Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 YPR197CYPR197C 564 nt-2.72□□□□□ -2.84
VTH1P40438 YAL066WYAL066W 309 nt-2.73□□□□□ -2.85
VTH1P40438 YMR001C-AYMR001C-A 231 nt-2.74□□□□□ -2.85
VTH1P40438 snR41snR41 95 nt-2.78□□□□□ -2.85
VTH1P40438 YAL016C-BYAL016C-B 186 nt-2.78□□□□□ -2.86
VTH1P40438 YGL041CYGL041C 204 nt-2.79□□□□□ -2.86
VTH1P40438 YOL013W-BYOL013W-B 291 nt-2.8□□□□□ -2.86
VTH1P40438 snR55snR55 98 nt-2.81□□□□□ -2.86
VTH1P40438 YLR434CYLR434C 384 nt-2.81□□□□□ -2.86
VTH1P40438 YHR180C-BYHR180C-B 105 nt-2.82□□□□□ -2.86
VTH1P40438 YLR299C-AYLR299C-A 93 nt-2.83□□□□□ -2.86
VTH1P40438 YLR120W-AYLR120W-A 102 nt-2.84□□□□□ -2.86
VTH1P40438 YOR329W-AYOR329W-A 210 nt-2.85□□□□□ -2.87
VTH1P40438 snR78snR78 87 nt-2.87□□□□□ -2.87
VTH1P40438 tW(UCA)QtW(UCA)Q 74 nt-2.88□□□□□ -2.87
VTH1P40438 YPR012WYPR012W 255 nt-2.88□□□□□ -2.87
VTH1P40438 YEL014CYEL014C 306 nt-2.88□□□□□ -2.87
VTH1P40438 YER181CYER181C 324 nt-2.89□□□□□ -2.87
VTH1P40438 snR6snR6 112 nt-2.9□□□□□ -2.87
VTH1P40438 HTL1YCR020W-B 237 nt-2.97□□□□□ -2.88
VTH1P40438 YKL106C-AYKL106C-A 120 nt-2.97□□□□□ -2.88
VTH1P40438 YLR222C-AYLR222C-A 231 nt-3.01□□□□□ -2.89
VTH1P40438 YOL038C-AYOL038C-A 96 nt-3.01□□□□□ -2.89
VTH1P40438 YJL047C-AYJL047C-A 135 nt-3.03□□□□□ -2.89
VTH1P40438 YOL155W-AYOL155W-A 135 nt-3.04□□□□□ -2.9
VTH1P40438 BIL1YOR304C-A 231 nt-3.04□□□□□ -2.9
VTH1P40438 STE18YJR086W 333 nt-3.05□□□□□ -2.9
VTH1P40438 snR73snR73 106 nt-3.09□□□□□ -2.9
VTH1P40438 snR80snR80 171 nt-3.1□□□□□ -2.91
VTH1P40438 YOR102WYOR102W 351 nt-3.11□□□□□ -2.91
VTH1P40438 YNL122CYNL122C 348 nt-3.12□□□□□ -2.91
VTH1P40438 YDR524C-AYDR524C-A 120 nt-3.13□□□□□ -2.91
VTH1P40438 YDR413CYDR413C 576 nt-3.14□□□□□ -2.91
VTH1P40438 YKL123WYKL123W 381 nt-3.15□□□□□ -2.91
VTH1P40438 YOR335W-AYOR335W-A 81 nt-3.16□□□□□ -2.92
VTH1P40438 Q0255Q0255 1419 nt-3.17□□□□□ -2.92
VTH1P40438 YBR131C-AYBR131C-A 90 nt-3.18□□□□□ -2.92
VTH1P40438 RPL41BYDL133C-A 78 nt-3.23□□□□□ -2.93
VTH1P40438 YJL150WYJL150W 303 nt-3.23□□□□□ -2.93
VTH1P40438 YBR109W-AYBR109W-A 225 nt-3.23□□□□□ -2.93
VTH1P40438 YGL188C-AYGL188C-A 141 nt-3.25□□□□□ -2.93
VTH1P40438 snR48snR48 113 nt-3.26□□□□□ -2.93
VTH1P40438 tF(GAA)QtF(GAA)Q 75 nt-3.27□□□□□ -2.93
VTH1P40438 YKL118WYKL118W 312 nt-3.29□□□□□ -2.94
VTH1P40438 YDR183C-AYDR183C-A 258 nt-3.33□□□□□ -2.94
VTH1P40438 YLR285C-AYLR285C-A 171 nt-3.36□□□□□ -2.95
VTH1P40438 YAL063C-AYAL063C-A 291 nt-3.37□□□□□ -2.95
VTH1P40438 tL(UAA)QtL(UAA)Q 85 nt-3.38□□□□□ -2.95
VTH1P40438 RPL41AYDL184C 78 nt-3.39□□□□□ -2.95
VTH1P40438 YBR296C-AYBR296C-A 120 nt-3.39□□□□□ -2.95
VTH1P40438 YGR035CYGR035C 351 nt-3.41□□□□□ -2.96
VTH1P40438 YJR162CYJR162C 351 nt-3.44□□□□□ -2.96
VTH1P40438 YNL337WYNL337W 255 nt-3.44□□□□□ -2.96
VTH1P40438 YPL038W-AYPL038W-A 192 nt-3.44□□□□□ -2.96
VTH1P40438 GIM4YEL003W 336 nt-3.45□□□□□ -2.96
VTH1P40438 snR38snR38 95 nt-3.45□□□□□ -2.96
VTH1P40438 YNL097C-BYNL097C-B 123 nt-3.46□□□□□ -2.96
VTH1P40438 snR56snR56 88 nt-3.48□□□□□ -2.97
VTH1P40438 YNL198CYNL198C 303 nt-3.55□□□□□ -2.98
VTH1P40438 YDR406W-AYDR406W-A 246 nt-3.57□□□□□ -2.98
VTH1P40438 snR87snR87 109 nt-3.59□□□□□ -2.98
VTH1P40438 YNR025CYNR025C 360 nt-3.68□□□□□ -3
VTH1P40438 snR85snR85 171 nt-3.7□□□□□ -3
VTH1P40438 tV(UAC)QtV(UAC)Q 76 nt-3.71□□□□□ -3
VTH1P40438 YHL015W-AYHL015W-A 84 nt-3.73□□□□□ -3.01
VTH1P40438 snR52snR52 92 nt-3.75□□□□□ -3.01
VTH1P40438 YOR302WYOR302W 78 nt-3.78□□□□□ -3.01
VTH1P40438 RPL39YJL189W 156 nt-3.79□□□□□ -3.02
VTH1P40438 YNL277W-AYNL277W-A 189 nt-3.8□□□□□ -3.02
VTH1P40438 YDL114W-AYDL114W-A 114 nt-3.81□□□□□ -3.02
VTH1P40438 SOM1YEL059C-A 225 nt-3.83□□□□□ -3.02
VTH1P40438 YOL164W-AYOL164W-A 183 nt-3.86□□□□□ -3.03
VTH1P40438 YBL071C-BYBL071C-B 99 nt-3.9□□□□□ -3.03
VTH1P40438 YCR095W-AYCR095W-A 159 nt-3.92□□□□□ -3.04
VTH1P40438 snR47snR47 99 nt-3.95□□□□□ -3.04
VTH1P40438 YGR151CYGR151C 336 nt-4□□□□□ -3.05
VTH1P40438 snR58snR58 96 nt-4.09□□□□□ -3.06
VTH1P40438 YKL225WYKL225W 348 nt-4.12□□□□□ -3.07
VTH1P40438 YDL240C-AYDL240C-A 138 nt-4.13□□□□□ -3.07
VTH1P40438 YDR157WYDR157W 402 nt-4.13□□□□□ -3.07
VTH1P40438 YDR118W-AYDR118W-A 117 nt-4.15□□□□□ -3.07
VTH1P40438 YKL096C-BYKL096C-B 150 nt-4.16□□□□□ -3.07
VTH1P40438 SPG3YDR504C 384 nt-4.16□□□□□ -3.08
VTH1P40438 YBL053WYBL053W 375 nt-4.18□□□□□ -3.08
VTH1P40438 tR(UCU)Q1tR(UCU)Q1 73 nt-4.2□□□□□ -3.08
VTH1P40438 YHR175W-AYHR175W-A 150 nt-4.21□□□□□ -3.08
VTH1P40438 YAL037C-AYAL037C-A 93 nt-4.21□□□□□ -3.08
VTH1P40438 YBL100W-CYBL100W-C 120 nt-4.22□□□□□ -3.09
VTH1P40438 tS(GCU)Q1tS(GCU)Q1 86 nt-4.29□□□□□ -3.1
VTH1P40438 YPL152W-AYPL152W-A 99 nt-4.3□□□□□ -3.1
VTH1P40438 YJL136W-AYJL136W-A 84 nt-4.31□□□□□ -3.1
VTH1P40438 YEL050W-AYEL050W-A 192 nt-4.39□□□□□ -3.11
VTH1P40438 YDL159W-AYDL159W-A 132 nt-4.43□□□□□ -3.12
VTH1P40438 YGR122C-AYGR122C-A 129 nt-4.46□□□□□ -3.12
VTH1P40438 snR65snR65 100 nt-4.49□□□□□ -3.13
VTH1P40438 YDR034C-AYDR034C-A 177 nt-4.52□□□□□ -3.13
VTH1P40438 YNL170WYNL170W 396 nt-4.76□□□□□ -3.17
VTH1P40438 YCL001W-BYCL001W-B 255 nt-4.76□□□□□ -3.17
VTH1P40438 YGL007C-AYGL007C-A 87 nt-4.77□□□□□ -3.17
VTH1P40438 Q0017Q0017 162 nt-4.82□□□□□ -3.18
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms