Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 YGR146C-AYGR146C-A 162 nt-1.32□□□□□ -2.62
VPS28Q02767 tF(GAA)QtF(GAA)Q 75 nt-1.35□□□□□ -2.63
VPS28Q02767 YEL014CYEL014C 306 nt-1.35□□□□□ -2.63
VPS28Q02767 YFL019CYFL019C 354 nt-1.35□□□□□ -2.63
VPS28Q02767 YLR222C-AYLR222C-A 231 nt-1.37□□□□□ -2.63
VPS28Q02767 RPL39YJL189W 156 nt-1.4□□□□□ -2.63
VPS28Q02767 snR39BsnR39B 96 nt-1.4□□□□□ -2.63
VPS28Q02767 SKI7YOR076C 2244 nt-1.41□□□□□ -2.64
VPS28Q02767 YDR413CYDR413C 576 nt-1.41□□□□□ -2.64
VPS28Q02767 YER181CYER181C 324 nt-1.41□□□□□ -2.64
VPS28Q02767 YBR131C-AYBR131C-A 90 nt-1.43□□□□□ -2.64
VPS28Q02767 YDR118W-AYDR118W-A 117 nt-1.44□□□□□ -2.64
VPS28Q02767 snR67snR67 82 nt-1.45□□□□□ -2.64
VPS28Q02767 YDL240C-AYDL240C-A 138 nt-1.47□□□□□ -2.64
VPS28Q02767 tY(GUA)QtY(GUA)Q 84 nt-1.47□□□□□ -2.64
VPS28Q02767 YNL277W-AYNL277W-A 189 nt-1.47□□□□□ -2.64
VPS28Q02767 tD(GUC)QtD(GUC)Q 75 nt-1.48□□□□□ -2.65
VPS28Q02767 YOR329W-AYOR329W-A 210 nt-1.48□□□□□ -2.65
VPS28Q02767 YLR286W-AYLR286W-A 135 nt-1.51□□□□□ -2.65
VPS28Q02767 YKL118WYKL118W 312 nt-1.52□□□□□ -2.65
VPS28Q02767 YNL097C-BYNL097C-B 123 nt-1.52□□□□□ -2.65
VPS28Q02767 snR55snR55 98 nt-1.58□□□□□ -2.66
VPS28Q02767 CDC65tQ(CUG)M 72 nt-1.58□□□□□ -2.66
VPS28Q02767 VAR1Q0140 1197 nt-1.59□□□□□ -2.66
VPS28Q02767 YBR178WYBR178W 375 nt-1.59□□□□□ -2.66
VPS28Q02767 YDL159C-BYDL159C-B 177 nt-1.6□□□□□ -2.67
VPS28Q02767 YML054C-AYML054C-A 159 nt-1.6□□□□□ -2.67
VPS28Q02767 GIM4YEL003W 336 nt-1.61□□□□□ -2.67
VPS28Q02767 YNL205CYNL205C 423 nt-1.61□□□□□ -2.67
VPS28Q02767 YGR240C-AYGR240C-A 201 nt-1.63□□□□□ -2.67
VPS28Q02767 YPR012WYPR012W 255 nt-1.63□□□□□ -2.67
VPS28Q02767 snR77snR77 88 nt-1.66□□□□□ -2.68
VPS28Q02767 snR81snR81 201 nt-1.66□□□□□ -2.68
VPS28Q02767 snR48snR48 113 nt-1.66□□□□□ -2.68
VPS28Q02767 YMR315W-AYMR315W-A 108 nt-1.7□□□□□ -2.68
VPS28Q02767 YNR077CYNR077C 255 nt-1.7□□□□□ -2.68
VPS28Q02767 YOR302WYOR302W 78 nt-1.73□□□□□ -2.69
VPS28Q02767 YOL155W-AYOL155W-A 135 nt-1.74□□□□□ -2.69
VPS28Q02767 tL(UAA)QtL(UAA)Q 85 nt-1.77□□□□□ -2.69
VPS28Q02767 YOR102WYOR102W 351 nt-1.79□□□□□ -2.7
VPS28Q02767 YGL188C-AYGL188C-A 141 nt-1.81□□□□□ -2.7
VPS28Q02767 YLR299C-AYLR299C-A 93 nt-1.81□□□□□ -2.7
VPS28Q02767 YPL152W-AYPL152W-A 99 nt-1.82□□□□□ -2.7
VPS28Q02767 snR65snR65 100 nt-1.87□□□□□ -2.71
VPS28Q02767 YBR196C-AYBR196C-A 150 nt-1.89□□□□□ -2.71
VPS28Q02767 YLR342W-AYLR342W-A 174 nt-1.92□□□□□ -2.72
VPS28Q02767 snR52snR52 92 nt-1.92□□□□□ -2.72
VPS28Q02767 YOR376W-AYOR376W-A 156 nt-1.94□□□□□ -2.72
VPS28Q02767 YHL015W-AYHL015W-A 84 nt-1.98□□□□□ -2.73
VPS28Q02767 YOR309CYOR309C 381 nt-2□□□□□ -2.73
VPS28Q02767 YBR126W-BYBR126W-B 144 nt-2.03□□□□□ -2.73
VPS28Q02767 Q0144Q0144 330 nt-2.05□□□□□ -2.74
VPS28Q02767 YHR180C-BYHR180C-B 105 nt-2.1□□□□□ -2.75
VPS28Q02767 YNL198CYNL198C 303 nt-2.1□□□□□ -2.75
VPS28Q02767 snR80snR80 171 nt-2.13□□□□□ -2.75
VPS28Q02767 YOR316C-AYOR316C-A 210 nt-2.14□□□□□ -2.75
VPS28Q02767 YJL150WYJL150W 303 nt-2.17□□□□□ -2.76
VPS28Q02767 YHR175W-AYHR175W-A 150 nt-2.18□□□□□ -2.76
VPS28Q02767 YKL106C-AYKL106C-A 120 nt-2.18□□□□□ -2.76
VPS28Q02767 YOR231C-AYOR231C-A 201 nt-2.18□□□□□ -2.76
VPS28Q02767 YDR524W-CYDR524W-C 90 nt-2.25□□□□□ -2.77
VPS28Q02767 snR56snR56 88 nt-2.27□□□□□ -2.77
VPS28Q02767 SOM1YEL059C-A 225 nt-2.27□□□□□ -2.77
VPS28Q02767 tR(ACG)Q2tR(ACG)Q2 74 nt-2.28□□□□□ -2.77
VPS28Q02767 YBR109W-AYBR109W-A 225 nt-2.33□□□□□ -2.78
VPS28Q02767 YBL053WYBL053W 375 nt-2.34□□□□□ -2.78
VPS28Q02767 YDR406W-AYDR406W-A 246 nt-2.35□□□□□ -2.79
VPS28Q02767 YCR095W-AYCR095W-A 159 nt-2.37□□□□□ -2.79
VPS28Q02767 YOL083C-AYOL083C-A 141 nt-2.39□□□□□ -2.79
VPS28Q02767 YBR296C-AYBR296C-A 120 nt-2.39□□□□□ -2.79
VPS28Q02767 RPL41AYDL184C 78 nt-2.44□□□□□ -2.8
VPS28Q02767 snR6snR6 112 nt-2.47□□□□□ -2.8
VPS28Q02767 snR38snR38 95 nt-2.49□□□□□ -2.81
VPS28Q02767 YOR335W-AYOR335W-A 81 nt-2.56□□□□□ -2.82
VPS28Q02767 YGR151CYGR151C 336 nt-2.57□□□□□ -2.82
VPS28Q02767 YBL071C-BYBL071C-B 99 nt-2.57□□□□□ -2.82
VPS28Q02767 RPL41BYDL133C-A 78 nt-2.58□□□□□ -2.82
VPS28Q02767 snR73snR73 106 nt-2.59□□□□□ -2.82
VPS28Q02767 YOL164W-AYOL164W-A 183 nt-2.64□□□□□ -2.83
VPS28Q02767 YMR046W-AYMR046W-A 129 nt-2.74□□□□□ -2.85
VPS28Q02767 YAL037C-AYAL037C-A 93 nt-2.75□□□□□ -2.85
VPS28Q02767 snR47snR47 99 nt-2.77□□□□□ -2.85
VPS28Q02767 YDR524C-AYDR524C-A 120 nt-2.82□□□□□ -2.86
VPS28Q02767 YDR543CYDR543C 300 nt-2.85□□□□□ -2.87
VPS28Q02767 YCL001W-BYCL001W-B 255 nt-2.85□□□□□ -2.87
VPS28Q02767 YBL100W-CYBL100W-C 120 nt-2.87□□□□□ -2.87
VPS28Q02767 SPG3YDR504C 384 nt-2.9□□□□□ -2.87
VPS28Q02767 YDL114W-AYDL114W-A 114 nt-2.94□□□□□ -2.88
VPS28Q02767 snR85snR85 171 nt-2.95□□□□□ -2.88
VPS28Q02767 tV(UAC)QtV(UAC)Q 76 nt-2.99□□□□□ -2.89
VPS28Q02767 YKL225WYKL225W 348 nt-3□□□□□ -2.89
VPS28Q02767 tS(GCU)Q1tS(GCU)Q1 86 nt-3.06□□□□□ -2.9
VPS28Q02767 tM(CAU)Q1tM(CAU)Q1 76 nt-3.08□□□□□ -2.9
VPS28Q02767 YLR466C-BYLR466C-B 117 nt-3.09□□□□□ -2.9
VPS28Q02767 YNL337WYNL337W 255 nt-3.1□□□□□ -2.91
VPS28Q02767 snR87snR87 109 nt-3.22□□□□□ -2.92
VPS28Q02767 YNL338WYNL338W 159 nt-3.22□□□□□ -2.92
VPS28Q02767 YGR122C-AYGR122C-A 129 nt-3.36□□□□□ -2.95
VPS28Q02767 YDL159W-AYDL159W-A 132 nt-3.38□□□□□ -2.95
VPS28Q02767 YKL096C-BYKL096C-B 150 nt-3.38□□□□□ -2.95
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms