Protein–RNA interactions for Protein: Q00416

SEN1, Helicase SEN1, yeastyeast

Known RBP Predictions only

Length 2,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEN1Q00416 YBR178WYBR178W 375 nt-1.84□□□□□ -2.7
SEN1Q00416 YLR434CYLR434C 384 nt-1.86□□□□□ -2.71
SEN1Q00416 YLR406C-AYLR406C-A 150 nt-1.87□□□□□ -2.71
SEN1Q00416 HTL1YCR020W-B 237 nt-1.88□□□□□ -2.71
SEN1Q00416 tW(UCA)QtW(UCA)Q 74 nt-1.88□□□□□ -2.71
SEN1Q00416 YKL118WYKL118W 312 nt-1.88□□□□□ -2.71
SEN1Q00416 YNL122CYNL122C 348 nt-1.89□□□□□ -2.71
SEN1Q00416 tM(CAU)Q2tM(CAU)Q2 78 nt-1.9□□□□□ -2.71
SEN1Q00416 YEL014CYEL014C 306 nt-1.9□□□□□ -2.71
SEN1Q00416 YDR524W-CYDR524W-C 90 nt-1.91□□□□□ -2.71
SEN1Q00416 STE18YJR086W 333 nt-1.91□□□□□ -2.72
SEN1Q00416 YLR120W-AYLR120W-A 102 nt-1.92□□□□□ -2.72
SEN1Q00416 YLR286W-AYLR286W-A 135 nt-1.93□□□□□ -2.72
SEN1Q00416 YNL028WYNL028W 318 nt-1.93□□□□□ -2.72
SEN1Q00416 YPR197CYPR197C 564 nt-1.94□□□□□ -2.72
SEN1Q00416 YER181CYER181C 324 nt-1.95□□□□□ -2.72
SEN1Q00416 YPL038W-AYPL038W-A 192 nt-1.95□□□□□ -2.72
SEN1Q00416 YLR285C-AYLR285C-A 171 nt-1.97□□□□□ -2.72
SEN1Q00416 YNL324WYNL324W 396 nt-1.97□□□□□ -2.72
SEN1Q00416 YOL038C-AYOL038C-A 96 nt-1.97□□□□□ -2.72
SEN1Q00416 YJR157WYJR157W 363 nt-1.98□□□□□ -2.73
SEN1Q00416 Q0255Q0255 1419 nt-1.98□□□□□ -2.73
SEN1Q00416 YJL150WYJL150W 303 nt-1.99□□□□□ -2.73
SEN1Q00416 YOL083C-AYOL083C-A 141 nt-1.99□□□□□ -2.73
SEN1Q00416 YGL041CYGL041C 204 nt-2.03□□□□□ -2.73
SEN1Q00416 snR78snR78 87 nt-2.03□□□□□ -2.74
SEN1Q00416 YDL159C-BYDL159C-B 177 nt-2.04□□□□□ -2.74
SEN1Q00416 YOR381W-AYOR381W-A 168 nt-2.04□□□□□ -2.74
SEN1Q00416 RPL41AYDL184C 78 nt-2.06□□□□□ -2.74
SEN1Q00416 YGR035CYGR035C 351 nt-2.06□□□□□ -2.74
SEN1Q00416 snR80snR80 171 nt-2.06□□□□□ -2.74
SEN1Q00416 YPR012WYPR012W 255 nt-2.06□□□□□ -2.74
SEN1Q00416 BIL1YOR304C-A 231 nt-2.08□□□□□ -2.74
SEN1Q00416 YOL155W-AYOL155W-A 135 nt-2.1□□□□□ -2.75
SEN1Q00416 YDR413CYDR413C 576 nt-2.1□□□□□ -2.75
SEN1Q00416 YDR524C-AYDR524C-A 120 nt-2.14□□□□□ -2.75
SEN1Q00416 YDR183C-AYDR183C-A 258 nt-2.15□□□□□ -2.75
SEN1Q00416 YOR335W-AYOR335W-A 81 nt-2.17□□□□□ -2.76
SEN1Q00416 YKL106C-AYKL106C-A 120 nt-2.18□□□□□ -2.76
SEN1Q00416 YLR222C-AYLR222C-A 231 nt-2.18□□□□□ -2.76
SEN1Q00416 YKL123WYKL123W 381 nt-2.18□□□□□ -2.76
SEN1Q00416 YNL198CYNL198C 303 nt-2.18□□□□□ -2.76
SEN1Q00416 tL(UAA)QtL(UAA)Q 85 nt-2.19□□□□□ -2.76
SEN1Q00416 snR55snR55 98 nt-2.21□□□□□ -2.76
SEN1Q00416 YBR131C-AYBR131C-A 90 nt-2.21□□□□□ -2.76
SEN1Q00416 YBR296C-AYBR296C-A 120 nt-2.23□□□□□ -2.77
SEN1Q00416 YAL063C-AYAL063C-A 291 nt-2.23□□□□□ -2.77
SEN1Q00416 snR48snR48 113 nt-2.24□□□□□ -2.77
SEN1Q00416 YGL188C-AYGL188C-A 141 nt-2.27□□□□□ -2.77
SEN1Q00416 YHL015W-AYHL015W-A 84 nt-2.3□□□□□ -2.78
SEN1Q00416 snR73snR73 106 nt-2.3□□□□□ -2.78
SEN1Q00416 snR38snR38 95 nt-2.3□□□□□ -2.78
SEN1Q00416 YNR025CYNR025C 360 nt-2.32□□□□□ -2.78
SEN1Q00416 snR6snR6 112 nt-2.34□□□□□ -2.78
SEN1Q00416 YOR102WYOR102W 351 nt-2.34□□□□□ -2.78
SEN1Q00416 tF(GAA)QtF(GAA)Q 75 nt-2.39□□□□□ -2.79
SEN1Q00416 YNL097C-BYNL097C-B 123 nt-2.39□□□□□ -2.79
SEN1Q00416 RPL39YJL189W 156 nt-2.4□□□□□ -2.79
SEN1Q00416 GIM4YEL003W 336 nt-2.43□□□□□ -2.8
SEN1Q00416 YBR109W-AYBR109W-A 225 nt-2.43□□□□□ -2.8
SEN1Q00416 RPL41BYDL133C-A 78 nt-2.44□□□□□ -2.8
SEN1Q00416 YDR406W-AYDR406W-A 246 nt-2.44□□□□□ -2.8
SEN1Q00416 snR56snR56 88 nt-2.52□□□□□ -2.81
SEN1Q00416 YOR302WYOR302W 78 nt-2.53□□□□□ -2.81
SEN1Q00416 YBL071C-BYBL071C-B 99 nt-2.58□□□□□ -2.82
SEN1Q00416 tV(UAC)QtV(UAC)Q 76 nt-2.59□□□□□ -2.82
SEN1Q00416 YCR095W-AYCR095W-A 159 nt-2.6□□□□□ -2.83
SEN1Q00416 SOM1YEL059C-A 225 nt-2.62□□□□□ -2.83
SEN1Q00416 snR52snR52 92 nt-2.64□□□□□ -2.83
SEN1Q00416 tR(UCU)Q1tR(UCU)Q1 73 nt-2.67□□□□□ -2.84
SEN1Q00416 YDR157WYDR157W 402 nt-2.68□□□□□ -2.84
SEN1Q00416 snR87snR87 109 nt-2.71□□□□□ -2.84
SEN1Q00416 YGR151CYGR151C 336 nt-2.72□□□□□ -2.84
SEN1Q00416 YNL277W-AYNL277W-A 189 nt-2.72□□□□□ -2.85
SEN1Q00416 YDL240C-AYDL240C-A 138 nt-2.74□□□□□ -2.85
SEN1Q00416 YDL114W-AYDL114W-A 114 nt-2.75□□□□□ -2.85
SEN1Q00416 YOL164W-AYOL164W-A 183 nt-2.77□□□□□ -2.85
SEN1Q00416 YPL152W-AYPL152W-A 99 nt-2.78□□□□□ -2.86
SEN1Q00416 snR47snR47 99 nt-2.78□□□□□ -2.86
SEN1Q00416 snR85snR85 171 nt-2.82□□□□□ -2.86
SEN1Q00416 YJL136W-AYJL136W-A 84 nt-2.85□□□□□ -2.87
SEN1Q00416 SPG3YDR504C 384 nt-2.87□□□□□ -2.87
SEN1Q00416 snR65snR65 100 nt-2.89□□□□□ -2.87
SEN1Q00416 YAL037C-AYAL037C-A 93 nt-2.9□□□□□ -2.87
SEN1Q00416 YBL053WYBL053W 375 nt-2.9□□□□□ -2.87
SEN1Q00416 snR58snR58 96 nt-2.91□□□□□ -2.88
SEN1Q00416 YDR118W-AYDR118W-A 117 nt-2.93□□□□□ -2.88
SEN1Q00416 YGR122C-AYGR122C-A 129 nt-2.93□□□□□ -2.88
SEN1Q00416 YEL050W-AYEL050W-A 192 nt-2.95□□□□□ -2.88
SEN1Q00416 YKL225WYKL225W 348 nt-2.95□□□□□ -2.88
SEN1Q00416 YBL100W-CYBL100W-C 120 nt-2.95□□□□□ -2.88
SEN1Q00416 tS(GCU)Q1tS(GCU)Q1 86 nt-2.98□□□□□ -2.89
SEN1Q00416 YDL159W-AYDL159W-A 132 nt-3.04□□□□□ -2.9
SEN1Q00416 YHR175W-AYHR175W-A 150 nt-3.04□□□□□ -2.9
SEN1Q00416 Q0017Q0017 162 nt-3.18□□□□□ -2.92
SEN1Q00416 YKL096C-BYKL096C-B 150 nt-3.19□□□□□ -2.92
SEN1Q00416 YCL001W-BYCL001W-B 255 nt-3.25□□□□□ -2.93
SEN1Q00416 YNL170WYNL170W 396 nt-3.25□□□□□ -2.93
SEN1Q00416 YDR034C-AYDR034C-A 177 nt-3.27□□□□□ -2.93
SEN1Q00416 tC(GCA)QtC(GCA)Q 76 nt-3.33□□□□□ -2.94
Retrieved 100 of 7,029 protein–RNA pairs in 39.1 ms