Protein–RNA interactions for Protein: P22516

CHL1, ATP-dependent DNA helicase CHL1, yeastyeast

Predicted RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL1P22516 PEP1YBL017C 4740 nt1.95□□□□□ -2.1
CHL1P22516 YHR214C-BYHR214C-B 5382 nt1.94□□□□□ -2.1
CHL1P22516 SKI3YPR189W 4299 nt1.93□□□□□ -2.1
CHL1P22516 TRM732YMR259C 4263 nt1.9□□□□□ -2.1
CHL1P22516 TMA7YLR262C-A 195 nt1.9□□□□□ -2.11
CHL1P22516 SWI4YER111C 3282 nt1.9□□□□□ -2.11
CHL1P22516 PMD1YER132C 5262 nt1.89□□□□□ -2.11
CHL1P22516 SEC31YDL195W 3822 nt1.88□□□□□ -2.11
CHL1P22516 NEO1YIL048W 3456 nt1.88□□□□□ -2.11
CHL1P22516 MON2YNL297C 4911 nt1.88□□□□□ -2.11
CHL1P22516 LAA1YJL207C 6045 nt1.87□□□□□ -2.11
CHL1P22516 snR77snR77 88 nt1.87□□□□□ -2.11
CHL1P22516 SOV1YMR066W 2697 nt1.84□□□□□ -2.12
CHL1P22516 NUP145YGL092W 3954 nt1.83□□□□□ -2.12
CHL1P22516 YMR272W-BYMR272W-B 108 nt1.81□□□□□ -2.12
CHL1P22516 NUP188YML103C 4968 nt1.8□□□□□ -2.12
CHL1P22516 YOR093CYOR093C 4947 nt1.8□□□□□ -2.12
CHL1P22516 CDC39YCR093W 6327 nt1.79□□□□□ -2.12
CHL1P22516 YNL284C-BYNL284C-B 5268 nt1.79□□□□□ -2.12
CHL1P22516 DNF3YMR162C 4971 nt1.78□□□□□ -2.13
CHL1P22516 YMR247W-AYMR247W-A 144 nt1.76□□□□□ -2.13
CHL1P22516 VAM6YDL077C 3150 nt1.74□□□□□ -2.13
CHL1P22516 YGR130CYGR130C 2451 nt1.73□□□□□ -2.13
CHL1P22516 YOR316C-AYOR316C-A 210 nt1.73□□□□□ -2.13
CHL1P22516 MLP2YIL149C 5040 nt1.72□□□□□ -2.13
CHL1P22516 CFT1YDR301W 4074 nt1.71□□□□□ -2.13
CHL1P22516 tT(UGU)HtT(UGU)H 72 nt1.7□□□□□ -2.14
CHL1P22516 FIG2YCR089W 4830 nt1.7□□□□□ -2.14
CHL1P22516 YPR117WYPR117W 7470 nt1.69□□□□□ -2.14
CHL1P22516 BST1YFL025C 3090 nt1.68□□□□□ -2.14
CHL1P22516 VPS15YBR097W 4365 nt1.64□□□□□ -2.15
CHL1P22516 SBH2YER019C-A 267 nt1.64□□□□□ -2.15
CHL1P22516 MEC1YBR136W 7107 nt1.64□□□□□ -2.15
CHL1P22516 SSK2YNR031C 4740 nt1.62□□□□□ -2.15
CHL1P22516 SPT7YBR081C 3999 nt1.61□□□□□ -2.15
CHL1P22516 YOR192C-BYOR192C-B 5313 nt1.6□□□□□ -2.15
CHL1P22516 BRR2YER172C 6492 nt1.58□□□□□ -2.16
CHL1P22516 BUD3YCL014W 4911 nt1.54□□□□□ -2.16
CHL1P22516 tC(GCA)QtC(GCA)Q 76 nt1.51□□□□□ -2.17
CHL1P22516 IRA1YBR140C 9279 nt1.44□□□□□ -2.18
CHL1P22516 RKR1YMR247C 4689 nt1.43□□□□□ -2.18
CHL1P22516 tQ(UUG)E2tQ(UUG)E2 72 nt1.4□□□□□ -2.19
CHL1P22516 IML1YJR138W 4755 nt1.39□□□□□ -2.19
CHL1P22516 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
CHL1P22516 LTE1YAL024C 4308 nt1.35□□□□□ -2.19
CHL1P22516 THO2YNL139C 4794 nt1.34□□□□□ -2.19
CHL1P22516 tH(GUG)E1tH(GUG)E1 72 nt1.34□□□□□ -2.19
CHL1P22516 tH(GUG)E2tH(GUG)E2 72 nt1.34□□□□□ -2.19
CHL1P22516 tH(GUG)G1tH(GUG)G1 72 nt1.34□□□□□ -2.19
CHL1P22516 tH(GUG)G2tH(GUG)G2 72 nt1.34□□□□□ -2.19
CHL1P22516 tH(GUG)HtH(GUG)H 72 nt1.34□□□□□ -2.19
CHL1P22516 tH(GUG)KtH(GUG)K 72 nt1.34□□□□□ -2.19
CHL1P22516 tH(GUG)MtH(GUG)M 72 nt1.34□□□□□ -2.19
CHL1P22516 RPL41BYDL133C-A 78 nt1.33□□□□□ -2.2
CHL1P22516 YML100W-AYML100W-A 174 nt1.33□□□□□ -2.2
CHL1P22516 YBL100W-BYBL100W-B 5313 nt1.33□□□□□ -2.2
CHL1P22516 YOL014WYOL014W 375 nt1.29□□□□□ -2.2
CHL1P22516 tV(UAC)BtV(UAC)B 74 nt1.27□□□□□ -2.21
CHL1P22516 tV(UAC)DtV(UAC)D 74 nt1.27□□□□□ -2.21
CHL1P22516 HKR1YDR420W 5409 nt1.26□□□□□ -2.21
CHL1P22516 PAU24YBR301W 363 nt1.26□□□□□ -2.21
CHL1P22516 YKL145W-AYKL145W-A 93 nt1.24□□□□□ -2.21
CHL1P22516 YOR335W-AYOR335W-A 81 nt1.22□□□□□ -2.21
CHL1P22516 ESP1YGR098C 4893 nt1.18□□□□□ -2.22
CHL1P22516 snR6snR6 112 nt1.11□□□□□ -2.23
CHL1P22516 YJR029WYJR029W 5268 nt1.09□□□□□ -2.23
CHL1P22516 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.23
CHL1P22516 SCC2YDR180W 4482 nt1.09□□□□□ -2.23
CHL1P22516 snR58snR58 96 nt1.09□□□□□ -2.23
CHL1P22516 YJL113WYJL113W 4647 nt1.03□□□□□ -2.25
CHL1P22516 FMP27YLR454W 7887 nt1.01□□□□□ -2.25
CHL1P22516 PAU9YBL108C-A 129 nt1□□□□□ -2.25
CHL1P22516 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
CHL1P22516 UTP20YBL004W 7482 nt0.98□□□□□ -2.25
CHL1P22516 YOR186C-AYOR186C-A 210 nt0.97□□□□□ -2.25
CHL1P22516 BEM2YER155C 6504 nt0.97□□□□□ -2.25
CHL1P22516 snR73snR73 106 nt0.95□□□□□ -2.26
CHL1P22516 MLP1YKR095W 5628 nt0.93□□□□□ -2.26
CHL1P22516 tF(GAA)BtF(GAA)B 73 nt0.92□□□□□ -2.26
CHL1P22516 tF(GAA)FtF(GAA)F 73 nt0.92□□□□□ -2.26
CHL1P22516 tF(GAA)GtF(GAA)G 73 nt0.92□□□□□ -2.26
CHL1P22516 tF(GAA)H1tF(GAA)H1 73 nt0.92□□□□□ -2.26
CHL1P22516 tF(GAA)H2tF(GAA)H2 73 nt0.92□□□□□ -2.26
CHL1P22516 tF(GAA)MtF(GAA)M 73 nt0.92□□□□□ -2.26
CHL1P22516 tF(GAA)P1tF(GAA)P1 73 nt0.92□□□□□ -2.26
CHL1P22516 tF(GAA)P2tF(GAA)P2 73 nt0.92□□□□□ -2.26
CHL1P22516 IQG1YPL242C 4488 nt0.92□□□□□ -2.26
CHL1P22516 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
CHL1P22516 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
CHL1P22516 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
CHL1P22516 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
CHL1P22516 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
CHL1P22516 YMR272W-AYMR272W-A 114 nt0.85□□□□□ -2.27
CHL1P22516 snR161snR161 161 nt0.8□□□□□ -2.28
CHL1P22516 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
CHL1P22516 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
CHL1P22516 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
CHL1P22516 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
CHL1P22516 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
CHL1P22516 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 102.3 ms