Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YLR286W-AYLR286W-A 135 nt-1.55□□□□□ -2.66
VPS55P47111 YBR178WYBR178W 375 nt-1.56□□□□□ -2.66
VPS55P47111 YMR315W-AYMR315W-A 108 nt-1.57□□□□□ -2.66
VPS55P47111 snR81snR81 201 nt-1.58□□□□□ -2.66
VPS55P47111 snR78snR78 87 nt-1.6□□□□□ -2.67
VPS55P47111 YGR035CYGR035C 351 nt-1.6□□□□□ -2.67
VPS55P47111 YOR329W-AYOR329W-A 210 nt-1.6□□□□□ -2.67
VPS55P47111 YOR293C-AYOR293C-A 150 nt-1.62□□□□□ -2.67
VPS55P47111 YDL159C-BYDL159C-B 177 nt-1.63□□□□□ -2.67
VPS55P47111 YBR131C-AYBR131C-A 90 nt-1.64□□□□□ -2.67
VPS55P47111 YJR157WYJR157W 363 nt-1.65□□□□□ -2.67
VPS55P47111 YBR182C-AYBR182C-A 195 nt-1.65□□□□□ -2.67
VPS55P47111 YAL068W-AYAL068W-A 255 nt-1.66□□□□□ -2.68
VPS55P47111 YDR183C-AYDR183C-A 258 nt-1.69□□□□□ -2.68
VPS55P47111 YLR222C-AYLR222C-A 231 nt-1.7□□□□□ -2.68
VPS55P47111 YOR376W-AYOR376W-A 156 nt-1.7□□□□□ -2.68
VPS55P47111 tF(GAA)QtF(GAA)Q 75 nt-1.71□□□□□ -2.68
VPS55P47111 YAL016C-BYAL016C-B 186 nt-1.73□□□□□ -2.69
VPS55P47111 YPL038W-AYPL038W-A 192 nt-1.75□□□□□ -2.69
VPS55P47111 YAL063C-AYAL063C-A 291 nt-1.77□□□□□ -2.69
VPS55P47111 YNL097C-BYNL097C-B 123 nt-1.77□□□□□ -2.69
VPS55P47111 YOR309CYOR309C 381 nt-1.77□□□□□ -2.69
VPS55P47111 YPR197CYPR197C 564 nt-1.79□□□□□ -2.7
VPS55P47111 YLR299C-AYLR299C-A 93 nt-1.82□□□□□ -2.7
VPS55P47111 YER181CYER181C 324 nt-1.83□□□□□ -2.7
VPS55P47111 tL(UAA)QtL(UAA)Q 85 nt-1.86□□□□□ -2.71
VPS55P47111 YBR196C-AYBR196C-A 150 nt-1.87□□□□□ -2.71
VPS55P47111 YNL277W-AYNL277W-A 189 nt-1.9□□□□□ -2.71
VPS55P47111 snR48snR48 113 nt-1.9□□□□□ -2.71
VPS55P47111 YDR413CYDR413C 576 nt-1.91□□□□□ -2.72
VPS55P47111 YBR126W-BYBR126W-B 144 nt-1.91□□□□□ -2.72
VPS55P47111 YEL050W-AYEL050W-A 192 nt-1.92□□□□□ -2.72
VPS55P47111 YGL188C-AYGL188C-A 141 nt-1.95□□□□□ -2.72
VPS55P47111 YPR012WYPR012W 255 nt-1.95□□□□□ -2.72
VPS55P47111 YKL118WYKL118W 312 nt-1.96□□□□□ -2.72
VPS55P47111 YOR316C-AYOR316C-A 210 nt-1.97□□□□□ -2.72
VPS55P47111 YOR102WYOR102W 351 nt-1.98□□□□□ -2.73
VPS55P47111 YOR302WYOR302W 78 nt-1.98□□□□□ -2.73
VPS55P47111 snR55snR55 98 nt-2.01□□□□□ -2.73
VPS55P47111 YLR342W-AYLR342W-A 174 nt-2.01□□□□□ -2.73
VPS55P47111 YHR180C-BYHR180C-B 105 nt-2.02□□□□□ -2.73
VPS55P47111 RPL39YJL189W 156 nt-2.05□□□□□ -2.74
VPS55P47111 YKL106C-AYKL106C-A 120 nt-2.06□□□□□ -2.74
VPS55P47111 YJL150WYJL150W 303 nt-2.11□□□□□ -2.75
VPS55P47111 YDR157WYDR157W 402 nt-2.12□□□□□ -2.75
VPS55P47111 YDL240C-AYDL240C-A 138 nt-2.13□□□□□ -2.75
VPS55P47111 snR52snR52 92 nt-2.13□□□□□ -2.75
VPS55P47111 snR6snR6 112 nt-2.14□□□□□ -2.75
VPS55P47111 YOL083C-AYOL083C-A 141 nt-2.14□□□□□ -2.75
VPS55P47111 YBR109W-AYBR109W-A 225 nt-2.14□□□□□ -2.75
VPS55P47111 GIM4YEL003W 336 nt-2.15□□□□□ -2.75
VPS55P47111 YDR118W-AYDR118W-A 117 nt-2.16□□□□□ -2.76
VPS55P47111 YOL155W-AYOL155W-A 135 nt-2.16□□□□□ -2.76
VPS55P47111 YHL015W-AYHL015W-A 84 nt-2.17□□□□□ -2.76
VPS55P47111 YDR524W-CYDR524W-C 90 nt-2.18□□□□□ -2.76
VPS55P47111 YPL152W-AYPL152W-A 99 nt-2.24□□□□□ -2.77
VPS55P47111 snR38snR38 95 nt-2.24□□□□□ -2.77
VPS55P47111 YOR335W-AYOR335W-A 81 nt-2.26□□□□□ -2.77
VPS55P47111 YNL198CYNL198C 303 nt-2.28□□□□□ -2.77
VPS55P47111 snR73snR73 106 nt-2.29□□□□□ -2.78
VPS55P47111 YBL053WYBL053W 375 nt-2.3□□□□□ -2.78
VPS55P47111 YBR296C-AYBR296C-A 120 nt-2.3□□□□□ -2.78
VPS55P47111 snR56snR56 88 nt-2.35□□□□□ -2.79
VPS55P47111 RPL41AYDL184C 78 nt-2.35□□□□□ -2.79
VPS55P47111 snR80snR80 171 nt-2.37□□□□□ -2.79
VPS55P47111 YDR543CYDR543C 300 nt-2.37□□□□□ -2.79
VPS55P47111 SOM1YEL059C-A 225 nt-2.38□□□□□ -2.79
VPS55P47111 Q0017Q0017 162 nt-2.4□□□□□ -2.79
VPS55P47111 snR65snR65 100 nt-2.42□□□□□ -2.8
VPS55P47111 VAR1Q0140 1197 nt-2.44□□□□□ -2.8
VPS55P47111 YBL071C-BYBL071C-B 99 nt-2.46□□□□□ -2.8
VPS55P47111 YOL166W-AYOL166W-A 156 nt-2.51□□□□□ -2.81
VPS55P47111 RPL41BYDL133C-A 78 nt-2.54□□□□□ -2.82
VPS55P47111 YGR151CYGR151C 336 nt-2.54□□□□□ -2.82
VPS55P47111 YCR095W-AYCR095W-A 159 nt-2.56□□□□□ -2.82
VPS55P47111 YOL164W-AYOL164W-A 183 nt-2.56□□□□□ -2.82
VPS55P47111 snR47snR47 99 nt-2.61□□□□□ -2.83
VPS55P47111 tV(UAC)QtV(UAC)Q 76 nt-2.64□□□□□ -2.83
VPS55P47111 YOR231C-AYOR231C-A 201 nt-2.65□□□□□ -2.83
VPS55P47111 Q0142Q0142 177 nt-2.66□□□□□ -2.84
VPS55P47111 YDR406W-AYDR406W-A 246 nt-2.67□□□□□ -2.84
VPS55P47111 YDR524C-AYDR524C-A 120 nt-2.68□□□□□ -2.84
VPS55P47111 YDL114W-AYDL114W-A 114 nt-2.74□□□□□ -2.85
VPS55P47111 YAL037C-AYAL037C-A 93 nt-2.76□□□□□ -2.85
VPS55P47111 tS(GCU)Q1tS(GCU)Q1 86 nt-2.78□□□□□ -2.85
VPS55P47111 snR85snR85 171 nt-2.8□□□□□ -2.86
VPS55P47111 YKL225WYKL225W 348 nt-2.81□□□□□ -2.86
VPS55P47111 SPG3YDR504C 384 nt-2.83□□□□□ -2.86
VPS55P47111 YCL001W-BYCL001W-B 255 nt-2.87□□□□□ -2.87
VPS55P47111 YBL100W-CYBL100W-C 120 nt-2.88□□□□□ -2.87
VPS55P47111 snR87snR87 109 nt-2.9□□□□□ -2.87
VPS55P47111 YHR175W-AYHR175W-A 150 nt-2.9□□□□□ -2.87
VPS55P47111 tR(ACG)Q2tR(ACG)Q2 74 nt-2.97□□□□□ -2.88
VPS55P47111 YDL159W-AYDL159W-A 132 nt-3.02□□□□□ -2.89
VPS55P47111 YGR122C-AYGR122C-A 129 nt-3.09□□□□□ -2.9
VPS55P47111 YNL337WYNL337W 255 nt-3.1□□□□□ -2.91
VPS55P47111 YKL096C-BYKL096C-B 150 nt-3.11□□□□□ -2.91
VPS55P47111 YDR034C-AYDR034C-A 177 nt-3.18□□□□□ -2.92
VPS55P47111 Q0144Q0144 330 nt-3.18□□□□□ -2.92
VPS55P47111 YMR046W-AYMR046W-A 129 nt-3.18□□□□□ -2.92
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms