Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRTAP3-3Q9BYR6 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC15.73■□□□□ 0.11
KRTAP3-3Q9BYR6 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRTAP3-3Q9BYR6 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRTAP3-3Q9BYR6 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC15.72■□□□□ 0.11
KRTAP3-3Q9BYR6 AC063950.1-202ENST00000600133 568 ntBASIC15.72■□□□□ 0.11
KRTAP3-3Q9BYR6 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRTAP3-3Q9BYR6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.71■□□□□ 0.11
KRTAP3-3Q9BYR6 AC087272.1-201ENST00000523624 533 ntBASIC15.71■□□□□ 0.11
KRTAP3-3Q9BYR6 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC15.71■□□□□ 0.11
KRTAP3-3Q9BYR6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC15.71■□□□□ 0.11
KRTAP3-3Q9BYR6 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC15.71■□□□□ 0.11
KRTAP3-3Q9BYR6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRTAP3-3Q9BYR6 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRTAP3-3Q9BYR6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRTAP3-3Q9BYR6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRTAP3-3Q9BYR6 AC013470.3-201ENST00000420252 1194 ntBASIC15.69■□□□□ 0.1
KRTAP3-3Q9BYR6 PRELID3BP7-201ENST00000503606 469 ntBASIC15.69■□□□□ 0.1
KRTAP3-3Q9BYR6 AL158211.1-201ENST00000566763 763 ntBASIC15.69■□□□□ 0.1
KRTAP3-3Q9BYR6 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.68■□□□□ 0.1
KRTAP3-3Q9BYR6 AL390039.1-201ENST00000399148 611 ntBASIC15.68■□□□□ 0.1
KRTAP3-3Q9BYR6 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC15.68■□□□□ 0.1
KRTAP3-3Q9BYR6 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC15.68■□□□□ 0.1
KRTAP3-3Q9BYR6 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.67■□□□□ 0.1
KRTAP3-3Q9BYR6 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC15.67■□□□□ 0.1
KRTAP3-3Q9BYR6 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC15.67■□□□□ 0.1
KRTAP3-3Q9BYR6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRTAP3-3Q9BYR6 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.66■□□□□ 0.1
KRTAP3-3Q9BYR6 AC040160.2-201ENST00000623816 1675 ntBASIC15.66■□□□□ 0.1
KRTAP3-3Q9BYR6 MTCO1P15-201ENST00000529569 1526 ntBASIC15.65■□□□□ 0.1
KRTAP3-3Q9BYR6 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRTAP3-3Q9BYR6 AP001981.1-201ENST00000531132 738 ntBASIC15.65■□□□□ 0.1
KRTAP3-3Q9BYR6 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC15.65■□□□□ 0.1
KRTAP3-3Q9BYR6 AC013470.4-201ENST00000619978 986 ntBASIC15.65■□□□□ 0.1
KRTAP3-3Q9BYR6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
KRTAP3-3Q9BYR6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRTAP3-3Q9BYR6 MTND2P11-201ENST00000423638 648 ntBASIC15.64■□□□□ 0.09
KRTAP3-3Q9BYR6 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC15.64■□□□□ 0.09
KRTAP3-3Q9BYR6 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRTAP3-3Q9BYR6 AC090506.2-201ENST00000624521 419 ntBASIC15.64■□□□□ 0.09
KRTAP3-3Q9BYR6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
KRTAP3-3Q9BYR6 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRTAP3-3Q9BYR6 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
KRTAP3-3Q9BYR6 ATG10-IT1-201ENST00000396880 487 ntBASIC15.63■□□□□ 0.09
KRTAP3-3Q9BYR6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.63■□□□□ 0.09
KRTAP3-3Q9BYR6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC15.63■□□□□ 0.09
KRTAP3-3Q9BYR6 AC092964.1-201ENST00000623304 1399 ntBASIC15.62■□□□□ 0.09
KRTAP3-3Q9BYR6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC15.62■□□□□ 0.09
KRTAP3-3Q9BYR6 AL357094.1-201ENST00000603845 844 ntBASIC15.62■□□□□ 0.09
KRTAP3-3Q9BYR6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRTAP3-3Q9BYR6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRTAP3-3Q9BYR6 AC093534.1-201ENST00000504977 132 ntBASIC15.61■□□□□ 0.09
KRTAP3-3Q9BYR6 AC026616.1-201ENST00000523157 525 ntBASIC15.61■□□□□ 0.09
KRTAP3-3Q9BYR6 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC15.61■□□□□ 0.09
KRTAP3-3Q9BYR6 AC005014.3-201ENST00000605985 190 ntBASIC15.61■□□□□ 0.09
KRTAP3-3Q9BYR6 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC15.61■□□□□ 0.09
KRTAP3-3Q9BYR6 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC15.6■□□□□ 0.09
KRTAP3-3Q9BYR6 MTND2P38-201ENST00000522536 667 ntBASIC15.6■□□□□ 0.09
KRTAP3-3Q9BYR6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC15.6■□□□□ 0.09
KRTAP3-3Q9BYR6 AL353708.1-201ENST00000567904 1257 ntBASIC15.6■□□□□ 0.09
KRTAP3-3Q9BYR6 ZNF92P3-201ENST00000596594 954 ntBASIC15.6■□□□□ 0.09
KRTAP3-3Q9BYR6 AL157762.1-201ENST00000619612 415 ntBASIC15.6■□□□□ 0.09
KRTAP3-3Q9BYR6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 AC009268.1-201ENST00000561352 1203 ntBASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 RN7SL121P-201ENST00000584223 273 ntBASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 ZNF92P2-201ENST00000600543 1059 ntBASIC15.59■□□□□ 0.09
KRTAP3-3Q9BYR6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRTAP3-3Q9BYR6 ACTG1P22-201ENST00000603793 1099 ntBASIC15.58■□□□□ 0.08
KRTAP3-3Q9BYR6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRTAP3-3Q9BYR6 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC15.57■□□□□ 0.08
KRTAP3-3Q9BYR6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRTAP3-3Q9BYR6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.57■□□□□ 0.08
KRTAP3-3Q9BYR6 AC121493.1-201ENST00000602316 450 ntBASIC15.57■□□□□ 0.08
KRTAP3-3Q9BYR6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.57■□□□□ 0.08
KRTAP3-3Q9BYR6 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC15.56■□□□□ 0.08
KRTAP3-3Q9BYR6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.56■□□□□ 0.08
KRTAP3-3Q9BYR6 AC025423.2-201ENST00000537570 439 ntBASIC15.56■□□□□ 0.08
KRTAP3-3Q9BYR6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC15.56■□□□□ 0.08
KRTAP3-3Q9BYR6 RFC1-217ENST00000639695 867 ntTSL 5 BASIC15.56■□□□□ 0.08
KRTAP3-3Q9BYR6 ACTR6P1-201ENST00000514311 1104 ntBASIC15.55■□□□□ 0.08
KRTAP3-3Q9BYR6 MTND4LP31-201ENST00000514859 294 ntBASIC15.55■□□□□ 0.08
KRTAP3-3Q9BYR6 AC012181.2-201ENST00000570210 699 ntBASIC15.55■□□□□ 0.08
KRTAP3-3Q9BYR6 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC15.55■□□□□ 0.08
KRTAP3-3Q9BYR6 AC108673.3-201ENST00000609183 335 ntBASIC15.55■□□□□ 0.08
KRTAP3-3Q9BYR6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KRTAP3-3Q9BYR6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP3-3Q9BYR6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP3-3Q9BYR6 ZNF736P1Y-201ENST00000440402 1276 ntBASIC15.54■□□□□ 0.08
KRTAP3-3Q9BYR6 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC15.54■□□□□ 0.08
KRTAP3-3Q9BYR6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
KRTAP3-3Q9BYR6 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
KRTAP3-3Q9BYR6 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC15.53■□□□□ 0.08
KRTAP3-3Q9BYR6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC15.53■□□□□ 0.08
KRTAP3-3Q9BYR6 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC15.53■□□□□ 0.08
KRTAP3-3Q9BYR6 AC019227.1-201ENST00000526902 510 ntBASIC15.53■□□□□ 0.08
KRTAP3-3Q9BYR6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms