYLR120W-A 102 nt-2.86□□□□□ -2.87
TY1B-NL2Q99337 YER181CYER181C 324 nt-2.88□□□□□ -2.87
TY1B-NL2Q99337 YPR012WYPR012W 255 nt-2.88□□□□□ -2.87
TY1B-NL2Q99337 tW(UCA)QtW(UCA)Q 74 nt-2.89□□□□□ -2.87
TY1B-NL2Q99337 snR6snR6 112 nt-2.9□□□□□ -2.87
TY1B-NL2Q99337 YOL155W-AYOL155W-A 135 nt-2.98□□□□□ -2.89
TY1B-NL2Q99337 YJL047C-AYJL047C-A 135 nt-2.99□□□□□ -2.89
TY1B-NL2Q99337 YKL106C-AYKL106C-A 120 nt-2.99□□□□□ -2.89
TY1B-NL2Q99337 HTL1YCR020W-B 237 nt-3.01□□□□□ -2.89
TY1B-NL2Q99337 snR80snR80 171 nt-3.01□□□□□ -2.89
TY1B-NL2Q99337 YLR222C-AYLR222C-A 231 nt-3.02□□□□□ -2.89
TY1B-NL2Q99337 STE18YJR086W 333 nt-3.05□□□□□ -2.9
TY1B-NL2Q99337 YOL038C-AYOL038C-A 96 nt-3.06□□□□□ -2.9
TY1B-NL2Q99337 YDR524C-AYDR524C-A 120 nt-3.07□□□□□ -2.9
TY1B-NL2Q99337 snR73snR73 106 nt-3.09□□□□□ -2.9
TY1B-NL2Q99337 BIL1YOR304C-A 231 nt-3.1□□□□□ -2.91
TY1B-NL2Q99337 YOR335W-AYOR335W-A 81 nt-3.12□□□□□ -2.91
TY1B-NL2Q99337 YOR102WYOR102W 351 nt-3.13□□□□□ -2.91
TY1B-NL2Q99337 YDR413CYDR413C 576 nt-3.14□□□□□ -2.91
TY1B-NL2Q99337 YBR131C-AYBR131C-A 90 nt-3.16□□□□□ -2.91
TY1B-NL2Q99337 YNL122CYNL122C 348 nt-3.16□□□□□ -2.92
TY1B-NL2Q99337 YKL123WYKL123W 381 nt-3.22□□□□□ -2.93
TY1B-NL2Q99337 YJL150WYJL150W 303 nt-3.24□□□□□ -2.93
TY1B-NL2Q99337 YKL118WYKL118W 312 nt-3.24□□□□□ -2.93
TY1B-NL2Q99337 YBR109W-AYBR109W-A 225 nt-3.24□□□□□ -2.93
TY1B-NL2Q99337 RPL41BYDL133C-A 78 nt-3.24□□□□□ -2.93
TY1B-NL2Q99337 Q0255Q0255 1419 nt-3.27□□□□□ -2.93
TY1B-NL2Q99337 tF(GAA)QtF(GAA)Q 75 nt-3.28□□□□□ -2.93
TY1B-NL2Q99337 YGL188C-AYGL188C-A 141 nt-3.3□□□□□ -2.94
TY1B-NL2Q99337 RPL41AYDL184C 78 nt-3.3□□□□□ -2.94
TY1B-NL2Q99337 YNL198CYNL198C 303 nt-3.31□□□□□ -2.94
TY1B-NL2Q99337 snR48snR48 113 nt-3.32□□□□□ -2.94
TY1B-NL2Q99337 YDR183C-AYDR183C-A 258 nt-3.35□□□□□ -2.95
TY1B-NL2Q99337 snR38snR38 95 nt-3.35□□□□□ -2.95
TY1B-NL2Q99337 tL(UAA)QtL(UAA)Q 85 nt-3.37□□□□□ -2.95
TY1B-NL2Q99337 YBR296C-AYBR296C-A 120 nt-3.38□□□□□ -2.95
TY1B-NL2Q99337 YLR285C-AYLR285C-A 171 nt-3.39□□□□□ -2.95
TY1B-NL2Q99337 GIM4YEL003W 336 nt-3.39□□□□□ -2.95
TY1B-NL2Q99337 YAL063C-AYAL063C-A 291 nt-3.41□□□□□ -2.96
TY1B-NL2Q99337 YGR035CYGR035C 351 nt-3.44□□□□□ -2.96
TY1B-NL2Q99337 YPL038W-AYPL038W-A 192 nt-3.44□□□□□ -2.96
TY1B-NL2Q99337 YNL097C-BYNL097C-B 123 nt-3.45□□□□□ -2.96
TY1B-NL2Q99337 snR56snR56 88 nt-3.5□□□□□ -2.97
