Protein–RNA interactions for Protein: Q08873

SCP1, Transgelin, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCP1Q08873 ATP6Q0085 780 nt-3.05□□□□□ -2.9
SCP1Q08873 YMR001C-AYMR001C-A 231 nt-3.07□□□□□ -2.9
SCP1Q08873 tW(UCA)QtW(UCA)Q 74 nt-3.09□□□□□ -2.9
SCP1Q08873 YBR196C-AYBR196C-A 150 nt-3.09□□□□□ -2.9
SCP1Q08873 YJR157WYJR157W 363 nt-3.1□□□□□ -2.91
SCP1Q08873 YOR381W-AYOR381W-A 168 nt-3.1□□□□□ -2.91
SCP1Q08873 Q0255Q0255 1419 nt-3.11□□□□□ -2.91
SCP1Q08873 YOR316C-AYOR316C-A 210 nt-3.12□□□□□ -2.91
SCP1Q08873 STE18YJR086W 333 nt-3.14□□□□□ -2.91
SCP1Q08873 YLR120W-AYLR120W-A 102 nt-3.15□□□□□ -2.91
SCP1Q08873 YNL122CYNL122C 348 nt-3.16□□□□□ -2.92
SCP1Q08873 YGL041CYGL041C 204 nt-3.17□□□□□ -2.92
SCP1Q08873 YKL123WYKL123W 381 nt-3.21□□□□□ -2.92
SCP1Q08873 YPR197CYPR197C 564 nt-3.21□□□□□ -2.92
SCP1Q08873 HTL1YCR020W-B 237 nt-3.23□□□□□ -2.93
SCP1Q08873 YLR299C-AYLR299C-A 93 nt-3.23□□□□□ -2.93
SCP1Q08873 YAL016C-BYAL016C-B 186 nt-3.26□□□□□ -2.93
SCP1Q08873 YLR285C-AYLR285C-A 171 nt-3.26□□□□□ -2.93
SCP1Q08873 YOR329W-AYOR329W-A 210 nt-3.26□□□□□ -2.93
SCP1Q08873 YPR012WYPR012W 255 nt-3.26□□□□□ -2.93
SCP1Q08873 BIL1YOR304C-A 231 nt-3.27□□□□□ -2.93
SCP1Q08873 YHR180C-BYHR180C-B 105 nt-3.28□□□□□ -2.93
SCP1Q08873 snR78snR78 87 nt-3.29□□□□□ -2.94
SCP1Q08873 YEL014CYEL014C 306 nt-3.29□□□□□ -2.94
SCP1Q08873 YOL013W-BYOL013W-B 291 nt-3.29□□□□□ -2.94
SCP1Q08873 snR55snR55 98 nt-3.3□□□□□ -2.94
SCP1Q08873 snR6snR6 112 nt-3.34□□□□□ -2.94
SCP1Q08873 YKL106C-AYKL106C-A 120 nt-3.35□□□□□ -2.95
SCP1Q08873 YER181CYER181C 324 nt-3.37□□□□□ -2.95
SCP1Q08873 YLR222C-AYLR222C-A 231 nt-3.42□□□□□ -2.96
SCP1Q08873 YOL155W-AYOL155W-A 135 nt-3.42□□□□□ -2.96
SCP1Q08873 snR73snR73 106 nt-3.48□□□□□ -2.97
SCP1Q08873 YJR162CYJR162C 351 nt-3.49□□□□□ -2.97
SCP1Q08873 YNL337WYNL337W 255 nt-3.49□□□□□ -2.97
SCP1Q08873 YOR335W-AYOR335W-A 81 nt-3.52□□□□□ -2.97
SCP1Q08873 snR80snR80 171 nt-3.57□□□□□ -2.98
SCP1Q08873 YDR413CYDR413C 576 nt-3.57□□□□□ -2.98
SCP1Q08873 YDR524C-AYDR524C-A 120 nt-3.59□□□□□ -2.98
SCP1Q08873 YJL150WYJL150W 303 nt-3.6□□□□□ -2.99
SCP1Q08873 YOR102WYOR102W 351 nt-3.61□□□□□ -2.99
SCP1Q08873 YGR035CYGR035C 351 nt-3.64□□□□□ -2.99
SCP1Q08873 YAL063C-AYAL063C-A 291 nt-3.65□□□□□ -2.99
SCP1Q08873 YBR109W-AYBR109W-A 225 nt-3.66□□□□□ -3
SCP1Q08873 YBR131C-AYBR131C-A 90 nt-3.66□□□□□ -3
SCP1Q08873 RPL41BYDL133C-A 78 nt-3.68□□□□□ -3
SCP1Q08873 YGL188C-AYGL188C-A 141 nt-3.72□□□□□ -3
SCP1Q08873 snR48snR48 113 nt-3.72□□□□□ -3
SCP1Q08873 YNR025CYNR025C 360 nt-3.74□□□□□ -3.01
SCP1Q08873 YDR183C-AYDR183C-A 258 nt-3.75□□□□□ -3.01
SCP1Q08873 tL(UAA)QtL(UAA)Q 85 nt-3.79□□□□□ -3.02
SCP1Q08873 YKL118WYKL118W 312 nt-3.79□□□□□ -3.02
SCP1Q08873 tF(GAA)QtF(GAA)Q 75 nt-3.8□□□□□ -3.02
SCP1Q08873 YPL038W-AYPL038W-A 192 nt-3.85□□□□□ -3.03
SCP1Q08873 YBR296C-AYBR296C-A 120 nt-3.89□□□□□ -3.03
SCP1Q08873 YNL097C-BYNL097C-B 123 nt-3.91□□□□□ -3.04
SCP1Q08873 RPL41AYDL184C 78 nt-3.94□□□□□ -3.04
SCP1Q08873 GIM4YEL003W 336 nt-3.94□□□□□ -3.04
SCP1Q08873 snR38snR38 95 nt-3.99□□□□□ -3.05
SCP1Q08873 YNL198CYNL198C 303 nt-4.03□□□□□ -3.05
SCP1Q08873 snR56snR56 88 nt-4.05□□□□□ -3.06
SCP1Q08873 YDR406W-AYDR406W-A 246 nt-4.13□□□□□ -3.07
SCP1Q08873 snR87snR87 109 nt-4.14□□□□□ -3.07
SCP1Q08873 YHL015W-AYHL015W-A 84 nt-4.17□□□□□ -3.08
SCP1Q08873 RPL39YJL189W 156 nt-4.22□□□□□ -3.08
SCP1Q08873 YNL277W-AYNL277W-A 189 nt-4.23□□□□□ -3.09
SCP1Q08873 snR85snR85 171 nt-4.29□□□□□ -3.1
SCP1Q08873 tR(UCU)Q1tR(UCU)Q1 73 nt-4.3□□□□□ -3.1
SCP1Q08873 tV(UAC)QtV(UAC)Q 76 nt-4.31□□□□□ -3.1
SCP1Q08873 snR52snR52 92 nt-4.33□□□□□ -3.1
SCP1Q08873 YOR302WYOR302W 78 nt-4.36□□□□□ -3.11
SCP1Q08873 YDL114W-AYDL114W-A 114 nt-4.38□□□□□ -3.11
SCP1Q08873 SOM1YEL059C-A 225 nt-4.38□□□□□ -3.11
SCP1Q08873 YBL071C-BYBL071C-B 99 nt-4.46□□□□□ -3.12
SCP1Q08873 YOL164W-AYOL164W-A 183 nt-4.49□□□□□ -3.13
SCP1Q08873 YEL050W-AYEL050W-A 192 nt-4.52□□□□□ -3.13
SCP1Q08873 YCR095W-AYCR095W-A 159 nt-4.54□□□□□ -3.14
SCP1Q08873 snR47snR47 99 nt-4.55□□□□□ -3.14
SCP1Q08873 YDL240C-AYDL240C-A 138 nt-4.61□□□□□ -3.15
SCP1Q08873 YGR151CYGR151C 336 nt-4.62□□□□□ -3.15
SCP1Q08873 YDR118W-AYDR118W-A 117 nt-4.73□□□□□ -3.17
SCP1Q08873 YDR157WYDR157W 402 nt-4.73□□□□□ -3.17
SCP1Q08873 SPG3YDR504C 384 nt-4.73□□□□□ -3.17
SCP1Q08873 YKL096C-BYKL096C-B 150 nt-4.76□□□□□ -3.17
SCP1Q08873 YKL225WYKL225W 348 nt-4.76□□□□□ -3.17
SCP1Q08873 snR58snR58 96 nt-4.79□□□□□ -3.18
SCP1Q08873 YBL053WYBL053W 375 nt-4.79□□□□□ -3.18
SCP1Q08873 YBL100W-CYBL100W-C 120 nt-4.8□□□□□ -3.18
SCP1Q08873 YAL037C-AYAL037C-A 93 nt-4.83□□□□□ -3.18
SCP1Q08873 YPL152W-AYPL152W-A 99 nt-4.84□□□□□ -3.18
SCP1Q08873 YHR175W-AYHR175W-A 150 nt-4.9□□□□□ -3.19
SCP1Q08873 tS(GCU)Q1tS(GCU)Q1 86 nt-4.94□□□□□ -3.2
SCP1Q08873 YJL136W-AYJL136W-A 84 nt-4.98□□□□□ -3.21
SCP1Q08873 snR65snR65 100 nt-5.07□□□□□ -3.22
SCP1Q08873 YGR122C-AYGR122C-A 129 nt-5.1□□□□□ -3.23
SCP1Q08873 YDR034C-AYDR034C-A 177 nt-5.12□□□□□ -3.23
SCP1Q08873 YDL159W-AYDL159W-A 132 nt-5.17□□□□□ -3.24
SCP1Q08873 YCL001W-BYCL001W-B 255 nt-5.39□□□□□ -3.27
SCP1Q08873 YNL170WYNL170W 396 nt-5.4□□□□□ -3.27
SCP1Q08873 YGL007C-AYGL007C-A 87 nt-5.5□□□□□ -3.29
SCP1Q08873 tC(GCA)QtC(GCA)Q 76 nt-5.51□□□□□ -3.29
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms