Protein–RNA interactions for Protein: P38873

KOG1, Target of rapamycin complex 1 subunit KOG1, yeastyeast

Predictions only

Length 1,557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KOG1P38873 YOR316C-AYOR316C-A 210 nt-3.19□□□□□ -2.92
KOG1P38873 YPR197CYPR197C 564 nt-3.2□□□□□ -2.92
KOG1P38873 YLR406C-AYLR406C-A 150 nt-3.22□□□□□ -2.93
KOG1P38873 YLR434CYLR434C 384 nt-3.26□□□□□ -2.93
KOG1P38873 YGL041CYGL041C 204 nt-3.28□□□□□ -2.93
KOG1P38873 YAL016C-BYAL016C-B 186 nt-3.28□□□□□ -2.93
KOG1P38873 snR41snR41 95 nt-3.29□□□□□ -2.94
KOG1P38873 YOL013W-BYOL013W-B 291 nt-3.32□□□□□ -2.94
KOG1P38873 YLR120W-AYLR120W-A 102 nt-3.33□□□□□ -2.94
KOG1P38873 YHR180C-BYHR180C-B 105 nt-3.34□□□□□ -2.94
KOG1P38873 YEL014CYEL014C 306 nt-3.34□□□□□ -2.94
KOG1P38873 tW(UCA)QtW(UCA)Q 74 nt-3.34□□□□□ -2.94
KOG1P38873 YOR329W-AYOR329W-A 210 nt-3.34□□□□□ -2.94
KOG1P38873 YLR299C-AYLR299C-A 93 nt-3.35□□□□□ -2.95
KOG1P38873 snR55snR55 98 nt-3.36□□□□□ -2.95
KOG1P38873 snR78snR78 87 nt-3.38□□□□□ -2.95
KOG1P38873 YPR012WYPR012W 255 nt-3.42□□□□□ -2.96
KOG1P38873 YOL038C-AYOL038C-A 96 nt-3.43□□□□□ -2.96
KOG1P38873 snR6snR6 112 nt-3.46□□□□□ -2.96
KOG1P38873 YER181CYER181C 324 nt-3.46□□□□□ -2.96
KOG1P38873 YJL047C-AYJL047C-A 135 nt-3.46□□□□□ -2.96
KOG1P38873 HTL1YCR020W-B 237 nt-3.48□□□□□ -2.97
KOG1P38873 STE18YJR086W 333 nt-3.51□□□□□ -2.97
KOG1P38873 YKL106C-AYKL106C-A 120 nt-3.54□□□□□ -2.98
KOG1P38873 YLR222C-AYLR222C-A 231 nt-3.54□□□□□ -2.98
KOG1P38873 BIL1YOR304C-A 231 nt-3.57□□□□□ -2.98
KOG1P38873 YNL122CYNL122C 348 nt-3.62□□□□□ -2.99
KOG1P38873 YKL123WYKL123W 381 nt-3.63□□□□□ -2.99
KOG1P38873 YOL155W-AYOL155W-A 135 nt-3.64□□□□□ -2.99
KOG1P38873 YJR162CYJR162C 351 nt-3.66□□□□□ -3
KOG1P38873 YNL337WYNL337W 255 nt-3.66□□□□□ -3
KOG1P38873 Q0255Q0255 1419 nt-3.67□□□□□ -3
KOG1P38873 snR80snR80 171 nt-3.68□□□□□ -3
KOG1P38873 YOR102WYOR102W 351 nt-3.68□□□□□ -3
KOG1P38873 YBR131C-AYBR131C-A 90 nt-3.7□□□□□ -3
KOG1P38873 snR73snR73 106 nt-3.71□□□□□ -3
KOG1P38873 YDR413CYDR413C 576 nt-3.73□□□□□ -3.01
KOG1P38873 YDR524C-AYDR524C-A 120 nt-3.76□□□□□ -3.01
KOG1P38873 YOR335W-AYOR335W-A 81 nt-3.78□□□□□ -3.01
KOG1P38873 tF(GAA)QtF(GAA)Q 75 nt-3.82□□□□□ -3.02
KOG1P38873 YGL188C-AYGL188C-A 141 nt-3.84□□□□□ -3.02
KOG1P38873 YLR285C-AYLR285C-A 171 nt-3.84□□□□□ -3.02
KOG1P38873 YBR109W-AYBR109W-A 225 nt-3.84□□□□□ -3.02
KOG1P38873 YKL118WYKL118W 312 nt-3.86□□□□□ -3.03
KOG1P38873 snR48snR48 113 nt-3.87□□□□□ -3.03
KOG1P38873 YJL150WYJL150W 303 nt-3.88□□□□□ -3.03
KOG1P38873 RPL41BYDL133C-A 78 nt-3.89□□□□□ -3.03
KOG1P38873 YDR183C-AYDR183C-A 258 nt-3.89□□□□□ -3.03
KOG1P38873 YAL063C-AYAL063C-A 291 nt-3.97□□□□□ -3.04
KOG1P38873 tL(UAA)QtL(UAA)Q 85 nt-3.97□□□□□ -3.05
KOG1P38873 YGR035CYGR035C 351 nt-3.99□□□□□ -3.05
KOG1P38873 RPL41AYDL184C 78 nt-4.01□□□□□ -3.05
KOG1P38873 YBR296C-AYBR296C-A 120 nt-4.03□□□□□ -3.05
KOG1P38873 YPL038W-AYPL038W-A 192 nt-4.04□□□□□ -3.06
KOG1P38873 YNL097C-BYNL097C-B 123 nt-4.06□□□□□ -3.06
KOG1P38873 GIM4YEL003W 336 nt-4.06□□□□□ -3.06
KOG1P38873 snR38snR38 95 nt-4.06□□□□□ -3.06
KOG1P38873 snR56snR56 88 nt-4.14□□□□□ -3.07
KOG1P38873 YDR406W-AYDR406W-A 246 nt-4.25□□□□□ -3.09
KOG1P38873 YNL198CYNL198C 303 nt-4.25□□□□□ -3.09
KOG1P38873 YNR025CYNR025C 360 nt-4.26□□□□□ -3.09
KOG1P38873 snR87snR87 109 nt-4.31□□□□□ -3.1
KOG1P38873 tV(UAC)QtV(UAC)Q 76 nt-4.4□□□□□ -3.11
KOG1P38873 YOR302WYOR302W 78 nt-4.4□□□□□ -3.11
KOG1P38873 snR52snR52 92 nt-4.4□□□□□ -3.11
KOG1P38873 snR85snR85 171 nt-4.41□□□□□ -3.12
KOG1P38873 YHL015W-AYHL015W-A 84 nt-4.42□□□□□ -3.12
KOG1P38873 YNL277W-AYNL277W-A 189 nt-4.45□□□□□ -3.12
KOG1P38873 RPL39YJL189W 156 nt-4.47□□□□□ -3.12
KOG1P38873 SOM1YEL059C-A 225 nt-4.52□□□□□ -3.13
KOG1P38873 YDL114W-AYDL114W-A 114 nt-4.53□□□□□ -3.13
KOG1P38873 YOL164W-AYOL164W-A 183 nt-4.55□□□□□ -3.14
KOG1P38873 YBL071C-BYBL071C-B 99 nt-4.57□□□□□ -3.14
KOG1P38873 YCR095W-AYCR095W-A 159 nt-4.63□□□□□ -3.15
KOG1P38873 snR47snR47 99 nt-4.64□□□□□ -3.15
KOG1P38873 YGR151CYGR151C 336 nt-4.7□□□□□ -3.16
KOG1P38873 tR(UCU)Q1tR(UCU)Q1 73 nt-4.8□□□□□ -3.18
KOG1P38873 YDL240C-AYDL240C-A 138 nt-4.82□□□□□ -3.18
KOG1P38873 YKL225WYKL225W 348 nt-4.88□□□□□ -3.19
KOG1P38873 snR58snR58 96 nt-4.9□□□□□ -3.19
KOG1P38873 SPG3YDR504C 384 nt-4.93□□□□□ -3.2
KOG1P38873 YDR157WYDR157W 402 nt-4.94□□□□□ -3.2
KOG1P38873 YKL096C-BYKL096C-B 150 nt-4.95□□□□□ -3.2
KOG1P38873 YBL053WYBL053W 375 nt-4.95□□□□□ -3.2
KOG1P38873 YDR118W-AYDR118W-A 117 nt-4.98□□□□□ -3.21
KOG1P38873 YHR175W-AYHR175W-A 150 nt-4.99□□□□□ -3.21
KOG1P38873 YAL037C-AYAL037C-A 93 nt-5□□□□□ -3.21
KOG1P38873 tS(GCU)Q1tS(GCU)Q1 86 nt-5.04□□□□□ -3.22
KOG1P38873 YBL100W-CYBL100W-C 120 nt-5.04□□□□□ -3.22
KOG1P38873 YPL152W-AYPL152W-A 99 nt-5.05□□□□□ -3.22
KOG1P38873 YEL050W-AYEL050W-A 192 nt-5.12□□□□□ -3.23
KOG1P38873 YJL136W-AYJL136W-A 84 nt-5.17□□□□□ -3.24
KOG1P38873 YDL159W-AYDL159W-A 132 nt-5.21□□□□□ -3.24
KOG1P38873 snR65snR65 100 nt-5.29□□□□□ -3.26
KOG1P38873 YGR122C-AYGR122C-A 129 nt-5.29□□□□□ -3.26
KOG1P38873 YDR034C-AYDR034C-A 177 nt-5.38□□□□□ -3.27
KOG1P38873 YCL001W-BYCL001W-B 255 nt-5.62□□□□□ -3.31
KOG1P38873 YGL007C-AYGL007C-A 87 nt-5.67□□□□□ -3.32
KOG1P38873 Q0017Q0017 162 nt-5.69□□□□□ -3.32
KOG1P38873 YNL170WYNL170W 396 nt-5.71□□□□□ -3.32
Retrieved 100 of 7,029 protein–RNA pairs in 58.2 ms