TY1B-NL2Q99337 YDR406W-AYDR406W-A 246 nt-3.51□□□□□ -2.97
TY1B-NL2Q99337 snR87snR87 109 nt-3.56□□□□□ -2.98
TY1B-NL2Q99337 tV(UAC)QtV(UAC)Q 76 nt-3.64□□□□□ -2.99
TY1B-NL2Q99337 snR85snR85 171 nt-3.69□□□□□ -3
TY1B-NL2Q99337 RPL39YJL189W 156 nt-3.7□□□□□ -3
TY1B-NL2Q99337 YNR025CYNR025C 360 nt-3.72□□□□□ -3
TY1B-NL2Q99337 YOR302WYOR302W 78 nt-3.72□□□□□ -3
TY1B-NL2Q99337 YDL114W-AYDL114W-A 114 nt-3.73□□□□□ -3.01
TY1B-NL2Q99337 YHL015W-AYHL015W-A 84 nt-3.75□□□□□ -3.01
TY1B-NL2Q99337 snR52snR52 92 nt-3.77□□□□□ -3.01
TY1B-NL2Q99337 SOM1YEL059C-A 225 nt-3.81□□□□□ -3.02
TY1B-NL2Q99337 YBL071C-BYBL071C-B 99 nt-3.81□□□□□ -3.02
TY1B-NL2Q99337 YNL277W-AYNL277W-A 189 nt-3.83□□□□□ -3.02
TY1B-NL2Q99337 YOL164W-AYOL164W-A 183 nt-3.84□□□□□ -3.02
TY1B-NL2Q99337 snR47snR47 99 nt-3.84□□□□□ -3.02
TY1B-NL2Q99337 YCR095W-AYCR095W-A 159 nt-3.91□□□□□ -3.04
TY1B-NL2Q99337 YGR151CYGR151C 336 nt-3.92□□□□□ -3.04
TY1B-NL2Q99337 snR58snR58 96 nt-4□□□□□ -3.05
TY1B-NL2Q99337 YDR157WYDR157W 402 nt-4.03□□□□□ -3.05
TY1B-NL2Q99337 YKL225WYKL225W 348 nt-4.08□□□□□ -3.06
TY1B-NL2Q99337 YBL053WYBL053W 375 nt-4.11□□□□□ -3.07
TY1B-NL2Q99337 YDL240C-AYDL240C-A 138 nt-4.12□□□□□ -3.07
TY1B-NL2Q99337 YJL136W-AYJL136W-A 84 nt-4.12□□□□□ -3.07
TY1B-NL2Q99337 YKL096C-BYKL096C-B 150 nt-4.12□□□□□ -3.07
TY1B-NL2Q99337 SPG3YDR504C 384 nt-4.14□□□□□ -3.07
TY1B-NL2Q99337 YHR175W-AYHR175W-A 150 nt-4.14□□□□□ -3.07
TY1B-NL2Q99337 YDR118W-AYDR118W-A 117 nt-4.15□□□□□ -3.07
TY1B-NL2Q99337 tS(GCU)Q1tS(GCU)Q1 86 nt-4.18□□□□□ -3.08
TY1B-NL2Q99337 tR(UCU)Q1tR(UCU)Q1 73 nt-4.19□□□□□ -3.08
TY1B-NL2Q99337 YAL037C-AYAL037C-A 93 nt-4.19□□□□□ -3.08
TY1B-NL2Q99337 YBL100W-CYBL100W-C 120 nt-4.25□□□□□ -3.09
TY1B-NL2Q99337 YDL159W-AYDL159W-A 132 nt-4.32□□□□□ -3.1
TY1B-NL2Q99337 YPL152W-AYPL152W-A 99 nt-4.32□□□□□ -3.1
TY1B-NL2Q99337 YGR122C-AYGR122C-A 129 nt-4.36□□□□□ -3.11
TY1B-NL2Q99337 YEL050W-AYEL050W-A 192 nt-4.41□□□□□ -3.11
TY1B-NL2Q99337 YDR034C-AYDR034C-A 177 nt-4.47□□□□□ -3.13
TY1B-NL2Q99337 snR65snR65 100 nt-4.52□□□□□ -3.13
TY1B-NL2Q99337 YNL170WYNL170W 396 nt-4.62□□□□□ -3.15
TY1B-NL2Q99337 tC(GCA)QtC(GCA)Q 76 nt-4.75□□□□□ -3.17
TY1B-NL2Q99337 YGL007C-AYGL007C-A 87 nt-4.76□□□□□ -3.17
TY1B-NL2Q99337 Q0017Q0017 162 nt-4.77□□□□□ -3.17
Retrieved 100 of 7,029 protein–RNA pairs in 65.1 ms