Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 snR69snR69 101 nt-0.95□□□□□ -2.56
TRM9P49957 tM(CAU)Q2tM(CAU)Q2 78 nt-0.96□□□□□ -2.56
TRM9P49957 YNR077CYNR077C 255 nt-0.96□□□□□ -2.56
TRM9P49957 YOR170WYOR170W 306 nt-0.96□□□□□ -2.56
TRM9P49957 YOR381W-AYOR381W-A 168 nt-0.96□□□□□ -2.56
TRM9P49957 YBR223W-AYBR223W-A 120 nt-0.96□□□□□ -2.56
TRM9P49957 YJL182CYJL182C 318 nt-0.98□□□□□ -2.57
TRM9P49957 snR49snR49 165 nt-0.99□□□□□ -2.57
TRM9P49957 YEL014CYEL014C 306 nt-1.01□□□□□ -2.57
TRM9P49957 YGR146C-AYGR146C-A 162 nt-1.01□□□□□ -2.57
TRM9P49957 snR55snR55 98 nt-1.02□□□□□ -2.57
TRM9P49957 YER090C-AYER090C-A 90 nt-1.02□□□□□ -2.57
TRM9P49957 RDS3YPR094W 324 nt-1.04□□□□□ -2.58
TRM9P49957 YBR131C-AYBR131C-A 90 nt-1.04□□□□□ -2.58
TRM9P49957 snR39BsnR39B 96 nt-1.05□□□□□ -2.58
TRM9P49957 PMP2YEL017C-A 132 nt-1.07□□□□□ -2.58
TRM9P49957 YNL266WYNL266W 420 nt-1.1□□□□□ -2.59
TRM9P49957 snR50snR50 90 nt-1.12□□□□□ -2.59
TRM9P49957 YNL097C-BYNL097C-B 123 nt-1.15□□□□□ -2.59
TRM9P49957 YOR329W-AYOR329W-A 210 nt-1.16□□□□□ -2.6
TRM9P49957 YOL155W-AYOL155W-A 135 nt-1.17□□□□□ -2.6
TRM9P49957 tP(UGG)QtP(UGG)Q 72 nt-1.18□□□□□ -2.6
TRM9P49957 snR65snR65 100 nt-1.21□□□□□ -2.6
TRM9P49957 tD(GUC)QtD(GUC)Q 75 nt-1.23□□□□□ -2.61
TRM9P49957 snR67snR67 82 nt-1.25□□□□□ -2.61
TRM9P49957 JLP2YMR132C 627 nt-1.26□□□□□ -2.61
TRM9P49957 YPL152W-AYPL152W-A 99 nt-1.26□□□□□ -2.61
TRM9P49957 YLR286W-AYLR286W-A 135 nt-1.28□□□□□ -2.61
TRM9P49957 YNL205CYNL205C 423 nt-1.28□□□□□ -2.61
TRM9P49957 YHR175W-AYHR175W-A 150 nt-1.3□□□□□ -2.62
TRM9P49957 YOR302WYOR302W 78 nt-1.3□□□□□ -2.62
TRM9P49957 snR48snR48 113 nt-1.3□□□□□ -2.62
TRM9P49957 YDL159C-BYDL159C-B 177 nt-1.35□□□□□ -2.63
TRM9P49957 YBR178WYBR178W 375 nt-1.35□□□□□ -2.63
TRM9P49957 YGL188C-AYGL188C-A 141 nt-1.37□□□□□ -2.63
TRM9P49957 YLR342W-AYLR342W-A 174 nt-1.39□□□□□ -2.63
TRM9P49957 YOR102WYOR102W 351 nt-1.39□□□□□ -2.63
TRM9P49957 SKI7YOR076C 2244 nt-1.4□□□□□ -2.63
TRM9P49957 snR56snR56 88 nt-1.43□□□□□ -2.64
TRM9P49957 tR(ACG)Q2tR(ACG)Q2 74 nt-1.43□□□□□ -2.64
TRM9P49957 snR52snR52 92 nt-1.43□□□□□ -2.64
TRM9P49957 tL(UAA)QtL(UAA)Q 85 nt-1.45□□□□□ -2.64
TRM9P49957 tY(GUA)QtY(GUA)Q 84 nt-1.5□□□□□ -2.65
TRM9P49957 YHL015W-AYHL015W-A 84 nt-1.51□□□□□ -2.65
TRM9P49957 YOR231C-AYOR231C-A 201 nt-1.53□□□□□ -2.65
TRM9P49957 YLR299C-AYLR299C-A 93 nt-1.54□□□□□ -2.66
TRM9P49957 YML054C-AYML054C-A 159 nt-1.54□□□□□ -2.66
TRM9P49957 YBR196C-AYBR196C-A 150 nt-1.56□□□□□ -2.66
TRM9P49957 snR80snR80 171 nt-1.62□□□□□ -2.67
TRM9P49957 CDC65tQ(CUG)M 72 nt-1.63□□□□□ -2.67
TRM9P49957 YDR524W-CYDR524W-C 90 nt-1.64□□□□□ -2.67
TRM9P49957 snR77snR77 88 nt-1.7□□□□□ -2.68
TRM9P49957 YGR240C-AYGR240C-A 201 nt-1.71□□□□□ -2.68
TRM9P49957 YNL198CYNL198C 303 nt-1.72□□□□□ -2.68
TRM9P49957 YDR406W-AYDR406W-A 246 nt-1.74□□□□□ -2.69
TRM9P49957 snR81snR81 201 nt-1.76□□□□□ -2.69
TRM9P49957 YMR315W-AYMR315W-A 108 nt-1.79□□□□□ -2.7
TRM9P49957 YHR180C-BYHR180C-B 105 nt-1.82□□□□□ -2.7
TRM9P49957 SOM1YEL059C-A 225 nt-1.86□□□□□ -2.71
TRM9P49957 YOR376W-AYOR376W-A 156 nt-1.89□□□□□ -2.71
TRM9P49957 YBR126W-BYBR126W-B 144 nt-1.9□□□□□ -2.71
TRM9P49957 YJL150WYJL150W 303 nt-1.91□□□□□ -2.72
TRM9P49957 YCR095W-AYCR095W-A 159 nt-1.93□□□□□ -2.72
TRM9P49957 YBL053WYBL053W 375 nt-2.01□□□□□ -2.73
TRM9P49957 YOR316C-AYOR316C-A 210 nt-2.02□□□□□ -2.73
TRM9P49957 YKL106C-AYKL106C-A 120 nt-2.04□□□□□ -2.74
TRM9P49957 YMR046W-AYMR046W-A 129 nt-2.05□□□□□ -2.74
TRM9P49957 YOR309CYOR309C 381 nt-2.05□□□□□ -2.74
TRM9P49957 YBR296C-AYBR296C-A 120 nt-2.13□□□□□ -2.75
TRM9P49957 RPL41AYDL184C 78 nt-2.16□□□□□ -2.76
TRM9P49957 YBR109W-AYBR109W-A 225 nt-2.18□□□□□ -2.76
TRM9P49957 YDR543CYDR543C 300 nt-2.23□□□□□ -2.77
TRM9P49957 YGR151CYGR151C 336 nt-2.23□□□□□ -2.77
TRM9P49957 SPG3YDR504C 384 nt-2.28□□□□□ -2.77
TRM9P49957 YOL083C-AYOL083C-A 141 nt-2.28□□□□□ -2.77
TRM9P49957 YBL071C-BYBL071C-B 99 nt-2.32□□□□□ -2.78
TRM9P49957 tM(CAU)Q1tM(CAU)Q1 76 nt-2.34□□□□□ -2.78
TRM9P49957 YOL164W-AYOL164W-A 183 nt-2.36□□□□□ -2.79
TRM9P49957 snR38snR38 95 nt-2.36□□□□□ -2.79
TRM9P49957 YOL166W-AYOL166W-A 156 nt-2.38□□□□□ -2.79
TRM9P49957 Q0142Q0142 177 nt-2.39□□□□□ -2.79
TRM9P49957 YAL037C-AYAL037C-A 93 nt-2.41□□□□□ -2.8
TRM9P49957 YCL001W-BYCL001W-B 255 nt-2.43□□□□□ -2.8
TRM9P49957 YBL100W-CYBL100W-C 120 nt-2.47□□□□□ -2.8
TRM9P49957 YLR466C-BYLR466C-B 117 nt-2.49□□□□□ -2.81
TRM9P49957 snR47snR47 99 nt-2.49□□□□□ -2.81
TRM9P49957 snR6snR6 112 nt-2.55□□□□□ -2.82
TRM9P49957 YNL338WYNL338W 159 nt-2.65□□□□□ -2.83
TRM9P49957 YNL337WYNL337W 255 nt-2.67□□□□□ -2.84
TRM9P49957 YOR335W-AYOR335W-A 81 nt-2.67□□□□□ -2.84
TRM9P49957 snR73snR73 106 nt-2.68□□□□□ -2.84
TRM9P49957 YKL225WYKL225W 348 nt-2.76□□□□□ -2.85
TRM9P49957 RPL41BYDL133C-A 78 nt-2.78□□□□□ -2.85
TRM9P49957 tS(GCU)Q1tS(GCU)Q1 86 nt-2.83□□□□□ -2.86
TRM9P49957 YDL114W-AYDL114W-A 114 nt-2.86□□□□□ -2.87
TRM9P49957 tV(UAC)QtV(UAC)Q 76 nt-2.9□□□□□ -2.87
TRM9P49957 YDR524C-AYDR524C-A 120 nt-2.94□□□□□ -2.88
TRM9P49957 snR85snR85 171 nt-2.98□□□□□ -2.89
TRM9P49957 Q0032Q0032 291 nt-2.99□□□□□ -2.89
TRM9P49957 YGL041C-BYGL041C-B 183 nt-3.01□□□□□ -2.89
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms