Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.95■■□□□ 1.1
PMS1P54277 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.95■■□□□ 1.1
PMS1P54277 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PMS1P54277 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
PMS1P54277 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.94■■□□□ 1.1
PMS1P54277 MIR663A-201ENST00000385250 93 ntBASIC21.94■■□□□ 1.1
PMS1P54277 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.94■■□□□ 1.1
PMS1P54277 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.94■■□□□ 1.1
PMS1P54277 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.94■■□□□ 1.1
PMS1P54277 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.94■■□□□ 1.1
PMS1P54277 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.94■■□□□ 1.1
PMS1P54277 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS1P54277 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PMS1P54277 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.93■■□□□ 1.1
PMS1P54277 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PMS1P54277 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PMS1P54277 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.93■■□□□ 1.1
PMS1P54277 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.93■■□□□ 1.1
PMS1P54277 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.93■■□□□ 1.1
PMS1P54277 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.93■■□□□ 1.1
PMS1P54277 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.93■■□□□ 1.1
PMS1P54277 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.93■■□□□ 1.1
PMS1P54277 AC009237.14-201ENST00000609975 1594 ntBASIC21.93■■□□□ 1.1
PMS1P54277 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS1P54277 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.93■■□□□ 1.1
PMS1P54277 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.92■■□□□ 1.1
PMS1P54277 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.92■■□□□ 1.1
PMS1P54277 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.92■■□□□ 1.1
PMS1P54277 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.92■■□□□ 1.1
PMS1P54277 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.92■■□□□ 1.1
PMS1P54277 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.92■■□□□ 1.1
PMS1P54277 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
PMS1P54277 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 AC026185.1-201ENST00000445748 174 ntBASIC21.92■■□□□ 1.1
PMS1P54277 AC105036.2-201ENST00000569468 176 ntBASIC21.92■■□□□ 1.1
PMS1P54277 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.92■■□□□ 1.1
PMS1P54277 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.92■■□□□ 1.1
PMS1P54277 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS1P54277 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PMS1P54277 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PMS1P54277 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.91■■□□□ 1.1
PMS1P54277 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PMS1P54277 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS1P54277 MKRN4P-201ENST00000444706 1521 ntBASIC21.9■■□□□ 1.1
PMS1P54277 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.9■■□□□ 1.1
PMS1P54277 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.9■■□□□ 1.1
PMS1P54277 KRT16P6-202ENST00000425692 1426 ntBASIC21.9■■□□□ 1.1
PMS1P54277 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PMS1P54277 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.9■■□□□ 1.1
PMS1P54277 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.9■■□□□ 1.1
PMS1P54277 AF201337.1-201ENST00000520239 748 ntBASIC21.9■■□□□ 1.1
PMS1P54277 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.9■■□□□ 1.1
PMS1P54277 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
PMS1P54277 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
PMS1P54277 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms