Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 snR81snR81 201 nt-1.5□□□□□ -2.65
TY1B-HO13535 YEL014CYEL014C 306 nt-1.5□□□□□ -2.65
TY1B-HO13535 YOR381W-AYOR381W-A 168 nt-1.51□□□□□ -2.65
TY1B-HO13535 YGL041CYGL041C 204 nt-1.52□□□□□ -2.65
TY1B-HO13535 YAL016C-BYAL016C-B 186 nt-1.53□□□□□ -2.65
TY1B-HO13535 snR77snR77 88 nt-1.54□□□□□ -2.66
TY1B-HO13535 YML054C-AYML054C-A 159 nt-1.54□□□□□ -2.66
TY1B-HO13535 CDC65tQ(CUG)M 72 nt-1.56□□□□□ -2.66
TY1B-HO13535 YNL205CYNL205C 423 nt-1.57□□□□□ -2.66
TY1B-HO13535 YOR329W-AYOR329W-A 210 nt-1.59□□□□□ -2.66
TY1B-HO13535 YPR197CYPR197C 564 nt-1.59□□□□□ -2.66
TY1B-HO13535 YBR196C-AYBR196C-A 150 nt-1.59□□□□□ -2.66
TY1B-HO13535 YDL159C-BYDL159C-B 177 nt-1.61□□□□□ -2.67
TY1B-HO13535 YDR413CYDR413C 576 nt-1.62□□□□□ -2.67
TY1B-HO13535 YGR240C-AYGR240C-A 201 nt-1.62□□□□□ -2.67
TY1B-HO13535 YLR286W-AYLR286W-A 135 nt-1.62□□□□□ -2.67
TY1B-HO13535 YER181CYER181C 324 nt-1.63□□□□□ -2.67
TY1B-HO13535 YJR157WYJR157W 363 nt-1.66□□□□□ -2.68
TY1B-HO13535 tF(GAA)QtF(GAA)Q 75 nt-1.68□□□□□ -2.68
TY1B-HO13535 YBR131C-AYBR131C-A 90 nt-1.69□□□□□ -2.68
TY1B-HO13535 YBR178WYBR178W 375 nt-1.7□□□□□ -2.68
TY1B-HO13535 YBR126W-BYBR126W-B 144 nt-1.7□□□□□ -2.68
TY1B-HO13535 YKL118WYKL118W 312 nt-1.71□□□□□ -2.68
TY1B-HO13535 snR55snR55 98 nt-1.75□□□□□ -2.69
TY1B-HO13535 YDR157WYDR157W 402 nt-1.77□□□□□ -2.69
TY1B-HO13535 YPL038W-AYPL038W-A 192 nt-1.77□□□□□ -2.69
TY1B-HO13535 YLR299C-AYLR299C-A 93 nt-1.79□□□□□ -2.7
TY1B-HO13535 RPL39YJL189W 156 nt-1.8□□□□□ -2.7
TY1B-HO13535 YOR102WYOR102W 351 nt-1.82□□□□□ -2.7
TY1B-HO13535 YOR376W-AYOR376W-A 156 nt-1.82□□□□□ -2.7
TY1B-HO13535 YHR180C-BYHR180C-B 105 nt-1.82□□□□□ -2.7
TY1B-HO13535 YLR342W-AYLR342W-A 174 nt-1.85□□□□□ -2.7
TY1B-HO13535 YDL240C-AYDL240C-A 138 nt-1.87□□□□□ -2.71
TY1B-HO13535 YMR315W-AYMR315W-A 108 nt-1.87□□□□□ -2.71
TY1B-HO13535 YOL166W-AYOL166W-A 156 nt-1.87□□□□□ -2.71
TY1B-HO13535 Q0017Q0017 162 nt-1.87□□□□□ -2.71
TY1B-HO13535 YLR222C-AYLR222C-A 231 nt-1.9□□□□□ -2.71
TY1B-HO13535 YOR316C-AYOR316C-A 210 nt-1.9□□□□□ -2.71
TY1B-HO13535 YNL097C-BYNL097C-B 123 nt-1.93□□□□□ -2.72
TY1B-HO13535 snR48snR48 113 nt-1.94□□□□□ -2.72
TY1B-HO13535 YGL188C-AYGL188C-A 141 nt-1.98□□□□□ -2.73
TY1B-HO13535 YNL277W-AYNL277W-A 189 nt-1.98□□□□□ -2.73
TY1B-HO13535 YOR302WYOR302W 78 nt-1.98□□□□□ -2.73
TY1B-HO13535 YOR309CYOR309C 381 nt-2.02□□□□□ -2.73
TY1B-HO13535 GIM4YEL003W 336 nt-2.03□□□□□ -2.73
TY1B-HO13535 tL(UAA)QtL(UAA)Q 85 nt-2.03□□□□□ -2.73
TY1B-HO13535 YNL198CYNL198C 303 nt-2.05□□□□□ -2.74
TY1B-HO13535 YOL155W-AYOL155W-A 135 nt-2.06□□□□□ -2.74
TY1B-HO13535 YPR012WYPR012W 255 nt-2.08□□□□□ -2.74
TY1B-HO13535 YDR118W-AYDR118W-A 117 nt-2.1□□□□□ -2.75
TY1B-HO13535 snR52snR52 92 nt-2.1□□□□□ -2.75
TY1B-HO13535 YJL150WYJL150W 303 nt-2.13□□□□□ -2.75
TY1B-HO13535 RPL41AYDL184C 78 nt-2.14□□□□□ -2.75
TY1B-HO13535 YDR543CYDR543C 300 nt-2.15□□□□□ -2.75
TY1B-HO13535 YKL106C-AYKL106C-A 120 nt-2.16□□□□□ -2.76
TY1B-HO13535 YHL015W-AYHL015W-A 84 nt-2.19□□□□□ -2.76
TY1B-HO13535 snR56snR56 88 nt-2.22□□□□□ -2.76
TY1B-HO13535 Q0142Q0142 177 nt-2.22□□□□□ -2.76
TY1B-HO13535 VAR1Q0140 1197 nt-2.23□□□□□ -2.77
TY1B-HO13535 YBR296C-AYBR296C-A 120 nt-2.27□□□□□ -2.77
TY1B-HO13535 snR65snR65 100 nt-2.28□□□□□ -2.78
TY1B-HO13535 YCR095W-AYCR095W-A 159 nt-2.29□□□□□ -2.78
TY1B-HO13535 SOM1YEL059C-A 225 nt-2.29□□□□□ -2.78
TY1B-HO13535 YPL152W-AYPL152W-A 99 nt-2.3□□□□□ -2.78
TY1B-HO13535 YDR524W-CYDR524W-C 90 nt-2.31□□□□□ -2.78
TY1B-HO13535 snR38snR38 95 nt-2.32□□□□□ -2.78
TY1B-HO13535 YBR109W-AYBR109W-A 225 nt-2.33□□□□□ -2.78
TY1B-HO13535 snR80snR80 171 nt-2.33□□□□□ -2.78
TY1B-HO13535 YOL083C-AYOL083C-A 141 nt-2.36□□□□□ -2.79
TY1B-HO13535 snR6snR6 112 nt-2.44□□□□□ -2.8
TY1B-HO13535 YDR406W-AYDR406W-A 246 nt-2.44□□□□□ -2.8
TY1B-HO13535 YGR151CYGR151C 336 nt-2.46□□□□□ -2.8
TY1B-HO13535 YBL071C-BYBL071C-B 99 nt-2.51□□□□□ -2.81
TY1B-HO13535 YOL164W-AYOL164W-A 183 nt-2.53□□□□□ -2.81
TY1B-HO13535 snR47snR47 99 nt-2.54□□□□□ -2.82
TY1B-HO13535 YBL053WYBL053W 375 nt-2.56□□□□□ -2.82
TY1B-HO13535 RPL41BYDL133C-A 78 nt-2.56□□□□□ -2.82
TY1B-HO13535 YOR335W-AYOR335W-A 81 nt-2.59□□□□□ -2.82
TY1B-HO13535 snR73snR73 106 nt-2.63□□□□□ -2.83
TY1B-HO13535 YOR231C-AYOR231C-A 201 nt-2.68□□□□□ -2.84
TY1B-HO13535 tV(UAC)QtV(UAC)Q 76 nt-2.69□□□□□ -2.84
TY1B-HO13535 YAL037C-AYAL037C-A 93 nt-2.7□□□□□ -2.84
TY1B-HO13535 YDL114W-AYDL114W-A 114 nt-2.71□□□□□ -2.84
TY1B-HO13535 YHR175W-AYHR175W-A 150 nt-2.74□□□□□ -2.85
TY1B-HO13535 snR85snR85 171 nt-2.77□□□□□ -2.85
TY1B-HO13535 YDR524C-AYDR524C-A 120 nt-2.77□□□□□ -2.85
TY1B-HO13535 YBL100W-CYBL100W-C 120 nt-2.79□□□□□ -2.86
TY1B-HO13535 YKL225WYKL225W 348 nt-2.82□□□□□ -2.86
TY1B-HO13535 tS(GCU)Q1tS(GCU)Q1 86 nt-2.84□□□□□ -2.86
TY1B-HO13535 YMR046W-AYMR046W-A 129 nt-2.85□□□□□ -2.87
TY1B-HO13535 YJR162CYJR162C 351 nt-2.91□□□□□ -2.88
TY1B-HO13535 YNL337WYNL337W 255 nt-2.91□□□□□ -2.88
TY1B-HO13535 Q0144Q0144 330 nt-2.92□□□□□ -2.88
TY1B-HO13535 tR(ACG)Q2tR(ACG)Q2 74 nt-2.95□□□□□ -2.88
TY1B-HO13535 SPG3YDR504C 384 nt-3.01□□□□□ -2.89
TY1B-HO13535 YCL001W-BYCL001W-B 255 nt-3.05□□□□□ -2.9
TY1B-HO13535 YDL159W-AYDL159W-A 132 nt-3.1□□□□□ -2.91
TY1B-HO13535 YGR122C-AYGR122C-A 129 nt-3.1□□□□□ -2.91
TY1B-HO13535 snR58snR58 96 nt-3.17□□□□□ -2.92
TY1B-HO13535 snR87snR87 109 nt-3.17□□□□□ -2.92
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms