Protein–RNA interactions for Protein: Q08550

MPC54, Meiotic plaque component protein 54, yeastyeast

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MPC54Q08550 FIG2YCR089W 4830 nt1.94□□□□□ -2.1
MPC54Q08550 YDL114W-AYDL114W-A 114 nt1.91□□□□□ -2.1
MPC54Q08550 MON2YNL297C 4911 nt1.88□□□□□ -2.11
MPC54Q08550 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
MPC54Q08550 YMR272W-BYMR272W-B 108 nt1.87□□□□□ -2.11
MPC54Q08550 TRM732YMR259C 4263 nt1.87□□□□□ -2.11
MPC54Q08550 NUP188YML103C 4968 nt1.86□□□□□ -2.11
MPC54Q08550 PEP1YBL017C 4740 nt1.85□□□□□ -2.11
MPC54Q08550 PMD1YER132C 5262 nt1.85□□□□□ -2.11
MPC54Q08550 MEC1YBR136W 7107 nt1.84□□□□□ -2.11
MPC54Q08550 CLU1YMR012W 3834 nt1.83□□□□□ -2.12
MPC54Q08550 MLP2YIL149C 5040 nt1.83□□□□□ -2.12
MPC54Q08550 BST1YFL025C 3090 nt1.81□□□□□ -2.12
MPC54Q08550 NUP192YJL039C 5052 nt1.8□□□□□ -2.12
MPC54Q08550 snR67snR67 82 nt1.8□□□□□ -2.12
MPC54Q08550 tV(UAC)QtV(UAC)Q 76 nt1.8□□□□□ -2.12
MPC54Q08550 LAA1YJL207C 6045 nt1.79□□□□□ -2.12
MPC54Q08550 snR40snR40 97 nt1.77□□□□□ -2.13
MPC54Q08550 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
MPC54Q08550 CDC39YCR093W 6327 nt1.75□□□□□ -2.13
MPC54Q08550 YKL106C-AYKL106C-A 120 nt1.75□□□□□ -2.13
MPC54Q08550 YNL284C-BYNL284C-B 5268 nt1.75□□□□□ -2.13
MPC54Q08550 SPC110YDR356W 2835 nt1.74□□□□□ -2.13
MPC54Q08550 YGR130CYGR130C 2451 nt1.73□□□□□ -2.13
MPC54Q08550 IRA1YBR140C 9279 nt1.71□□□□□ -2.14
MPC54Q08550 BRR2YER172C 6492 nt1.7□□□□□ -2.14
MPC54Q08550 YNL054W-BYNL054W-B 5250 nt1.7□□□□□ -2.14
MPC54Q08550 SSK2YNR031C 4740 nt1.68□□□□□ -2.14
MPC54Q08550 YMR160WYMR160W 2451 nt1.66□□□□□ -2.14
MPC54Q08550 SPT7YBR081C 3999 nt1.64□□□□□ -2.15
MPC54Q08550 tQ(UUG)E2tQ(UUG)E2 72 nt1.6□□□□□ -2.15
MPC54Q08550 CCH1YGR217W 6120 nt1.59□□□□□ -2.15
MPC54Q08550 VAM6YDL077C 3150 nt1.59□□□□□ -2.15
MPC54Q08550 YPR117WYPR117W 7470 nt1.52□□□□□ -2.17
MPC54Q08550 YOR192C-BYOR192C-B 5313 nt1.49□□□□□ -2.17
MPC54Q08550 HKR1YDR420W 5409 nt1.43□□□□□ -2.18
MPC54Q08550 snR77snR77 88 nt1.36□□□□□ -2.19
MPC54Q08550 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
MPC54Q08550 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
MPC54Q08550 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
MPC54Q08550 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
MPC54Q08550 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
MPC54Q08550 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
MPC54Q08550 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
MPC54Q08550 RKR1YMR247C 4689 nt1.35□□□□□ -2.19
MPC54Q08550 YOR316C-AYOR316C-A 210 nt1.33□□□□□ -2.2
MPC54Q08550 LTE1YAL024C 4308 nt1.33□□□□□ -2.2
MPC54Q08550 BUD3YCL014W 4911 nt1.33□□□□□ -2.2
MPC54Q08550 MYO1YHR023W 5787 nt1.3□□□□□ -2.2
MPC54Q08550 tV(UAC)BtV(UAC)B 74 nt1.29□□□□□ -2.2
MPC54Q08550 tV(UAC)DtV(UAC)D 74 nt1.29□□□□□ -2.2
MPC54Q08550 SCC2YDR180W 4482 nt1.28□□□□□ -2.21
MPC54Q08550 IML1YJR138W 4755 nt1.27□□□□□ -2.21
MPC54Q08550 YBL100W-BYBL100W-B 5313 nt1.26□□□□□ -2.21
MPC54Q08550 BEM2YER155C 6504 nt1.26□□□□□ -2.21
MPC54Q08550 SBH2YER019C-A 267 nt1.24□□□□□ -2.21
MPC54Q08550 PAU24YBR301W 363 nt1.24□□□□□ -2.21
MPC54Q08550 MLP1YKR095W 5628 nt1.15□□□□□ -2.22
MPC54Q08550 YML100W-AYML100W-A 174 nt1.15□□□□□ -2.23
MPC54Q08550 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
MPC54Q08550 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
MPC54Q08550 SOV1YMR066W 2697 nt1.09□□□□□ -2.23
MPC54Q08550 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
MPC54Q08550 YOR186C-AYOR186C-A 210 nt1.04□□□□□ -2.24
MPC54Q08550 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
MPC54Q08550 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
MPC54Q08550 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
MPC54Q08550 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
MPC54Q08550 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
MPC54Q08550 IQG1YPL242C 4488 nt0.95□□□□□ -2.26
MPC54Q08550 ESP1YGR098C 4893 nt0.92□□□□□ -2.26
MPC54Q08550 tF(GAA)BtF(GAA)B 73 nt0.84□□□□□ -2.27
MPC54Q08550 tF(GAA)FtF(GAA)F 73 nt0.84□□□□□ -2.27
MPC54Q08550 tF(GAA)GtF(GAA)G 73 nt0.84□□□□□ -2.27
MPC54Q08550 tF(GAA)H1tF(GAA)H1 73 nt0.84□□□□□ -2.27
MPC54Q08550 tF(GAA)H2tF(GAA)H2 73 nt0.84□□□□□ -2.27
MPC54Q08550 tF(GAA)MtF(GAA)M 73 nt0.84□□□□□ -2.27
MPC54Q08550 tF(GAA)P1tF(GAA)P1 73 nt0.84□□□□□ -2.27
MPC54Q08550 tF(GAA)P2tF(GAA)P2 73 nt0.84□□□□□ -2.27
MPC54Q08550 THO2YNL139C 4794 nt0.83□□□□□ -2.28
MPC54Q08550 PAU9YBL108C-A 129 nt0.83□□□□□ -2.28
MPC54Q08550 YJL113WYJL113W 4647 nt0.83□□□□□ -2.28
MPC54Q08550 UTP20YBL004W 7482 nt0.79□□□□□ -2.28
MPC54Q08550 FMP27YLR454W 7887 nt0.78□□□□□ -2.28
MPC54Q08550 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
MPC54Q08550 tC(GCA)QtC(GCA)Q 76 nt0.7□□□□□ -2.3
MPC54Q08550 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
MPC54Q08550 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
MPC54Q08550 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
MPC54Q08550 YOL014WYOL014W 375 nt0.69□□□□□ -2.3
MPC54Q08550 snR128snR128 126 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms