Protein–RNA interactions for Protein: P0CG63

UBI4, Polyubiquitin, yeastyeast

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBI4P0CG63 YJR157WYJR157W 363 nt-1.8□□□□□ -2.7
UBI4P0CG63 YOR008C-AYOR008C-A 225 nt-1.82□□□□□ -2.7
UBI4P0CG63 YNL205CYNL205C 423 nt-1.83□□□□□ -2.7
UBI4P0CG63 YFL019CYFL019C 354 nt-1.84□□□□□ -2.7
UBI4P0CG63 YGR240C-AYGR240C-A 201 nt-1.84□□□□□ -2.7
UBI4P0CG63 YML054C-AYML054C-A 159 nt-1.84□□□□□ -2.7
UBI4P0CG63 YEL014CYEL014C 306 nt-1.85□□□□□ -2.71
UBI4P0CG63 YPL038W-AYPL038W-A 192 nt-1.87□□□□□ -2.71
UBI4P0CG63 snR77snR77 88 nt-1.88□□□□□ -2.71
UBI4P0CG63 tD(GUC)QtD(GUC)Q 75 nt-1.88□□□□□ -2.71
UBI4P0CG63 YLR286W-AYLR286W-A 135 nt-1.9□□□□□ -2.71
UBI4P0CG63 snR81snR81 201 nt-1.92□□□□□ -2.72
UBI4P0CG63 YPR197CYPR197C 564 nt-1.93□□□□□ -2.72
UBI4P0CG63 YMR315W-AYMR315W-A 108 nt-1.94□□□□□ -2.72
UBI4P0CG63 YBR178WYBR178W 375 nt-1.95□□□□□ -2.72
UBI4P0CG63 YNR077CYNR077C 255 nt-1.96□□□□□ -2.72
UBI4P0CG63 YOR329W-AYOR329W-A 210 nt-1.97□□□□□ -2.72
UBI4P0CG63 tF(GAA)QtF(GAA)Q 75 nt-1.98□□□□□ -2.73
UBI4P0CG63 YER181CYER181C 324 nt-1.98□□□□□ -2.73
UBI4P0CG63 YDL159C-BYDL159C-B 177 nt-1.99□□□□□ -2.73
UBI4P0CG63 YBR131C-AYBR131C-A 90 nt-2□□□□□ -2.73
UBI4P0CG63 RPL39YJL189W 156 nt-2.01□□□□□ -2.73
UBI4P0CG63 YDR157WYDR157W 402 nt-2.04□□□□□ -2.74
UBI4P0CG63 YDR413CYDR413C 576 nt-2.05□□□□□ -2.74
UBI4P0CG63 Q0017Q0017 162 nt-2.13□□□□□ -2.75
UBI4P0CG63 snR55snR55 98 nt-2.14□□□□□ -2.75
UBI4P0CG63 YNL277W-AYNL277W-A 189 nt-2.15□□□□□ -2.75
UBI4P0CG63 YDL240C-AYDL240C-A 138 nt-2.17□□□□□ -2.76
UBI4P0CG63 YOR376W-AYOR376W-A 156 nt-2.2□□□□□ -2.76
UBI4P0CG63 YKL118WYKL118W 312 nt-2.21□□□□□ -2.76
UBI4P0CG63 YLR299C-AYLR299C-A 93 nt-2.21□□□□□ -2.76
UBI4P0CG63 YNL097C-BYNL097C-B 123 nt-2.22□□□□□ -2.76
UBI4P0CG63 YBR196C-AYBR196C-A 150 nt-2.22□□□□□ -2.76
UBI4P0CG63 YLR222C-AYLR222C-A 231 nt-2.23□□□□□ -2.77
UBI4P0CG63 YOR102WYOR102W 351 nt-2.24□□□□□ -2.77
UBI4P0CG63 snR48snR48 113 nt-2.25□□□□□ -2.77
UBI4P0CG63 YOR309CYOR309C 381 nt-2.28□□□□□ -2.77
UBI4P0CG63 GIM4YEL003W 336 nt-2.3□□□□□ -2.78
UBI4P0CG63 YGL188C-AYGL188C-A 141 nt-2.3□□□□□ -2.78
UBI4P0CG63 YBR126W-BYBR126W-B 144 nt-2.33□□□□□ -2.78
UBI4P0CG63 YDR118W-AYDR118W-A 117 nt-2.34□□□□□ -2.78
UBI4P0CG63 YOL155W-AYOL155W-A 135 nt-2.36□□□□□ -2.79
UBI4P0CG63 tL(UAA)QtL(UAA)Q 85 nt-2.38□□□□□ -2.79
UBI4P0CG63 YHR180C-BYHR180C-B 105 nt-2.41□□□□□ -2.8
UBI4P0CG63 YOR316C-AYOR316C-A 210 nt-2.44□□□□□ -2.8
UBI4P0CG63 YLR342W-AYLR342W-A 174 nt-2.46□□□□□ -2.8
UBI4P0CG63 YOR302WYOR302W 78 nt-2.46□□□□□ -2.8
UBI4P0CG63 YPR012WYPR012W 255 nt-2.47□□□□□ -2.8
UBI4P0CG63 VAR1Q0140 1197 nt-2.49□□□□□ -2.81
UBI4P0CG63 YKL106C-AYKL106C-A 120 nt-2.49□□□□□ -2.81
UBI4P0CG63 YHL015W-AYHL015W-A 84 nt-2.5□□□□□ -2.81
UBI4P0CG63 snR52snR52 92 nt-2.5□□□□□ -2.81
UBI4P0CG63 YDR524W-CYDR524W-C 90 nt-2.58□□□□□ -2.82
UBI4P0CG63 YPL152W-AYPL152W-A 99 nt-2.58□□□□□ -2.82
UBI4P0CG63 YJL150WYJL150W 303 nt-2.61□□□□□ -2.83
UBI4P0CG63 snR65snR65 100 nt-2.63□□□□□ -2.83
UBI4P0CG63 YNL198CYNL198C 303 nt-2.73□□□□□ -2.85
UBI4P0CG63 YOL083C-AYOL083C-A 141 nt-2.73□□□□□ -2.85
UBI4P0CG63 YBR109W-AYBR109W-A 225 nt-2.73□□□□□ -2.85
UBI4P0CG63 snR6snR6 112 nt-2.81□□□□□ -2.86
UBI4P0CG63 YBR296C-AYBR296C-A 120 nt-2.81□□□□□ -2.86
UBI4P0CG63 RPL41AYDL184C 78 nt-2.83□□□□□ -2.86
UBI4P0CG63 snR56snR56 88 nt-2.85□□□□□ -2.87
UBI4P0CG63 SOM1YEL059C-A 225 nt-2.86□□□□□ -2.87
UBI4P0CG63 snR80snR80 171 nt-2.9□□□□□ -2.87
UBI4P0CG63 YOR335W-AYOR335W-A 81 nt-2.9□□□□□ -2.87
UBI4P0CG63 snR73snR73 106 nt-2.94□□□□□ -2.88
UBI4P0CG63 snR38snR38 95 nt-2.96□□□□□ -2.88
UBI4P0CG63 RPL41BYDL133C-A 78 nt-2.97□□□□□ -2.88
UBI4P0CG63 YCR095W-AYCR095W-A 159 nt-3□□□□□ -2.89
UBI4P0CG63 YDR406W-AYDR406W-A 246 nt-3.02□□□□□ -2.89
UBI4P0CG63 YOR231C-AYOR231C-A 201 nt-3.08□□□□□ -2.9
UBI4P0CG63 YBL053WYBL053W 375 nt-3.09□□□□□ -2.9
UBI4P0CG63 YHR175W-AYHR175W-A 150 nt-3.1□□□□□ -2.91
UBI4P0CG63 YBL071C-BYBL071C-B 99 nt-3.15□□□□□ -2.91
UBI4P0CG63 YGR151CYGR151C 336 nt-3.17□□□□□ -2.92
UBI4P0CG63 YOL164W-AYOL164W-A 183 nt-3.2□□□□□ -2.92
UBI4P0CG63 snR47snR47 99 nt-3.23□□□□□ -2.93
UBI4P0CG63 YDR524C-AYDR524C-A 120 nt-3.25□□□□□ -2.93
UBI4P0CG63 YDR543CYDR543C 300 nt-3.26□□□□□ -2.93
UBI4P0CG63 Q0144Q0144 330 nt-3.26□□□□□ -2.93
UBI4P0CG63 tR(ACG)Q2tR(ACG)Q2 74 nt-3.27□□□□□ -2.93
UBI4P0CG63 YDL114W-AYDL114W-A 114 nt-3.36□□□□□ -2.95
UBI4P0CG63 snR85snR85 171 nt-3.38□□□□□ -2.95
UBI4P0CG63 YBL100W-CYBL100W-C 120 nt-3.38□□□□□ -2.95
UBI4P0CG63 tV(UAC)QtV(UAC)Q 76 nt-3.4□□□□□ -2.95
UBI4P0CG63 YAL037C-AYAL037C-A 93 nt-3.41□□□□□ -2.96
UBI4P0CG63 YKL225WYKL225W 348 nt-3.5□□□□□ -2.97
UBI4P0CG63 SPG3YDR504C 384 nt-3.52□□□□□ -2.97
UBI4P0CG63 tS(GCU)Q1tS(GCU)Q1 86 nt-3.55□□□□□ -2.98
UBI4P0CG63 YMR046W-AYMR046W-A 129 nt-3.59□□□□□ -2.98
UBI4P0CG63 YCL001W-BYCL001W-B 255 nt-3.6□□□□□ -2.99
UBI4P0CG63 snR87snR87 109 nt-3.68□□□□□ -3
UBI4P0CG63 YGR122C-AYGR122C-A 129 nt-3.82□□□□□ -3.02
UBI4P0CG63 YNL337WYNL337W 255 nt-3.85□□□□□ -3.03
UBI4P0CG63 YKL096C-BYKL096C-B 150 nt-3.86□□□□□ -3.03
UBI4P0CG63 YDL159W-AYDL159W-A 132 nt-3.88□□□□□ -3.03
UBI4P0CG63 YDR034C-AYDR034C-A 177 nt-3.96□□□□□ -3.04
UBI4P0CG63 Q0142Q0142 177 nt-3.96□□□□□ -3.04
UBI4P0CG63 tM(CAU)Q1tM(CAU)Q1 76 nt-4.01□□□□□ -3.05
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms