Protein–RNA interactions for Protein: P22149

AFT1, Iron-regulated transcriptional activator AFT1, yeastyeast

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AFT1P22149 BRR2YER172C 6492 nt1.8□□□□□ -2.12
AFT1P22149 SWI4YER111C 3282 nt1.79□□□□□ -2.12
AFT1P22149 TRM732YMR259C 4263 nt1.77□□□□□ -2.13
AFT1P22149 FYV8YGR196C 2454 nt1.77□□□□□ -2.13
AFT1P22149 YMR247W-AYMR247W-A 144 nt1.77□□□□□ -2.13
AFT1P22149 YOR376W-AYOR376W-A 156 nt1.77□□□□□ -2.13
AFT1P22149 tT(UGU)HtT(UGU)H 72 nt1.76□□□□□ -2.13
AFT1P22149 YLL006W-AYLL006W-A 177 nt1.74□□□□□ -2.13
AFT1P22149 NUP145YGL092W 3954 nt1.74□□□□□ -2.13
AFT1P22149 NUP188YML103C 4968 nt1.72□□□□□ -2.13
AFT1P22149 YER090C-AYER090C-A 90 nt1.7□□□□□ -2.14
AFT1P22149 VPS15YBR097W 4365 nt1.69□□□□□ -2.14
AFT1P22149 MYO1YHR023W 5787 nt1.68□□□□□ -2.14
AFT1P22149 YDL114W-AYDL114W-A 114 nt1.68□□□□□ -2.14
AFT1P22149 YGR130CYGR130C 2451 nt1.68□□□□□ -2.14
AFT1P22149 YNL054W-BYNL054W-B 5250 nt1.68□□□□□ -2.14
AFT1P22149 CCH1YGR217W 6120 nt1.66□□□□□ -2.14
AFT1P22149 CDC39YCR093W 6327 nt1.66□□□□□ -2.14
AFT1P22149 SSK2YNR031C 4740 nt1.65□□□□□ -2.15
AFT1P22149 LAA1YJL207C 6045 nt1.65□□□□□ -2.15
AFT1P22149 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
AFT1P22149 IRA1YBR140C 9279 nt1.61□□□□□ -2.15
AFT1P22149 IML1YJR138W 4755 nt1.6□□□□□ -2.15
AFT1P22149 tV(UAC)QtV(UAC)Q 76 nt1.6□□□□□ -2.15
AFT1P22149 CLU1YMR012W 3834 nt1.59□□□□□ -2.15
AFT1P22149 snR40snR40 97 nt1.58□□□□□ -2.16
AFT1P22149 BST1YFL025C 3090 nt1.58□□□□□ -2.16
AFT1P22149 snR67snR67 82 nt1.57□□□□□ -2.16
AFT1P22149 YKL106C-AYKL106C-A 120 nt1.53□□□□□ -2.16
AFT1P22149 tH(GUG)E1tH(GUG)E1 72 nt1.49□□□□□ -2.17
AFT1P22149 tH(GUG)E2tH(GUG)E2 72 nt1.49□□□□□ -2.17
AFT1P22149 tH(GUG)G1tH(GUG)G1 72 nt1.49□□□□□ -2.17
AFT1P22149 tH(GUG)G2tH(GUG)G2 72 nt1.49□□□□□ -2.17
AFT1P22149 tH(GUG)HtH(GUG)H 72 nt1.49□□□□□ -2.17
AFT1P22149 tH(GUG)KtH(GUG)K 72 nt1.49□□□□□ -2.17
AFT1P22149 tH(GUG)MtH(GUG)M 72 nt1.49□□□□□ -2.17
AFT1P22149 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
AFT1P22149 SPT7YBR081C 3999 nt1.47□□□□□ -2.17
AFT1P22149 YMR160WYMR160W 2451 nt1.45□□□□□ -2.18
AFT1P22149 YNL284C-BYNL284C-B 5268 nt1.45□□□□□ -2.18
AFT1P22149 tV(UAC)BtV(UAC)B 74 nt1.44□□□□□ -2.18
AFT1P22149 tV(UAC)DtV(UAC)D 74 nt1.44□□□□□ -2.18
AFT1P22149 VAM6YDL077C 3150 nt1.41□□□□□ -2.18
AFT1P22149 YOR192C-BYOR192C-B 5313 nt1.41□□□□□ -2.18
AFT1P22149 BUD3YCL014W 4911 nt1.39□□□□□ -2.19
AFT1P22149 tQ(UUG)E2tQ(UUG)E2 72 nt1.35□□□□□ -2.19
AFT1P22149 YPR117WYPR117W 7470 nt1.34□□□□□ -2.2
AFT1P22149 RKR1YMR247C 4689 nt1.33□□□□□ -2.2
AFT1P22149 MLP2YIL149C 5040 nt1.25□□□□□ -2.21
AFT1P22149 PAU24YBR301W 363 nt1.24□□□□□ -2.21
AFT1P22149 UTP20YBL004W 7482 nt1.22□□□□□ -2.21
AFT1P22149 snR77snR77 88 nt1.21□□□□□ -2.22
AFT1P22149 LTE1YAL024C 4308 nt1.17□□□□□ -2.22
AFT1P22149 YOR316C-AYOR316C-A 210 nt1.15□□□□□ -2.23
AFT1P22149 YBL100W-BYBL100W-B 5313 nt1.11□□□□□ -2.23
AFT1P22149 DOP1YDR141C 5097 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)BtF(GAA)B 73 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)FtF(GAA)F 73 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)GtF(GAA)G 73 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)H1tF(GAA)H1 73 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)H2tF(GAA)H2 73 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)MtF(GAA)M 73 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)P1tF(GAA)P1 73 nt1.11□□□□□ -2.23
AFT1P22149 tF(GAA)P2tF(GAA)P2 73 nt1.11□□□□□ -2.23
AFT1P22149 SBH2YER019C-A 267 nt1.07□□□□□ -2.24
AFT1P22149 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
AFT1P22149 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
AFT1P22149 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
AFT1P22149 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
AFT1P22149 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
AFT1P22149 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
AFT1P22149 YJR029WYJR029W 5268 nt1.03□□□□□ -2.24
AFT1P22149 YPR137C-BYPR137C-B 5268 nt1.03□□□□□ -2.24
AFT1P22149 SOV1YMR066W 2697 nt1.03□□□□□ -2.24
AFT1P22149 YML100W-AYML100W-A 174 nt1.01□□□□□ -2.25
AFT1P22149 THO2YNL139C 4794 nt1□□□□□ -2.25
AFT1P22149 BEM2YER155C 6504 nt0.97□□□□□ -2.25
AFT1P22149 YOL014WYOL014W 375 nt0.9□□□□□ -2.27
AFT1P22149 YOR186C-AYOR186C-A 210 nt0.86□□□□□ -2.27
AFT1P22149 MLP1YKR095W 5628 nt0.86□□□□□ -2.27
AFT1P22149 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
AFT1P22149 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
AFT1P22149 YKL145W-AYKL145W-A 93 nt0.8□□□□□ -2.28
AFT1P22149 ESP1YGR098C 4893 nt0.79□□□□□ -2.28
AFT1P22149 IQG1YPL242C 4488 nt0.77□□□□□ -2.29
AFT1P22149 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
AFT1P22149 PAU9YBL108C-A 129 nt0.74□□□□□ -2.29
AFT1P22149 FMP27YLR454W 7887 nt0.66□□□□□ -2.3
AFT1P22149 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
AFT1P22149 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
AFT1P22149 snR128snR128 126 nt0.59□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 134.5 ms