Protein–RNA interactions for Protein: P48562

CLA4, Serine/threonine-protein kinase CLA4, yeastyeast

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLA4P48562 ATG9YDL149W 2994 nt1.85□□□□□ -2.11
CLA4P48562 BRR2YER172C 6492 nt1.85□□□□□ -2.11
CLA4P48562 YHR214C-BYHR214C-B 5382 nt1.84□□□□□ -2.12
CLA4P48562 SWI4YER111C 3282 nt1.84□□□□□ -2.12
CLA4P48562 CFT1YDR301W 4074 nt1.83□□□□□ -2.12
CLA4P48562 YER090C-AYER090C-A 90 nt1.82□□□□□ -2.12
CLA4P48562 YLL006W-AYLL006W-A 177 nt1.82□□□□□ -2.12
CLA4P48562 TMA7YLR262C-A 195 nt1.82□□□□□ -2.12
CLA4P48562 UBR2YLR024C 5619 nt1.82□□□□□ -2.12
CLA4P48562 YMR045CYMR045C 5268 nt1.81□□□□□ -2.12
CLA4P48562 snR40snR40 97 nt1.8□□□□□ -2.12
CLA4P48562 LAA1YJL207C 6045 nt1.76□□□□□ -2.13
CLA4P48562 tV(UAC)QtV(UAC)Q 76 nt1.73□□□□□ -2.13
CLA4P48562 snR67snR67 82 nt1.72□□□□□ -2.13
CLA4P48562 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
CLA4P48562 YLR419WYLR419W 4308 nt1.72□□□□□ -2.13
CLA4P48562 YKL106C-AYKL106C-A 120 nt1.71□□□□□ -2.14
CLA4P48562 IML1YJR138W 4755 nt1.7□□□□□ -2.14
CLA4P48562 NUP188YML103C 4968 nt1.69□□□□□ -2.14
CLA4P48562 YMR247W-AYMR247W-A 144 nt1.67□□□□□ -2.14
CLA4P48562 YNL284C-BYNL284C-B 5268 nt1.67□□□□□ -2.14
CLA4P48562 BPH1YCR032W 6504 nt1.66□□□□□ -2.14
CLA4P48562 tF(GAA)BtF(GAA)B 73 nt1.64□□□□□ -2.15
CLA4P48562 tF(GAA)FtF(GAA)F 73 nt1.64□□□□□ -2.15
CLA4P48562 tF(GAA)GtF(GAA)G 73 nt1.64□□□□□ -2.15
CLA4P48562 tF(GAA)H1tF(GAA)H1 73 nt1.64□□□□□ -2.15
CLA4P48562 tF(GAA)H2tF(GAA)H2 73 nt1.64□□□□□ -2.15
CLA4P48562 tF(GAA)MtF(GAA)M 73 nt1.64□□□□□ -2.15
CLA4P48562 tF(GAA)P1tF(GAA)P1 73 nt1.64□□□□□ -2.15
CLA4P48562 tF(GAA)P2tF(GAA)P2 73 nt1.64□□□□□ -2.15
CLA4P48562 MEC1YBR136W 7107 nt1.64□□□□□ -2.15
CLA4P48562 VPS15YBR097W 4365 nt1.63□□□□□ -2.15
CLA4P48562 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
CLA4P48562 YMR160WYMR160W 2451 nt1.61□□□□□ -2.15
CLA4P48562 BST1YFL025C 3090 nt1.6□□□□□ -2.15
CLA4P48562 MON2YNL297C 4911 nt1.59□□□□□ -2.15
CLA4P48562 SPT7YBR081C 3999 nt1.59□□□□□ -2.16
CLA4P48562 UTP20YBL004W 7482 nt1.57□□□□□ -2.16
CLA4P48562 DOP1YDR141C 5097 nt1.54□□□□□ -2.16
CLA4P48562 IRA1YBR140C 9279 nt1.54□□□□□ -2.16
CLA4P48562 TRM732YMR259C 4263 nt1.52□□□□□ -2.17
CLA4P48562 tH(GUG)E1tH(GUG)E1 72 nt1.51□□□□□ -2.17
CLA4P48562 tH(GUG)E2tH(GUG)E2 72 nt1.51□□□□□ -2.17
CLA4P48562 tH(GUG)G1tH(GUG)G1 72 nt1.51□□□□□ -2.17
CLA4P48562 tH(GUG)G2tH(GUG)G2 72 nt1.51□□□□□ -2.17
CLA4P48562 tH(GUG)HtH(GUG)H 72 nt1.51□□□□□ -2.17
CLA4P48562 tH(GUG)KtH(GUG)K 72 nt1.51□□□□□ -2.17
CLA4P48562 tH(GUG)MtH(GUG)M 72 nt1.51□□□□□ -2.17
CLA4P48562 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
CLA4P48562 tV(UAC)BtV(UAC)B 74 nt1.49□□□□□ -2.17
CLA4P48562 tV(UAC)DtV(UAC)D 74 nt1.49□□□□□ -2.17
CLA4P48562 tQ(UUG)E2tQ(UUG)E2 72 nt1.48□□□□□ -2.17
CLA4P48562 YOL014WYOL014W 375 nt1.46□□□□□ -2.18
CLA4P48562 VAM6YDL077C 3150 nt1.45□□□□□ -2.18
CLA4P48562 YNL054W-BYNL054W-B 5250 nt1.41□□□□□ -2.18
CLA4P48562 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
CLA4P48562 YPR117WYPR117W 7470 nt1.36□□□□□ -2.19
CLA4P48562 snR77snR77 88 nt1.35□□□□□ -2.19
CLA4P48562 YOR316C-AYOR316C-A 210 nt1.32□□□□□ -2.2
CLA4P48562 YOR192C-BYOR192C-B 5313 nt1.29□□□□□ -2.2
CLA4P48562 LTE1YAL024C 4308 nt1.29□□□□□ -2.2
CLA4P48562 SBH2YER019C-A 267 nt1.25□□□□□ -2.21
CLA4P48562 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
CLA4P48562 YJR029WYJR029W 5268 nt1.2□□□□□ -2.22
CLA4P48562 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
CLA4P48562 SCC2YDR180W 4482 nt1.15□□□□□ -2.23
CLA4P48562 YKL145W-AYKL145W-A 93 nt1.15□□□□□ -2.23
CLA4P48562 MYO1YHR023W 5787 nt1.13□□□□□ -2.23
CLA4P48562 RKR1YMR247C 4689 nt1.13□□□□□ -2.23
CLA4P48562 MLP1YKR095W 5628 nt1.12□□□□□ -2.23
CLA4P48562 BEM2YER155C 6504 nt1.12□□□□□ -2.23
CLA4P48562 YBL100W-BYBL100W-B 5313 nt1.11□□□□□ -2.23
CLA4P48562 YML100W-AYML100W-A 174 nt1.07□□□□□ -2.24
CLA4P48562 SOV1YMR066W 2697 nt1.05□□□□□ -2.24
CLA4P48562 YOR186C-AYOR186C-A 210 nt1.01□□□□□ -2.25
CLA4P48562 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
CLA4P48562 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
CLA4P48562 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
CLA4P48562 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
CLA4P48562 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
CLA4P48562 IQG1YPL242C 4488 nt0.95□□□□□ -2.26
CLA4P48562 THO2YNL139C 4794 nt0.95□□□□□ -2.26
CLA4P48562 YJL113WYJL113W 4647 nt0.91□□□□□ -2.26
CLA4P48562 tC(GCA)QtC(GCA)Q 76 nt0.87□□□□□ -2.27
CLA4P48562 ESP1YGR098C 4893 nt0.86□□□□□ -2.27
CLA4P48562 tT(AGU)BtT(AGU)B 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)CtT(AGU)C 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)DtT(AGU)D 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)HtT(AGU)H 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)I1tT(AGU)I1 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)I2tT(AGU)I2 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)JtT(AGU)J 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)N1tT(AGU)N1 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)N2tT(AGU)N2 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)O1tT(AGU)O1 73 nt0.83□□□□□ -2.28
CLA4P48562 tT(AGU)O2tT(AGU)O2 73 nt0.83□□□□□ -2.28
CLA4P48562 PAU9YBL108C-A 129 nt0.82□□□□□ -2.28
CLA4P48562 FMP27YLR454W 7887 nt0.82□□□□□ -2.28
CLA4P48562 RPL41BYDL133C-A 78 nt0.77□□□□□ -2.29
CLA4P48562 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 76.6 ms