Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 YPR197CYPR197C 564 nt-1.47□□□□□ -2.64
SHH4Q06236 tY(GUA)QtY(GUA)Q 84 nt-1.49□□□□□ -2.65
SHH4Q06236 YDR157WYDR157W 402 nt-1.5□□□□□ -2.65
SHH4Q06236 YEL014CYEL014C 306 nt-1.52□□□□□ -2.65
SHH4Q06236 snR39BsnR39B 96 nt-1.53□□□□□ -2.65
SHH4Q06236 YFL019CYFL019C 354 nt-1.54□□□□□ -2.66
SHH4Q06236 tF(GAA)QtF(GAA)Q 75 nt-1.56□□□□□ -2.66
SHH4Q06236 RPL39YJL189W 156 nt-1.57□□□□□ -2.66
SHH4Q06236 snR67snR67 82 nt-1.58□□□□□ -2.66
SHH4Q06236 SKI7YOR076C 2244 nt-1.58□□□□□ -2.66
SHH4Q06236 YER181CYER181C 324 nt-1.59□□□□□ -2.66
SHH4Q06236 YLR222C-AYLR222C-A 231 nt-1.59□□□□□ -2.66
SHH4Q06236 YDR413CYDR413C 576 nt-1.61□□□□□ -2.67
SHH4Q06236 YBR131C-AYBR131C-A 90 nt-1.62□□□□□ -2.67
SHH4Q06236 tD(GUC)QtD(GUC)Q 75 nt-1.64□□□□□ -2.67
SHH4Q06236 YDL240C-AYDL240C-A 138 nt-1.67□□□□□ -2.68
SHH4Q06236 YLR286W-AYLR286W-A 135 nt-1.67□□□□□ -2.68
SHH4Q06236 YOR329W-AYOR329W-A 210 nt-1.67□□□□□ -2.68
SHH4Q06236 YNL277W-AYNL277W-A 189 nt-1.68□□□□□ -2.68
SHH4Q06236 YDR118W-AYDR118W-A 117 nt-1.7□□□□□ -2.68
SHH4Q06236 YKL118WYKL118W 312 nt-1.71□□□□□ -2.68
SHH4Q06236 snR55snR55 98 nt-1.76□□□□□ -2.69
SHH4Q06236 CDC65tQ(CUG)M 72 nt-1.76□□□□□ -2.69
SHH4Q06236 YBR178WYBR178W 375 nt-1.76□□□□□ -2.69
SHH4Q06236 YDL159C-BYDL159C-B 177 nt-1.77□□□□□ -2.69
SHH4Q06236 YNL097C-BYNL097C-B 123 nt-1.77□□□□□ -2.69
SHH4Q06236 YNL205CYNL205C 423 nt-1.79□□□□□ -2.7
SHH4Q06236 YGR240C-AYGR240C-A 201 nt-1.8□□□□□ -2.7
SHH4Q06236 snR81snR81 201 nt-1.81□□□□□ -2.7
SHH4Q06236 YML054C-AYML054C-A 159 nt-1.81□□□□□ -2.7
SHH4Q06236 GIM4YEL003W 336 nt-1.82□□□□□ -2.7
SHH4Q06236 VAR1Q0140 1197 nt-1.83□□□□□ -2.7
SHH4Q06236 YPR012WYPR012W 255 nt-1.86□□□□□ -2.71
SHH4Q06236 YMR315W-AYMR315W-A 108 nt-1.88□□□□□ -2.71
SHH4Q06236 snR48snR48 113 nt-1.88□□□□□ -2.71
SHH4Q06236 snR77snR77 88 nt-1.89□□□□□ -2.71
SHH4Q06236 YOL155W-AYOL155W-A 135 nt-1.94□□□□□ -2.72
SHH4Q06236 YOR102WYOR102W 351 nt-1.96□□□□□ -2.72
SHH4Q06236 YBR126W-BYBR126W-B 144 nt-1.96□□□□□ -2.72
SHH4Q06236 YOR302WYOR302W 78 nt-1.98□□□□□ -2.73
SHH4Q06236 YGL188C-AYGL188C-A 141 nt-1.99□□□□□ -2.73
SHH4Q06236 YLR299C-AYLR299C-A 93 nt-1.99□□□□□ -2.73
SHH4Q06236 tL(UAA)QtL(UAA)Q 85 nt-2.01□□□□□ -2.73
SHH4Q06236 YPL152W-AYPL152W-A 99 nt-2.07□□□□□ -2.74
SHH4Q06236 YBR196C-AYBR196C-A 150 nt-2.07□□□□□ -2.74
SHH4Q06236 snR65snR65 100 nt-2.11□□□□□ -2.75
SHH4Q06236 YLR342W-AYLR342W-A 174 nt-2.11□□□□□ -2.75
SHH4Q06236 snR52snR52 92 nt-2.12□□□□□ -2.75
SHH4Q06236 YHL015W-AYHL015W-A 84 nt-2.17□□□□□ -2.76
SHH4Q06236 YOR376W-AYOR376W-A 156 nt-2.19□□□□□ -2.76
SHH4Q06236 YOR309CYOR309C 381 nt-2.2□□□□□ -2.76
SHH4Q06236 YHR180C-BYHR180C-B 105 nt-2.3□□□□□ -2.78
SHH4Q06236 YNL198CYNL198C 303 nt-2.34□□□□□ -2.78
SHH4Q06236 Q0144Q0144 330 nt-2.37□□□□□ -2.79
SHH4Q06236 YOR316C-AYOR316C-A 210 nt-2.37□□□□□ -2.79
SHH4Q06236 YDR524W-CYDR524W-C 90 nt-2.39□□□□□ -2.79
SHH4Q06236 YDR543CYDR543C 300 nt-2.41□□□□□ -2.8
SHH4Q06236 YJL150WYJL150W 303 nt-2.41□□□□□ -2.8
SHH4Q06236 snR80snR80 171 nt-2.42□□□□□ -2.8
SHH4Q06236 YKL106C-AYKL106C-A 120 nt-2.44□□□□□ -2.8
SHH4Q06236 YHR175W-AYHR175W-A 150 nt-2.45□□□□□ -2.8
SHH4Q06236 YOR231C-AYOR231C-A 201 nt-2.48□□□□□ -2.81
SHH4Q06236 snR56snR56 88 nt-2.51□□□□□ -2.81
SHH4Q06236 SOM1YEL059C-A 225 nt-2.51□□□□□ -2.81
SHH4Q06236 YOL083C-AYOL083C-A 141 nt-2.52□□□□□ -2.81
SHH4Q06236 YDR406W-AYDR406W-A 246 nt-2.58□□□□□ -2.82
SHH4Q06236 tR(ACG)Q2tR(ACG)Q2 74 nt-2.58□□□□□ -2.82
SHH4Q06236 YBR109W-AYBR109W-A 225 nt-2.6□□□□□ -2.83
SHH4Q06236 YCR095W-AYCR095W-A 159 nt-2.62□□□□□ -2.83
SHH4Q06236 YBR296C-AYBR296C-A 120 nt-2.64□□□□□ -2.83
SHH4Q06236 YBL053WYBL053W 375 nt-2.66□□□□□ -2.84
SHH4Q06236 RPL41AYDL184C 78 nt-2.68□□□□□ -2.84
SHH4Q06236 YOL166W-AYOL166W-A 156 nt-2.69□□□□□ -2.84
SHH4Q06236 Q0142Q0142 177 nt-2.8□□□□□ -2.86
SHH4Q06236 snR38snR38 95 nt-2.8□□□□□ -2.86
SHH4Q06236 snR6snR6 112 nt-2.81□□□□□ -2.86
SHH4Q06236 YGR151CYGR151C 336 nt-2.86□□□□□ -2.87
SHH4Q06236 YBL071C-BYBL071C-B 99 nt-2.89□□□□□ -2.87
SHH4Q06236 RPL41BYDL133C-A 78 nt-2.9□□□□□ -2.87
SHH4Q06236 snR73snR73 106 nt-2.91□□□□□ -2.88
SHH4Q06236 YOR335W-AYOR335W-A 81 nt-2.93□□□□□ -2.88
SHH4Q06236 YOL164W-AYOL164W-A 183 nt-2.94□□□□□ -2.88
SHH4Q06236 YDR524C-AYDR524C-A 120 nt-2.99□□□□□ -2.89
SHH4Q06236 YMR046W-AYMR046W-A 129 nt-3.04□□□□□ -2.9
SHH4Q06236 YAL037C-AYAL037C-A 93 nt-3.06□□□□□ -2.9
SHH4Q06236 snR47snR47 99 nt-3.06□□□□□ -2.9
SHH4Q06236 YBL100W-CYBL100W-C 120 nt-3.13□□□□□ -2.91
SHH4Q06236 YCL001W-BYCL001W-B 255 nt-3.17□□□□□ -2.92
SHH4Q06236 SPG3YDR504C 384 nt-3.24□□□□□ -2.93
SHH4Q06236 YKL225WYKL225W 348 nt-3.33□□□□□ -2.94
SHH4Q06236 YDL114W-AYDL114W-A 114 nt-3.35□□□□□ -2.95
SHH4Q06236 tV(UAC)QtV(UAC)Q 76 nt-3.35□□□□□ -2.95
SHH4Q06236 snR85snR85 171 nt-3.4□□□□□ -2.95
SHH4Q06236 YNL337WYNL337W 255 nt-3.4□□□□□ -2.95
SHH4Q06236 tS(GCU)Q1tS(GCU)Q1 86 nt-3.41□□□□□ -2.96
SHH4Q06236 tM(CAU)Q1tM(CAU)Q1 76 nt-3.42□□□□□ -2.96
SHH4Q06236 YJR162CYJR162C 351 nt-3.42□□□□□ -2.96
SHH4Q06236 YLR466C-BYLR466C-B 117 nt-3.44□□□□□ -2.96
SHH4Q06236 snR87snR87 109 nt-3.51□□□□□ -2.97
SHH4Q06236 YNL338WYNL338W 159 nt-3.58□□□□□ -2.98
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms