Protein–RNA interactions for Protein: P0CX14

YRF1-3, Y' element ATP-dependent helicase protein 1 copy 3, yeastyeast

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3P0CX14 YOR008C-AYOR008C-A 225 nt-1.54□□□□□ -2.66
YRF1-3P0CX14 snR67snR67 82 nt-1.54□□□□□ -2.66
YRF1-3P0CX14 snR81snR81 201 nt-1.54□□□□□ -2.66
YRF1-3P0CX14 YAL016C-BYAL016C-B 186 nt-1.56□□□□□ -2.66
YRF1-3P0CX14 YOL166W-AYOL166W-A 156 nt-1.56□□□□□ -2.66
YRF1-3P0CX14 YGL041CYGL041C 204 nt-1.57□□□□□ -2.66
YRF1-3P0CX14 YOR381W-AYOR381W-A 168 nt-1.57□□□□□ -2.66
YRF1-3P0CX14 CDC65tQ(CUG)M 72 nt-1.58□□□□□ -2.66
YRF1-3P0CX14 YOR329W-AYOR329W-A 210 nt-1.58□□□□□ -2.66
YRF1-3P0CX14 YNL205CYNL205C 423 nt-1.59□□□□□ -2.66
YRF1-3P0CX14 YML054C-AYML054C-A 159 nt-1.61□□□□□ -2.67
YRF1-3P0CX14 YPR197CYPR197C 564 nt-1.61□□□□□ -2.67
YRF1-3P0CX14 YDR413CYDR413C 576 nt-1.62□□□□□ -2.67
YRF1-3P0CX14 YJR157WYJR157W 363 nt-1.62□□□□□ -2.67
YRF1-3P0CX14 YER181CYER181C 324 nt-1.63□□□□□ -2.67
YRF1-3P0CX14 YBR196C-AYBR196C-A 150 nt-1.64□□□□□ -2.67
YRF1-3P0CX14 YGR240C-AYGR240C-A 201 nt-1.67□□□□□ -2.68
YRF1-3P0CX14 YDL159C-BYDL159C-B 177 nt-1.69□□□□□ -2.68
YRF1-3P0CX14 YLR286W-AYLR286W-A 135 nt-1.71□□□□□ -2.68
YRF1-3P0CX14 tF(GAA)QtF(GAA)Q 75 nt-1.72□□□□□ -2.68
YRF1-3P0CX14 YKL118WYKL118W 312 nt-1.72□□□□□ -2.68
YRF1-3P0CX14 YBR131C-AYBR131C-A 90 nt-1.72□□□□□ -2.68
YRF1-3P0CX14 YBR178WYBR178W 375 nt-1.73□□□□□ -2.69
YRF1-3P0CX14 YPL038W-AYPL038W-A 192 nt-1.8□□□□□ -2.7
YRF1-3P0CX14 YDR157WYDR157W 402 nt-1.8□□□□□ -2.7
YRF1-3P0CX14 YBR126W-BYBR126W-B 144 nt-1.82□□□□□ -2.7
YRF1-3P0CX14 snR55snR55 98 nt-1.82□□□□□ -2.7
YRF1-3P0CX14 YLR299C-AYLR299C-A 93 nt-1.83□□□□□ -2.7
YRF1-3P0CX14 YOR376W-AYOR376W-A 156 nt-1.84□□□□□ -2.7
YRF1-3P0CX14 RPL39YJL189W 156 nt-1.87□□□□□ -2.71
YRF1-3P0CX14 YLR342W-AYLR342W-A 174 nt-1.88□□□□□ -2.71
YRF1-3P0CX14 YHR180C-BYHR180C-B 105 nt-1.88□□□□□ -2.71
YRF1-3P0CX14 YDL240C-AYDL240C-A 138 nt-1.9□□□□□ -2.71
YRF1-3P0CX14 YNL097C-BYNL097C-B 123 nt-1.9□□□□□ -2.71
YRF1-3P0CX14 YOR102WYOR102W 351 nt-1.92□□□□□ -2.72
YRF1-3P0CX14 YLR222C-AYLR222C-A 231 nt-1.93□□□□□ -2.72
YRF1-3P0CX14 Q0017Q0017 162 nt-1.94□□□□□ -2.72
YRF1-3P0CX14 YDR543CYDR543C 300 nt-1.94□□□□□ -2.72
YRF1-3P0CX14 YOR316C-AYOR316C-A 210 nt-1.96□□□□□ -2.72
YRF1-3P0CX14 YMR315W-AYMR315W-A 108 nt-1.97□□□□□ -2.72
YRF1-3P0CX14 Q0142Q0142 177 nt-1.97□□□□□ -2.73
YRF1-3P0CX14 YOR302WYOR302W 78 nt-1.97□□□□□ -2.73
YRF1-3P0CX14 snR48snR48 113 nt-1.99□□□□□ -2.73
YRF1-3P0CX14 YNL277W-AYNL277W-A 189 nt-2□□□□□ -2.73
YRF1-3P0CX14 YGL188C-AYGL188C-A 141 nt-2.02□□□□□ -2.73
YRF1-3P0CX14 tL(UAA)QtL(UAA)Q 85 nt-2.03□□□□□ -2.73
YRF1-3P0CX14 YOR309CYOR309C 381 nt-2.06□□□□□ -2.74
YRF1-3P0CX14 GIM4YEL003W 336 nt-2.07□□□□□ -2.74
YRF1-3P0CX14 YNL198CYNL198C 303 nt-2.07□□□□□ -2.74
YRF1-3P0CX14 YDR118W-AYDR118W-A 117 nt-2.09□□□□□ -2.74
YRF1-3P0CX14 YPR012WYPR012W 255 nt-2.09□□□□□ -2.74
YRF1-3P0CX14 YJL150WYJL150W 303 nt-2.14□□□□□ -2.75
YRF1-3P0CX14 YOL155W-AYOL155W-A 135 nt-2.17□□□□□ -2.76
YRF1-3P0CX14 snR52snR52 92 nt-2.18□□□□□ -2.76
YRF1-3P0CX14 RPL41AYDL184C 78 nt-2.19□□□□□ -2.76
YRF1-3P0CX14 YHL015W-AYHL015W-A 84 nt-2.24□□□□□ -2.77
YRF1-3P0CX14 VAR1Q0140 1197 nt-2.24□□□□□ -2.77
YRF1-3P0CX14 YKL106C-AYKL106C-A 120 nt-2.26□□□□□ -2.77
YRF1-3P0CX14 snR56snR56 88 nt-2.31□□□□□ -2.78
YRF1-3P0CX14 snR65snR65 100 nt-2.31□□□□□ -2.78
YRF1-3P0CX14 YPL152W-AYPL152W-A 99 nt-2.31□□□□□ -2.78
YRF1-3P0CX14 snR38snR38 95 nt-2.32□□□□□ -2.78
YRF1-3P0CX14 YBR296C-AYBR296C-A 120 nt-2.33□□□□□ -2.78
YRF1-3P0CX14 SOM1YEL059C-A 225 nt-2.36□□□□□ -2.79
YRF1-3P0CX14 YCR095W-AYCR095W-A 159 nt-2.38□□□□□ -2.79
YRF1-3P0CX14 YBR109W-AYBR109W-A 225 nt-2.39□□□□□ -2.79
YRF1-3P0CX14 snR80snR80 171 nt-2.39□□□□□ -2.79
YRF1-3P0CX14 YDR524W-CYDR524W-C 90 nt-2.42□□□□□ -2.8
YRF1-3P0CX14 YOL083C-AYOL083C-A 141 nt-2.43□□□□□ -2.8
YRF1-3P0CX14 snR6snR6 112 nt-2.5□□□□□ -2.81
YRF1-3P0CX14 YGR151CYGR151C 336 nt-2.51□□□□□ -2.81
YRF1-3P0CX14 YDR406W-AYDR406W-A 246 nt-2.52□□□□□ -2.81
YRF1-3P0CX14 YBL071C-BYBL071C-B 99 nt-2.52□□□□□ -2.81
YRF1-3P0CX14 YBL053WYBL053W 375 nt-2.54□□□□□ -2.82
YRF1-3P0CX14 snR47snR47 99 nt-2.6□□□□□ -2.83
YRF1-3P0CX14 YOR335W-AYOR335W-A 81 nt-2.61□□□□□ -2.83
YRF1-3P0CX14 YOL164W-AYOL164W-A 183 nt-2.62□□□□□ -2.83
YRF1-3P0CX14 snR73snR73 106 nt-2.67□□□□□ -2.84
YRF1-3P0CX14 RPL41BYDL133C-A 78 nt-2.71□□□□□ -2.84
YRF1-3P0CX14 YOR231C-AYOR231C-A 201 nt-2.72□□□□□ -2.84
YRF1-3P0CX14 tV(UAC)QtV(UAC)Q 76 nt-2.73□□□□□ -2.85
YRF1-3P0CX14 YAL037C-AYAL037C-A 93 nt-2.77□□□□□ -2.85
YRF1-3P0CX14 YDL114W-AYDL114W-A 114 nt-2.78□□□□□ -2.85
YRF1-3P0CX14 YHR175W-AYHR175W-A 150 nt-2.81□□□□□ -2.86
YRF1-3P0CX14 YDR524C-AYDR524C-A 120 nt-2.88□□□□□ -2.87
YRF1-3P0CX14 tS(GCU)Q1tS(GCU)Q1 86 nt-2.88□□□□□ -2.87
YRF1-3P0CX14 YKL225WYKL225W 348 nt-2.9□□□□□ -2.87
YRF1-3P0CX14 snR85snR85 171 nt-2.9□□□□□ -2.87
YRF1-3P0CX14 YBL100W-CYBL100W-C 120 nt-2.92□□□□□ -2.88
YRF1-3P0CX14 YMR046W-AYMR046W-A 129 nt-2.94□□□□□ -2.88
YRF1-3P0CX14 Q0144Q0144 330 nt-2.96□□□□□ -2.88
YRF1-3P0CX14 tR(ACG)Q2tR(ACG)Q2 74 nt-3.04□□□□□ -2.9
YRF1-3P0CX14 YJR162CYJR162C 351 nt-3.04□□□□□ -2.9
YRF1-3P0CX14 YNL337WYNL337W 255 nt-3.04□□□□□ -2.9
YRF1-3P0CX14 SPG3YDR504C 384 nt-3.09□□□□□ -2.9
YRF1-3P0CX14 YCL001W-BYCL001W-B 255 nt-3.12□□□□□ -2.91
YRF1-3P0CX14 YGR122C-AYGR122C-A 129 nt-3.14□□□□□ -2.91
YRF1-3P0CX14 YDL159W-AYDL159W-A 132 nt-3.17□□□□□ -2.92
YRF1-3P0CX14 YLR466C-BYLR466C-B 117 nt-3.26□□□□□ -2.93
YRF1-3P0CX14 snR87snR87 109 nt-3.27□□□□□ -2.93
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms