Protein–RNA interactions for Protein: Q08971

YPL225W, Protein PBDC1 homolog, yeastyeast

Known RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL225WQ08971 YGL041CYGL041C 204 nt-3.32□□□□□ -2.94
YPL225WQ08971 tW(UCA)QtW(UCA)Q 74 nt-3.32□□□□□ -2.94
YPL225WQ08971 YNL028WYNL028W 318 nt-3.35□□□□□ -2.95
YPL225WQ08971 YPR197CYPR197C 564 nt-3.37□□□□□ -2.95
YPL225WQ08971 YEL014CYEL014C 306 nt-3.38□□□□□ -2.95
YPL225WQ08971 YLR120W-AYLR120W-A 102 nt-3.39□□□□□ -2.95
YPL225WQ08971 YOL038C-AYOL038C-A 96 nt-3.41□□□□□ -2.96
YPL225WQ08971 YOR329W-AYOR329W-A 210 nt-3.41□□□□□ -2.96
YPL225WQ08971 YLR299C-AYLR299C-A 93 nt-3.42□□□□□ -2.96
YPL225WQ08971 YPR012WYPR012W 255 nt-3.43□□□□□ -2.96
YPL225WQ08971 snR41snR41 95 nt-3.43□□□□□ -2.96
YPL225WQ08971 YHR180C-BYHR180C-B 105 nt-3.47□□□□□ -2.96
YPL225WQ08971 YAL016C-BYAL016C-B 186 nt-3.47□□□□□ -2.96
YPL225WQ08971 snR55snR55 98 nt-3.48□□□□□ -2.97
YPL225WQ08971 snR78snR78 87 nt-3.48□□□□□ -2.97
YPL225WQ08971 YOL013W-BYOL013W-B 291 nt-3.48□□□□□ -2.97
YPL225WQ08971 snR6snR6 112 nt-3.5□□□□□ -2.97
YPL225WQ08971 YER181CYER181C 324 nt-3.5□□□□□ -2.97
YPL225WQ08971 YKL106C-AYKL106C-A 120 nt-3.52□□□□□ -2.97
YPL225WQ08971 YLR222C-AYLR222C-A 231 nt-3.56□□□□□ -2.98
YPL225WQ08971 Q0142Q0142 177 nt-3.57□□□□□ -2.98
YPL225WQ08971 YOL155W-AYOL155W-A 135 nt-3.57□□□□□ -2.98
YPL225WQ08971 HTL1YCR020W-B 237 nt-3.6□□□□□ -2.99
YPL225WQ08971 YOL166W-AYOL166W-A 156 nt-3.6□□□□□ -2.99
YPL225WQ08971 YJL047C-AYJL047C-A 135 nt-3.63□□□□□ -2.99
YPL225WQ08971 STE18YJR086W 333 nt-3.64□□□□□ -2.99
YPL225WQ08971 snR73snR73 106 nt-3.65□□□□□ -2.99
YPL225WQ08971 YNL122CYNL122C 348 nt-3.68□□□□□ -3
YPL225WQ08971 YOR335W-AYOR335W-A 81 nt-3.69□□□□□ -3
YPL225WQ08971 YDR413CYDR413C 576 nt-3.71□□□□□ -3
YPL225WQ08971 BIL1YOR304C-A 231 nt-3.72□□□□□ -3
YPL225WQ08971 snR80snR80 171 nt-3.73□□□□□ -3.01
YPL225WQ08971 YDR524C-AYDR524C-A 120 nt-3.73□□□□□ -3.01
YPL225WQ08971 YJL150WYJL150W 303 nt-3.75□□□□□ -3.01
YPL225WQ08971 YKL123WYKL123W 381 nt-3.76□□□□□ -3.01
YPL225WQ08971 YBR131C-AYBR131C-A 90 nt-3.76□□□□□ -3.01
YPL225WQ08971 Q0255Q0255 1419 nt-3.79□□□□□ -3.02
YPL225WQ08971 RPL41BYDL133C-A 78 nt-3.83□□□□□ -3.02
YPL225WQ08971 YOR102WYOR102W 351 nt-3.83□□□□□ -3.02
YPL225WQ08971 YBR109W-AYBR109W-A 225 nt-3.88□□□□□ -3.03
YPL225WQ08971 YLR285C-AYLR285C-A 171 nt-3.89□□□□□ -3.03
YPL225WQ08971 YGL188C-AYGL188C-A 141 nt-3.93□□□□□ -3.04
YPL225WQ08971 tL(UAA)QtL(UAA)Q 85 nt-3.98□□□□□ -3.05
YPL225WQ08971 tF(GAA)QtF(GAA)Q 75 nt-3.99□□□□□ -3.05
YPL225WQ08971 snR48snR48 113 nt-4□□□□□ -3.05
YPL225WQ08971 YKL118WYKL118W 312 nt-4.03□□□□□ -3.05
YPL225WQ08971 YJR162CYJR162C 351 nt-4.06□□□□□ -3.06
YPL225WQ08971 YNL337WYNL337W 255 nt-4.06□□□□□ -3.06
YPL225WQ08971 YPL038W-AYPL038W-A 192 nt-4.06□□□□□ -3.06
YPL225WQ08971 YGR035CYGR035C 351 nt-4.09□□□□□ -3.06
YPL225WQ08971 YNL097C-BYNL097C-B 123 nt-4.11□□□□□ -3.07
YPL225WQ08971 YDR183C-AYDR183C-A 258 nt-4.12□□□□□ -3.07
YPL225WQ08971 YBR296C-AYBR296C-A 120 nt-4.12□□□□□ -3.07
YPL225WQ08971 GIM4YEL003W 336 nt-4.14□□□□□ -3.07
YPL225WQ08971 RPL41AYDL184C 78 nt-4.16□□□□□ -3.08
YPL225WQ08971 YAL063C-AYAL063C-A 291 nt-4.2□□□□□ -3.08
YPL225WQ08971 YNL198CYNL198C 303 nt-4.22□□□□□ -3.08
YPL225WQ08971 snR38snR38 95 nt-4.22□□□□□ -3.08
YPL225WQ08971 snR87snR87 109 nt-4.33□□□□□ -3.1
YPL225WQ08971 snR56snR56 88 nt-4.34□□□□□ -3.1
YPL225WQ08971 YNR025CYNR025C 360 nt-4.35□□□□□ -3.11
YPL225WQ08971 YDR406W-AYDR406W-A 246 nt-4.37□□□□□ -3.11
YPL225WQ08971 YHL015W-AYHL015W-A 84 nt-4.42□□□□□ -3.12
YPL225WQ08971 snR85snR85 171 nt-4.5□□□□□ -3.13
YPL225WQ08971 snR52snR52 92 nt-4.5□□□□□ -3.13
YPL225WQ08971 YNL277W-AYNL277W-A 189 nt-4.51□□□□□ -3.13
YPL225WQ08971 YOR302WYOR302W 78 nt-4.52□□□□□ -3.13
YPL225WQ08971 tV(UAC)QtV(UAC)Q 76 nt-4.56□□□□□ -3.14
YPL225WQ08971 RPL39YJL189W 156 nt-4.6□□□□□ -3.15
YPL225WQ08971 YDL114W-AYDL114W-A 114 nt-4.61□□□□□ -3.15
YPL225WQ08971 SOM1YEL059C-A 225 nt-4.65□□□□□ -3.15
YPL225WQ08971 YBL071C-BYBL071C-B 99 nt-4.72□□□□□ -3.17
YPL225WQ08971 YOL164W-AYOL164W-A 183 nt-4.75□□□□□ -3.17
YPL225WQ08971 YCR095W-AYCR095W-A 159 nt-4.76□□□□□ -3.17
YPL225WQ08971 snR47snR47 99 nt-4.78□□□□□ -3.17
YPL225WQ08971 YGR151CYGR151C 336 nt-4.88□□□□□ -3.19
YPL225WQ08971 tR(UCU)Q1tR(UCU)Q1 73 nt-4.91□□□□□ -3.2
YPL225WQ08971 YDR118W-AYDR118W-A 117 nt-4.94□□□□□ -3.2
YPL225WQ08971 YBL053WYBL053W 375 nt-4.94□□□□□ -3.2
YPL225WQ08971 SPG3YDR504C 384 nt-4.95□□□□□ -3.2
YPL225WQ08971 YDR157WYDR157W 402 nt-4.98□□□□□ -3.21
YPL225WQ08971 YKL096C-BYKL096C-B 150 nt-4.98□□□□□ -3.21
YPL225WQ08971 YKL225WYKL225W 348 nt-5.02□□□□□ -3.21
YPL225WQ08971 snR58snR58 96 nt-5.04□□□□□ -3.22
YPL225WQ08971 YDL240C-AYDL240C-A 138 nt-5.05□□□□□ -3.22
YPL225WQ08971 YBL100W-CYBL100W-C 120 nt-5.08□□□□□ -3.22
YPL225WQ08971 YPL152W-AYPL152W-A 99 nt-5.11□□□□□ -3.23
YPL225WQ08971 YJL136W-AYJL136W-A 84 nt-5.15□□□□□ -3.23
YPL225WQ08971 YAL037C-AYAL037C-A 93 nt-5.15□□□□□ -3.23
YPL225WQ08971 YHR175W-AYHR175W-A 150 nt-5.16□□□□□ -3.24
YPL225WQ08971 tS(GCU)Q1tS(GCU)Q1 86 nt-5.17□□□□□ -3.24
YPL225WQ08971 YEL050W-AYEL050W-A 192 nt-5.34□□□□□ -3.26
YPL225WQ08971 YGR122C-AYGR122C-A 129 nt-5.36□□□□□ -3.27
YPL225WQ08971 YDR034C-AYDR034C-A 177 nt-5.39□□□□□ -3.27
YPL225WQ08971 YDL159W-AYDL159W-A 132 nt-5.4□□□□□ -3.27
YPL225WQ08971 snR65snR65 100 nt-5.47□□□□□ -3.29
YPL225WQ08971 YNL170WYNL170W 396 nt-5.58□□□□□ -3.3
YPL225WQ08971 YCL001W-BYCL001W-B 255 nt-5.69□□□□□ -3.32
YPL225WQ08971 tC(GCA)QtC(GCA)Q 76 nt-5.8□□□□□ -3.34
YPL225WQ08971 YGL007C-AYGL007C-A 87 nt-5.84□□□□□ -3.34
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms