Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 YLR120W-AYLR120W-A 102 nt-3.01□□□□□ -2.89
XRN1P22147 YBR178WYBR178W 375 nt-3.02□□□□□ -2.89
XRN1P22147 Q0255Q0255 1419 nt-3.02□□□□□ -2.89
XRN1P22147 YAL016C-BYAL016C-B 186 nt-3.03□□□□□ -2.9
XRN1P22147 YJR162CYJR162C 351 nt-3.04□□□□□ -2.9
XRN1P22147 YLR406C-AYLR406C-A 150 nt-3.04□□□□□ -2.9
XRN1P22147 YNL337WYNL337W 255 nt-3.04□□□□□ -2.9
XRN1P22147 YOR316C-AYOR316C-A 210 nt-3.05□□□□□ -2.9
XRN1P22147 snR41snR41 95 nt-3.05□□□□□ -2.9
XRN1P22147 YGL041CYGL041C 204 nt-3.06□□□□□ -2.9
XRN1P22147 tW(UCA)QtW(UCA)Q 74 nt-3.06□□□□□ -2.9
XRN1P22147 HTL1YCR020W-B 237 nt-3.08□□□□□ -2.9
XRN1P22147 YKL123WYKL123W 381 nt-3.09□□□□□ -2.9
XRN1P22147 YOL083C-AYOL083C-A 141 nt-3.09□□□□□ -2.9
XRN1P22147 YOL013W-BYOL013W-B 291 nt-3.12□□□□□ -2.91
XRN1P22147 YDR524W-CYDR524W-C 90 nt-3.13□□□□□ -2.91
XRN1P22147 YNL122CYNL122C 348 nt-3.13□□□□□ -2.91
XRN1P22147 BIL1YOR304C-A 231 nt-3.14□□□□□ -2.91
XRN1P22147 YOR329W-AYOR329W-A 210 nt-3.15□□□□□ -2.91
XRN1P22147 YPR197CYPR197C 564 nt-3.15□□□□□ -2.91
XRN1P22147 snR78snR78 87 nt-3.18□□□□□ -2.92
XRN1P22147 YLR299C-AYLR299C-A 93 nt-3.18□□□□□ -2.92
XRN1P22147 snR55snR55 98 nt-3.19□□□□□ -2.92
XRN1P22147 YEL014CYEL014C 306 nt-3.19□□□□□ -2.92
XRN1P22147 YHR180C-BYHR180C-B 105 nt-3.19□□□□□ -2.92
XRN1P22147 YLR285C-AYLR285C-A 171 nt-3.26□□□□□ -2.93
XRN1P22147 ATP19YOL077W-A 207 nt-3.31□□□□□ -2.94
XRN1P22147 YPR012WYPR012W 255 nt-3.36□□□□□ -2.95
XRN1P22147 YLR222C-AYLR222C-A 231 nt-3.38□□□□□ -2.95
XRN1P22147 YOR102WYOR102W 351 nt-3.4□□□□□ -2.95
XRN1P22147 YAL063C-AYAL063C-A 291 nt-3.41□□□□□ -2.96
XRN1P22147 YDR183C-AYDR183C-A 258 nt-3.42□□□□□ -2.96
XRN1P22147 YKL106C-AYKL106C-A 120 nt-3.42□□□□□ -2.96
XRN1P22147 snR6snR6 112 nt-3.44□□□□□ -2.96
XRN1P22147 YER181CYER181C 324 nt-3.44□□□□□ -2.96
XRN1P22147 tF(GAA)QtF(GAA)Q 75 nt-3.48□□□□□ -2.97
XRN1P22147 YBR131C-AYBR131C-A 90 nt-3.49□□□□□ -2.97
XRN1P22147 YDR413CYDR413C 576 nt-3.54□□□□□ -2.98
XRN1P22147 YGR035CYGR035C 351 nt-3.54□□□□□ -2.98
XRN1P22147 snR48snR48 113 nt-3.54□□□□□ -2.98
XRN1P22147 YGL188C-AYGL188C-A 141 nt-3.6□□□□□ -2.98
XRN1P22147 YKL118WYKL118W 312 nt-3.6□□□□□ -2.98
XRN1P22147 snR80snR80 171 nt-3.65□□□□□ -2.99
XRN1P22147 YNR025CYNR025C 360 nt-3.68□□□□□ -3
XRN1P22147 YOL155W-AYOL155W-A 135 nt-3.68□□□□□ -3
XRN1P22147 YBR109W-AYBR109W-A 225 nt-3.7□□□□□ -3
XRN1P22147 snR73snR73 106 nt-3.71□□□□□ -3
XRN1P22147 YPL038W-AYPL038W-A 192 nt-3.75□□□□□ -3.01
XRN1P22147 tL(UAA)QtL(UAA)Q 85 nt-3.76□□□□□ -3.01
XRN1P22147 YJL150WYJL150W 303 nt-3.76□□□□□ -3.01
XRN1P22147 YNL097C-BYNL097C-B 123 nt-3.76□□□□□ -3.01
XRN1P22147 RPL41BYDL133C-A 78 nt-3.79□□□□□ -3.02
XRN1P22147 YDR524C-AYDR524C-A 120 nt-3.8□□□□□ -3.02
XRN1P22147 YOR335W-AYOR335W-A 81 nt-3.8□□□□□ -3.02
XRN1P22147 RPL41AYDL184C 78 nt-3.82□□□□□ -3.02
XRN1P22147 snR56snR56 88 nt-3.83□□□□□ -3.02
XRN1P22147 YBR296C-AYBR296C-A 120 nt-3.85□□□□□ -3.03
XRN1P22147 YNL198CYNL198C 303 nt-3.92□□□□□ -3.04
XRN1P22147 GIM4YEL003W 336 nt-3.93□□□□□ -3.04
XRN1P22147 snR38snR38 95 nt-3.95□□□□□ -3.04
XRN1P22147 RPL39YJL189W 156 nt-3.96□□□□□ -3.04
XRN1P22147 YNL277W-AYNL277W-A 189 nt-4.07□□□□□ -3.06
XRN1P22147 YDR406W-AYDR406W-A 246 nt-4.09□□□□□ -3.06
XRN1P22147 YOR302WYOR302W 78 nt-4.11□□□□□ -3.07
XRN1P22147 snR52snR52 92 nt-4.13□□□□□ -3.07
XRN1P22147 YHL015W-AYHL015W-A 84 nt-4.15□□□□□ -3.07
XRN1P22147 tR(UCU)Q1tR(UCU)Q1 73 nt-4.22□□□□□ -3.09
XRN1P22147 SOM1YEL059C-A 225 nt-4.26□□□□□ -3.09
XRN1P22147 tV(UAC)QtV(UAC)Q 76 nt-4.27□□□□□ -3.09
XRN1P22147 YCR095W-AYCR095W-A 159 nt-4.28□□□□□ -3.09
XRN1P22147 snR85snR85 171 nt-4.29□□□□□ -3.1
XRN1P22147 snR87snR87 109 nt-4.32□□□□□ -3.1
XRN1P22147 YDL240C-AYDL240C-A 138 nt-4.33□□□□□ -3.1
XRN1P22147 YOL164W-AYOL164W-A 183 nt-4.34□□□□□ -3.1
XRN1P22147 YEL050W-AYEL050W-A 192 nt-4.39□□□□□ -3.11
XRN1P22147 YDL114W-AYDL114W-A 114 nt-4.4□□□□□ -3.11
XRN1P22147 YBL071C-BYBL071C-B 99 nt-4.4□□□□□ -3.11
XRN1P22147 YGR151CYGR151C 336 nt-4.48□□□□□ -3.13
XRN1P22147 snR47snR47 99 nt-4.48□□□□□ -3.13
XRN1P22147 YDR157WYDR157W 402 nt-4.49□□□□□ -3.13
XRN1P22147 YPL152W-AYPL152W-A 99 nt-4.66□□□□□ -3.15
XRN1P22147 YKL225WYKL225W 348 nt-4.7□□□□□ -3.16
XRN1P22147 YAL037C-AYAL037C-A 93 nt-4.72□□□□□ -3.16
XRN1P22147 snR58snR58 96 nt-4.76□□□□□ -3.17
XRN1P22147 YBL100W-CYBL100W-C 120 nt-4.76□□□□□ -3.17
XRN1P22147 snR65snR65 100 nt-4.79□□□□□ -3.18
XRN1P22147 YDR118W-AYDR118W-A 117 nt-4.81□□□□□ -3.18
XRN1P22147 YBL053WYBL053W 375 nt-4.81□□□□□ -3.18
XRN1P22147 SPG3YDR504C 384 nt-4.83□□□□□ -3.18
XRN1P22147 YHR175W-AYHR175W-A 150 nt-4.85□□□□□ -3.19
XRN1P22147 YKL096C-BYKL096C-B 150 nt-4.88□□□□□ -3.19
XRN1P22147 tS(GCU)Q1tS(GCU)Q1 86 nt-4.93□□□□□ -3.2
XRN1P22147 Q0017Q0017 162 nt-5.08□□□□□ -3.22
XRN1P22147 YDL159W-AYDL159W-A 132 nt-5.13□□□□□ -3.23
XRN1P22147 YGR122C-AYGR122C-A 129 nt-5.16□□□□□ -3.24
XRN1P22147 YDR034C-AYDR034C-A 177 nt-5.28□□□□□ -3.25
XRN1P22147 YJL136W-AYJL136W-A 84 nt-5.33□□□□□ -3.26
XRN1P22147 YCL001W-BYCL001W-B 255 nt-5.35□□□□□ -3.27
XRN1P22147 YGL007C-AYGL007C-A 87 nt-5.39□□□□□ -3.27
XRN1P22147 VAR1Q0140 1197 nt-5.39□□□□□ -3.27
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms