Protein–RNA interactions for Protein: Q6B2U8

TDA8, Topoisomerase I damage affected protein 8, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA8Q6B2U8 YOR170WYOR170W 306 nt-0.88□□□□□ -2.55
TDA8Q6B2U8 tM(CAU)Q2tM(CAU)Q2 78 nt-0.89□□□□□ -2.55
TDA8Q6B2U8 YOR381W-AYOR381W-A 168 nt-0.89□□□□□ -2.55
TDA8Q6B2U8 YJL182CYJL182C 318 nt-0.9□□□□□ -2.55
TDA8Q6B2U8 YEL014CYEL014C 306 nt-0.91□□□□□ -2.56
TDA8Q6B2U8 snR49snR49 165 nt-0.93□□□□□ -2.56
TDA8Q6B2U8 YER090C-AYER090C-A 90 nt-0.95□□□□□ -2.56
TDA8Q6B2U8 YGR146C-AYGR146C-A 162 nt-0.95□□□□□ -2.56
TDA8Q6B2U8 YBR131C-AYBR131C-A 90 nt-0.95□□□□□ -2.56
TDA8Q6B2U8 snR55snR55 98 nt-0.96□□□□□ -2.56
TDA8Q6B2U8 RDS3YPR094W 324 nt-0.96□□□□□ -2.56
TDA8Q6B2U8 PMP2YEL017C-A 132 nt-0.98□□□□□ -2.57
TDA8Q6B2U8 snR39BsnR39B 96 nt-0.98□□□□□ -2.57
TDA8Q6B2U8 YNL266WYNL266W 420 nt-1□□□□□ -2.57
TDA8Q6B2U8 snR50snR50 90 nt-1.02□□□□□ -2.57
TDA8Q6B2U8 YNL097C-BYNL097C-B 123 nt-1.03□□□□□ -2.57
TDA8Q6B2U8 YOR329W-AYOR329W-A 210 nt-1.07□□□□□ -2.58
TDA8Q6B2U8 YOL155W-AYOL155W-A 135 nt-1.09□□□□□ -2.58
TDA8Q6B2U8 snR161snR161 161 nt-1.1□□□□□ -2.59
TDA8Q6B2U8 snR65snR65 100 nt-1.12□□□□□ -2.59
TDA8Q6B2U8 YPL152W-AYPL152W-A 99 nt-1.14□□□□□ -2.59
TDA8Q6B2U8 snR67snR67 82 nt-1.15□□□□□ -2.59
TDA8Q6B2U8 tD(GUC)QtD(GUC)Q 75 nt-1.15□□□□□ -2.59
TDA8Q6B2U8 JLP2YMR132C 627 nt-1.15□□□□□ -2.59
TDA8Q6B2U8 YBR223W-AYBR223W-A 120 nt-1.15□□□□□ -2.59
TDA8Q6B2U8 YOR302WYOR302W 78 nt-1.18□□□□□ -2.6
TDA8Q6B2U8 YLR286W-AYLR286W-A 135 nt-1.19□□□□□ -2.6
TDA8Q6B2U8 YNL205CYNL205C 423 nt-1.19□□□□□ -2.6
TDA8Q6B2U8 snR48snR48 113 nt-1.2□□□□□ -2.6
TDA8Q6B2U8 YHR175W-AYHR175W-A 150 nt-1.21□□□□□ -2.6
TDA8Q6B2U8 YBR178WYBR178W 375 nt-1.23□□□□□ -2.61
TDA8Q6B2U8 YDL159C-BYDL159C-B 177 nt-1.26□□□□□ -2.61
TDA8Q6B2U8 SKI7YOR076C 2244 nt-1.27□□□□□ -2.61
TDA8Q6B2U8 YGL188C-AYGL188C-A 141 nt-1.28□□□□□ -2.61
TDA8Q6B2U8 tP(UGG)QtP(UGG)Q 72 nt-1.28□□□□□ -2.61
TDA8Q6B2U8 YOR102WYOR102W 351 nt-1.3□□□□□ -2.62
TDA8Q6B2U8 tL(UAA)QtL(UAA)Q 85 nt-1.31□□□□□ -2.62
TDA8Q6B2U8 tR(ACG)Q2tR(ACG)Q2 74 nt-1.31□□□□□ -2.62
TDA8Q6B2U8 YLR342W-AYLR342W-A 174 nt-1.31□□□□□ -2.62
TDA8Q6B2U8 snR56snR56 88 nt-1.32□□□□□ -2.62
TDA8Q6B2U8 snR52snR52 92 nt-1.33□□□□□ -2.62
TDA8Q6B2U8 YHL015W-AYHL015W-A 84 nt-1.39□□□□□ -2.63
TDA8Q6B2U8 YOR231C-AYOR231C-A 201 nt-1.41□□□□□ -2.64
TDA8Q6B2U8 YLR299C-AYLR299C-A 93 nt-1.43□□□□□ -2.64
TDA8Q6B2U8 YML054C-AYML054C-A 159 nt-1.43□□□□□ -2.64
TDA8Q6B2U8 YBR196C-AYBR196C-A 150 nt-1.45□□□□□ -2.64
TDA8Q6B2U8 snR80snR80 171 nt-1.47□□□□□ -2.64
TDA8Q6B2U8 YDR524W-CYDR524W-C 90 nt-1.52□□□□□ -2.65
TDA8Q6B2U8 tY(GUA)QtY(GUA)Q 84 nt-1.52□□□□□ -2.65
TDA8Q6B2U8 YGR240C-AYGR240C-A 201 nt-1.58□□□□□ -2.66
TDA8Q6B2U8 YNL198CYNL198C 303 nt-1.6□□□□□ -2.67
TDA8Q6B2U8 YDR406W-AYDR406W-A 246 nt-1.61□□□□□ -2.67
TDA8Q6B2U8 CDC65tQ(CUG)M 72 nt-1.61□□□□□ -2.67
TDA8Q6B2U8 YNR077CYNR077C 255 nt-1.62□□□□□ -2.67
TDA8Q6B2U8 snR77snR77 88 nt-1.68□□□□□ -2.68
TDA8Q6B2U8 YHR180C-BYHR180C-B 105 nt-1.7□□□□□ -2.68
TDA8Q6B2U8 SOM1YEL059C-A 225 nt-1.73□□□□□ -2.69
TDA8Q6B2U8 YOR376W-AYOR376W-A 156 nt-1.74□□□□□ -2.69
TDA8Q6B2U8 YJL150WYJL150W 303 nt-1.76□□□□□ -2.69
TDA8Q6B2U8 YCR095W-AYCR095W-A 159 nt-1.81□□□□□ -2.7
TDA8Q6B2U8 YBL053WYBL053W 375 nt-1.82□□□□□ -2.7
TDA8Q6B2U8 YMR315W-AYMR315W-A 108 nt-1.82□□□□□ -2.7
TDA8Q6B2U8 snR81snR81 201 nt-1.84□□□□□ -2.7
TDA8Q6B2U8 YOR316C-AYOR316C-A 210 nt-1.88□□□□□ -2.71
TDA8Q6B2U8 YKL106C-AYKL106C-A 120 nt-1.89□□□□□ -2.71
TDA8Q6B2U8 YMR046W-AYMR046W-A 129 nt-1.92□□□□□ -2.72
TDA8Q6B2U8 YBR126W-BYBR126W-B 144 nt-1.98□□□□□ -2.73
TDA8Q6B2U8 YBR296C-AYBR296C-A 120 nt-1.98□□□□□ -2.73
TDA8Q6B2U8 YBR109W-AYBR109W-A 225 nt-2□□□□□ -2.73
TDA8Q6B2U8 RPL41AYDL184C 78 nt-2.01□□□□□ -2.73
TDA8Q6B2U8 YGR151CYGR151C 336 nt-2.06□□□□□ -2.74
TDA8Q6B2U8 YOL083C-AYOL083C-A 141 nt-2.09□□□□□ -2.74
TDA8Q6B2U8 SPG3YDR504C 384 nt-2.1□□□□□ -2.75
TDA8Q6B2U8 YBL071C-BYBL071C-B 99 nt-2.13□□□□□ -2.75
TDA8Q6B2U8 snR38snR38 95 nt-2.16□□□□□ -2.76
TDA8Q6B2U8 tM(CAU)Q1tM(CAU)Q1 76 nt-2.18□□□□□ -2.76
TDA8Q6B2U8 YOL164W-AYOL164W-A 183 nt-2.19□□□□□ -2.76
TDA8Q6B2U8 Q0142Q0142 177 nt-2.2□□□□□ -2.76
TDA8Q6B2U8 YOR309CYOR309C 381 nt-2.21□□□□□ -2.76
TDA8Q6B2U8 YAL037C-AYAL037C-A 93 nt-2.22□□□□□ -2.76
TDA8Q6B2U8 YCL001W-BYCL001W-B 255 nt-2.23□□□□□ -2.77
TDA8Q6B2U8 YBL100W-CYBL100W-C 120 nt-2.3□□□□□ -2.78
TDA8Q6B2U8 snR47snR47 99 nt-2.3□□□□□ -2.78
TDA8Q6B2U8 YLR466C-BYLR466C-B 117 nt-2.31□□□□□ -2.78
TDA8Q6B2U8 snR6snR6 112 nt-2.45□□□□□ -2.8
TDA8Q6B2U8 YNL338WYNL338W 159 nt-2.45□□□□□ -2.8
TDA8Q6B2U8 YNL337WYNL337W 255 nt-2.47□□□□□ -2.8
TDA8Q6B2U8 YKL225WYKL225W 348 nt-2.56□□□□□ -2.82
TDA8Q6B2U8 YOR335W-AYOR335W-A 81 nt-2.57□□□□□ -2.82
TDA8Q6B2U8 RPL41BYDL133C-A 78 nt-2.58□□□□□ -2.82
TDA8Q6B2U8 tS(GCU)Q1tS(GCU)Q1 86 nt-2.6□□□□□ -2.83
TDA8Q6B2U8 snR73snR73 106 nt-2.64□□□□□ -2.83
TDA8Q6B2U8 YDL114W-AYDL114W-A 114 nt-2.64□□□□□ -2.83
TDA8Q6B2U8 tV(UAC)QtV(UAC)Q 76 nt-2.68□□□□□ -2.84
TDA8Q6B2U8 YDR543CYDR543C 300 nt-2.69□□□□□ -2.84
TDA8Q6B2U8 YGL041C-BYGL041C-B 183 nt-2.77□□□□□ -2.85
TDA8Q6B2U8 Q0032Q0032 291 nt-2.78□□□□□ -2.85
TDA8Q6B2U8 snR85snR85 171 nt-2.78□□□□□ -2.85
TDA8Q6B2U8 snR61snR61 90 nt-2.84□□□□□ -2.86
TDA8Q6B2U8 YDR034C-AYDR034C-A 177 nt-2.84□□□□□ -2.86
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms