RNA–Protein interactions for RNA: ENST00000560450.1

AC022558.1-201, humanhuman

TSL 3 BASIC

Gene AC022558.1, Length 454 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC022558.1-201ENST00000560450 AEBP2Q6ZN18 517 aaPredicted RBP36.03■■■■□ 3.36
AC022558.1-201ENST00000560450 CHIC1Q5VXU3 224 aa35.26■■■■□ 3.24
AC022558.1-201ENST00000560450 PHF23Q9BUL5 403 aaPredicted RBP31.11■■■□□ 2.57
AC022558.1-201ENST00000560450 SENP3Q9H4L4 574 aaPredicted RBP30.41■■■□□ 2.46
AC022558.1-201ENST00000560450 PLPPR3Q6T4P5 718 aa28.66■■■□□ 2.18
AC022558.1-201ENST00000560450 FOXD1Q16676 465 aa28.28■■■□□ 2.12
AC022558.1-201ENST00000560450 PPP6R1Q9UPN7 881 aa27.41■■□□□ 1.98
AC022558.1-201ENST00000560450 ADRA2BP18089 450 aa27.36■■□□□ 1.97
AC022558.1-201ENST00000560450 PIAS4Q8N2W9 510 aaPredicted RBP26.67■■□□□ 1.86
AC022558.1-201ENST00000560450 MSH5O43196 834 aa25.91■■□□□ 1.74
AC022558.1-201ENST00000560450 PPP4R3CPQ6ZMV5 832 aa25.31■■□□□ 1.64
AC022558.1-201ENST00000560450 KCNA4P22459 653 aa24.97■■□□□ 1.59
AC022558.1-201ENST00000560450 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
AC022558.1-201ENST00000560450 MAPK8IP2Q13387 824 aaPredicted RBP24.79■■□□□ 1.56
AC022558.1-201ENST00000560450 NCBP3Q53F19 620 aaKnown RBP24.6■■□□□ 1.53
AC022558.1-201ENST00000560450 CNKSR2Q8WXI2 1034 aa24.53■■□□□ 1.52
AC022558.1-201ENST00000560450 NPM3O75607 178 aaKnown RBP24.36■■□□□ 1.49
AC022558.1-201ENST00000560450 DMRT2Q9Y5R5 561 aa24.34■■□□□ 1.49
AC022558.1-201ENST00000560450 RNF216Q9NWF9 866 aaPredicted RBP24.02■■□□□ 1.44
AC022558.1-201ENST00000560450 HOXD11P31277 338 aaPredicted RBP23.9■■□□□ 1.42
AC022558.1-201ENST00000560450 SLC4A1APQ9BWU0 796 aaKnown RBP23.74■■□□□ 1.39
AC022558.1-201ENST00000560450 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
AC022558.1-201ENST00000560450 POTEDQ86YR6 584 aa23.39■■□□□ 1.33
AC022558.1-201ENST00000560450 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
AC022558.1-201ENST00000560450 DCAF8L1A6NGE4 600 aa23.24■■□□□ 1.31
AC022558.1-201ENST00000560450 ZBTB22O15209 634 aa23.03■■□□□ 1.28
AC022558.1-201ENST00000560450 SLC4A2P04920 1241 aa23■■□□□ 1.27
AC022558.1-201ENST00000560450 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
AC022558.1-201ENST00000560450 FOXD4L1Q9NU39 408 aa22.86■■□□□ 1.25
AC022558.1-201ENST00000560450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.23
AC022558.1-201ENST00000560450 U3KPZ7 1027 aaPredicted RBP22.47■■□□□ 1.19
AC022558.1-201ENST00000560450 MYCNP04198 464 aaPredicted RBP22.44■■□□□ 1.18
AC022558.1-201ENST00000560450 RNF39Q9H2S5 420 aa22.29■■□□□ 1.16
AC022558.1-201ENST00000560450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
AC022558.1-201ENST00000560450 HNRNPUL2Q1KMD3 747 aaKnown RBP22.09■■□□□ 1.13
AC022558.1-201ENST00000560450 SAMD1Q6SPF0 538 aaPredicted RBP22.06■■□□□ 1.12
AC022558.1-201ENST00000560450 ATXN8OSP0DMR3 200 aa22.02■■□□□ 1.12
AC022558.1-201ENST00000560450 C1QBPQ07021 282 aaKnown RBP21.97■■□□□ 1.11
AC022558.1-201ENST00000560450 ATF5Q9Y2D1 282 aaPredicted RBP21.96■■□□□ 1.11
AC022558.1-201ENST00000560450 SPINK5Q9NQ38 1064 aaPredicted RBP21.81■■□□□ 1.08
AC022558.1-201ENST00000560450 APLP2Q06481 763 aa21.78■■□□□ 1.08
AC022558.1-201ENST00000560450 CAPN15O75808 1086 aa21.63■■□□□ 1.05
AC022558.1-201ENST00000560450 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
AC022558.1-201ENST00000560450 CACNB1Q02641 598 aaPredicted RBP21.54■■□□□ 1.04
AC022558.1-201ENST00000560450 ZNF219Q9P2Y4 722 aaPredicted RBP21.54■■□□□ 1.04
AC022558.1-201ENST00000560450 ABCB7O75027 752 aa21.28■■□□□ 1
AC022558.1-201ENST00000560450 DSG3P32926 999 aa21.28■■□□□ 1
AC022558.1-201ENST00000560450 POLA2Q14181 598 aa21.28■■□□□ 1
AC022558.1-201ENST00000560450 MKRN4PQ13434 485 aaPredicted RBP20.99■□□□□ 0.95
AC022558.1-201ENST00000560450 FBLN2P98095 1184 aa20.86■□□□□ 0.93
AC022558.1-201ENST00000560450 ZBTB12Q9Y330 459 aaPredicted RBP20.84■□□□□ 0.93
AC022558.1-201ENST00000560450 FKBP8Q14318 412 aa20.73■□□□□ 0.91
AC022558.1-201ENST00000560450 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
AC022558.1-201ENST00000560450 SPDYE4A6NLX3 237 aa20.52■□□□□ 0.88
AC022558.1-201ENST00000560450 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
AC022558.1-201ENST00000560450 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
AC022558.1-201ENST00000560450 SPDYE2Q495Y8 402 aa20.35■□□□□ 0.85
AC022558.1-201ENST00000560450 ZNF692Q9BU19 519 aaPredicted RBP20.31■□□□□ 0.84
AC022558.1-201ENST00000560450 SSUH2Q9Y2M2 353 aa20.27■□□□□ 0.84
AC022558.1-201ENST00000560450 PROM2Q8N271 834 aa20.25■□□□□ 0.83
AC022558.1-201ENST00000560450 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
AC022558.1-201ENST00000560450 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
AC022558.1-201ENST00000560450 AKT1S1Q96B36 256 aa20■□□□□ 0.79
AC022558.1-201ENST00000560450 REM2Q8IYK8 340 aaPredicted RBP19.85■□□□□ 0.77
AC022558.1-201ENST00000560450 FBXO3Q9UK99 471 aa19.85■□□□□ 0.77
AC022558.1-201ENST00000560450 SPDYE1Q8NFV5 336 aaPredicted RBP19.7■□□□□ 0.74
AC022558.1-201ENST00000560450 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
AC022558.1-201ENST00000560450 VASPP50552 380 aaPredicted RBP19.66■□□□□ 0.74
AC022558.1-201ENST00000560450 PITPNM1O00562 1244 aa19.64■□□□□ 0.73
AC022558.1-201ENST00000560450 CLEC11AQ9Y240 323 aa19.63■□□□□ 0.73
AC022558.1-201ENST00000560450 PRR29P0C7W0 189 aa19.46■□□□□ 0.71
AC022558.1-201ENST00000560450 IFNLR1Q8IU57 520 aaPredicted RBP19.45■□□□□ 0.7
AC022558.1-201ENST00000560450 MIER1Q8N108 512 aa19.41■□□□□ 0.7
AC022558.1-201ENST00000560450 PLCD3Q8N3E9 789 aa19.39■□□□□ 0.69
AC022558.1-201ENST00000560450 CHRDL2Q6WN34 429 aa19.33■□□□□ 0.68
AC022558.1-201ENST00000560450 CREBZFQ9NS37 354 aa19.32■□□□□ 0.68
AC022558.1-201ENST00000560450 KLHL34Q8N239 644 aa19.23■□□□□ 0.67
AC022558.1-201ENST00000560450 FXR2P51116 673 aaKnown RBP eCLIP19.22■□□□□ 0.67
AC022558.1-201ENST00000560450 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
AC022558.1-201ENST00000560450 CHADLQ6NUI6 762 aa19.2■□□□□ 0.66
AC022558.1-201ENST00000560450 RTN4Q9NQC3 1192 aaKnown RBP19.18■□□□□ 0.66
AC022558.1-201ENST00000560450 MNX1P50219 401 aaPredicted RBP19.17■□□□□ 0.66
AC022558.1-201ENST00000560450 PIP4P2Q8N4L2 257 aa19.15■□□□□ 0.66
AC022558.1-201ENST00000560450 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
AC022558.1-201ENST00000560450 PRKAR2AP13861 404 aaKnown RBP19.11■□□□□ 0.65
AC022558.1-201ENST00000560450 SPOCK2Q92563 424 aa19.11■□□□□ 0.65
AC022558.1-201ENST00000560450 ZBTB47Q9UFB7 747 aaPredicted RBP19.1■□□□□ 0.65
AC022558.1-201ENST00000560450 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
AC022558.1-201ENST00000560450 NUBP1P53384 320 aa18.97■□□□□ 0.63
AC022558.1-201ENST00000560450 NPM1P06748 294 aaKnown RBP eCLIP18.9■□□□□ 0.62
AC022558.1-201ENST00000560450 PKD2Q13563 968 aa18.87■□□□□ 0.61
AC022558.1-201ENST00000560450 RASEFQ8IZ41 740 aa18.86■□□□□ 0.61
AC022558.1-201ENST00000560450 CIZ1Q9ULV3 898 aaPredicted RBP18.79■□□□□ 0.6
AC022558.1-201ENST00000560450 DCAF8Q5TAQ9 597 aa18.74■□□□□ 0.59
AC022558.1-201ENST00000560450 FAM212AQ96EL1 285 aa18.73■□□□□ 0.59
AC022558.1-201ENST00000560450 GSE1Q14687 1217 aa18.7■□□□□ 0.58
AC022558.1-201ENST00000560450 TSPYL2Q9H2G4 693 aaPredicted RBP18.67■□□□□ 0.58
AC022558.1-201ENST00000560450 ECM2O94769 699 aaPredicted RBP18.65■□□□□ 0.58
AC022558.1-201ENST00000560450 CD44P16070 742 aaKnown RBP18.57■□□□□ 0.56
AC022558.1-201ENST00000560450 C19orf67A6NJJ6 358 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms