Protein–RNA interactions for Protein: P40339

RFC4, Replication factor C subunit 4, yeastyeast

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC4P40339 RPL39YJL189W 156 nt-1.2□□□□□ -2.6
RFC4P40339 YOR381W-AYOR381W-A 168 nt-1.22□□□□□ -2.6
RFC4P40339 YEL014CYEL014C 306 nt-1.23□□□□□ -2.61
RFC4P40339 YFL019CYFL019C 354 nt-1.24□□□□□ -2.61
RFC4P40339 YGR146C-AYGR146C-A 162 nt-1.24□□□□□ -2.61
RFC4P40339 YDR413CYDR413C 576 nt-1.25□□□□□ -2.61
RFC4P40339 tF(GAA)QtF(GAA)Q 75 nt-1.25□□□□□ -2.61
RFC4P40339 PMP2YEL017C-A 132 nt-1.26□□□□□ -2.61
RFC4P40339 YDR118W-AYDR118W-A 117 nt-1.27□□□□□ -2.61
RFC4P40339 YDL240C-AYDL240C-A 138 nt-1.28□□□□□ -2.61
RFC4P40339 YER181CYER181C 324 nt-1.28□□□□□ -2.61
RFC4P40339 snR39BsnR39B 96 nt-1.28□□□□□ -2.61
RFC4P40339 snR67snR67 82 nt-1.31□□□□□ -2.62
RFC4P40339 YBR131C-AYBR131C-A 90 nt-1.33□□□□□ -2.62
RFC4P40339 YKL118WYKL118W 312 nt-1.34□□□□□ -2.62
RFC4P40339 YNL277W-AYNL277W-A 189 nt-1.35□□□□□ -2.63
RFC4P40339 SKI7YOR076C 2244 nt-1.35□□□□□ -2.63
RFC4P40339 VAR1Q0140 1197 nt-1.36□□□□□ -2.63
RFC4P40339 tD(GUC)QtD(GUC)Q 75 nt-1.37□□□□□ -2.63
RFC4P40339 YOR329W-AYOR329W-A 210 nt-1.37□□□□□ -2.63
RFC4P40339 YLR286W-AYLR286W-A 135 nt-1.38□□□□□ -2.63
RFC4P40339 YPR012WYPR012W 255 nt-1.39□□□□□ -2.63
RFC4P40339 YBR178WYBR178W 375 nt-1.41□□□□□ -2.64
RFC4P40339 GIM4YEL003W 336 nt-1.42□□□□□ -2.64
RFC4P40339 snR55snR55 98 nt-1.44□□□□□ -2.64
RFC4P40339 YDL159C-BYDL159C-B 177 nt-1.46□□□□□ -2.64
RFC4P40339 YNL097C-BYNL097C-B 123 nt-1.46□□□□□ -2.64
RFC4P40339 YML054C-AYML054C-A 159 nt-1.49□□□□□ -2.65
RFC4P40339 YNL205CYNL205C 423 nt-1.53□□□□□ -2.65
RFC4P40339 CDC65tQ(CUG)M 72 nt-1.55□□□□□ -2.66
RFC4P40339 tY(GUA)QtY(GUA)Q 84 nt-1.57□□□□□ -2.66
RFC4P40339 YGR240C-AYGR240C-A 201 nt-1.58□□□□□ -2.66
RFC4P40339 snR48snR48 113 nt-1.59□□□□□ -2.66
RFC4P40339 snR77snR77 88 nt-1.6□□□□□ -2.67
RFC4P40339 YOL155W-AYOL155W-A 135 nt-1.6□□□□□ -2.67
RFC4P40339 YLR299C-AYLR299C-A 93 nt-1.64□□□□□ -2.67
RFC4P40339 YOR102WYOR102W 351 nt-1.65□□□□□ -2.67
RFC4P40339 YGL188C-AYGL188C-A 141 nt-1.66□□□□□ -2.68
RFC4P40339 YOR302WYOR302W 78 nt-1.67□□□□□ -2.68
RFC4P40339 tL(UAA)QtL(UAA)Q 85 nt-1.68□□□□□ -2.68
RFC4P40339 snR81snR81 201 nt-1.69□□□□□ -2.68
RFC4P40339 YMR315W-AYMR315W-A 108 nt-1.69□□□□□ -2.68
RFC4P40339 snR65snR65 100 nt-1.7□□□□□ -2.68
RFC4P40339 YPL152W-AYPL152W-A 99 nt-1.7□□□□□ -2.68
RFC4P40339 YBR196C-AYBR196C-A 150 nt-1.71□□□□□ -2.68
RFC4P40339 snR52snR52 92 nt-1.73□□□□□ -2.69
RFC4P40339 Q0144Q0144 330 nt-1.75□□□□□ -2.69
RFC4P40339 YOR376W-AYOR376W-A 156 nt-1.77□□□□□ -2.69
RFC4P40339 YHL015W-AYHL015W-A 84 nt-1.8□□□□□ -2.7
RFC4P40339 YLR342W-AYLR342W-A 174 nt-1.8□□□□□ -2.7
RFC4P40339 YHR180C-BYHR180C-B 105 nt-1.87□□□□□ -2.71
RFC4P40339 YHR175W-AYHR175W-A 150 nt-1.97□□□□□ -2.72
RFC4P40339 YJL150WYJL150W 303 nt-1.98□□□□□ -2.73
RFC4P40339 YKL106C-AYKL106C-A 120 nt-1.98□□□□□ -2.73
RFC4P40339 YOR316C-AYOR316C-A 210 nt-1.98□□□□□ -2.73
RFC4P40339 YNL198CYNL198C 303 nt-2.01□□□□□ -2.73
RFC4P40339 YOR309CYOR309C 381 nt-2.01□□□□□ -2.73
RFC4P40339 snR80snR80 171 nt-2.03□□□□□ -2.73
RFC4P40339 YOR231C-AYOR231C-A 201 nt-2.04□□□□□ -2.74
RFC4P40339 SOM1YEL059C-A 225 nt-2.08□□□□□ -2.74
RFC4P40339 tR(ACG)Q2tR(ACG)Q2 74 nt-2.09□□□□□ -2.74
RFC4P40339 snR56snR56 88 nt-2.14□□□□□ -2.75
RFC4P40339 YBL053WYBL053W 375 nt-2.15□□□□□ -2.75
RFC4P40339 YBR109W-AYBR109W-A 225 nt-2.15□□□□□ -2.75
RFC4P40339 YDR406W-AYDR406W-A 246 nt-2.17□□□□□ -2.76
RFC4P40339 RPL41AYDL184C 78 nt-2.18□□□□□ -2.76
RFC4P40339 YBR296C-AYBR296C-A 120 nt-2.18□□□□□ -2.76
RFC4P40339 YBR126W-BYBR126W-B 144 nt-2.24□□□□□ -2.77
RFC4P40339 YCR095W-AYCR095W-A 159 nt-2.25□□□□□ -2.77
RFC4P40339 YOL083C-AYOL083C-A 141 nt-2.3□□□□□ -2.78
RFC4P40339 snR38snR38 95 nt-2.3□□□□□ -2.78
RFC4P40339 YDR524W-CYDR524W-C 90 nt-2.32□□□□□ -2.78
RFC4P40339 YGR151CYGR151C 336 nt-2.34□□□□□ -2.78
RFC4P40339 YBL071C-BYBL071C-B 99 nt-2.37□□□□□ -2.79
RFC4P40339 snR6snR6 112 nt-2.38□□□□□ -2.79
RFC4P40339 YOL164W-AYOL164W-A 183 nt-2.42□□□□□ -2.8
RFC4P40339 YOR335W-AYOR335W-A 81 nt-2.45□□□□□ -2.8
RFC4P40339 snR47snR47 99 nt-2.46□□□□□ -2.8
RFC4P40339 snR73snR73 106 nt-2.51□□□□□ -2.81
RFC4P40339 RPL41BYDL133C-A 78 nt-2.52□□□□□ -2.81
RFC4P40339 YAL037C-AYAL037C-A 93 nt-2.57□□□□□ -2.82
RFC4P40339 YMR046W-AYMR046W-A 129 nt-2.57□□□□□ -2.82
RFC4P40339 YBL100W-CYBL100W-C 120 nt-2.58□□□□□ -2.82
RFC4P40339 YDR543CYDR543C 300 nt-2.6□□□□□ -2.83
RFC4P40339 YOL166W-AYOL166W-A 156 nt-2.6□□□□□ -2.83
RFC4P40339 YCL001W-BYCL001W-B 255 nt-2.61□□□□□ -2.83
RFC4P40339 YDL114W-AYDL114W-A 114 nt-2.71□□□□□ -2.84
RFC4P40339 SPG3YDR504C 384 nt-2.71□□□□□ -2.84
RFC4P40339 YKL225WYKL225W 348 nt-2.72□□□□□ -2.84
RFC4P40339 tS(GCU)Q1tS(GCU)Q1 86 nt-2.73□□□□□ -2.85
RFC4P40339 tV(UAC)QtV(UAC)Q 76 nt-2.76□□□□□ -2.85
RFC4P40339 snR85snR85 171 nt-2.79□□□□□ -2.86
RFC4P40339 YNL337WYNL337W 255 nt-2.86□□□□□ -2.87
RFC4P40339 Q0142Q0142 177 nt-2.88□□□□□ -2.87
RFC4P40339 YLR466C-BYLR466C-B 117 nt-2.88□□□□□ -2.87
RFC4P40339 tM(CAU)Q1tM(CAU)Q1 76 nt-2.9□□□□□ -2.87
RFC4P40339 YDR524C-AYDR524C-A 120 nt-2.91□□□□□ -2.88
RFC4P40339 YNL338WYNL338W 159 nt-2.92□□□□□ -2.88
RFC4P40339 YDR034C-AYDR034C-A 177 nt-3.05□□□□□ -2.9
RFC4P40339 YGR122C-AYGR122C-A 129 nt-3.05□□□□□ -2.9
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms