Protein–RNA interactions for Protein: Q08887

NDD1, Nuclear division defective protein 1, yeastyeast

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDD1Q08887 SRP54YPR088C 1626 nt8.43□□□□□ -1.06
NDD1Q08887 BUD20YLR074C 501 nt8.43□□□□□ -1.06
NDD1Q08887 FCY1YPR062W 477 nt8.43□□□□□ -1.06
NDD1Q08887 YKL133CYKL133C 1392 nt8.43□□□□□ -1.06
NDD1Q08887 VMA11YPL234C 495 nt8.42□□□□□ -1.06
NDD1Q08887 YGL114WYGL114W 2178 nt8.41□□□□□ -1.06
NDD1Q08887 RPN14YGL004C 1254 nt8.39□□□□□ -1.07
NDD1Q08887 SAN1YDR143C 1833 nt8.38□□□□□ -1.07
NDD1Q08887 SNX3YOR357C 489 nt8.38□□□□□ -1.07
NDD1Q08887 YPL108WYPL108W 507 nt8.36□□□□□ -1.07
NDD1Q08887 KGD2YDR148C 1392 nt8.35□□□□□ -1.07
NDD1Q08887 YFR020WYFR020W 699 nt8.35□□□□□ -1.07
NDD1Q08887 RPD3YNL330C 1302 nt8.34□□□□□ -1.07
NDD1Q08887 PAU21YOR394W 495 nt8.34□□□□□ -1.07
NDD1Q08887 PAU22YPL282C 495 nt8.34□□□□□ -1.07
NDD1Q08887 RIM2YBR192W 1134 nt8.34□□□□□ -1.07
NDD1Q08887 YJL160CYJL160C 864 nt8.33□□□□□ -1.08
NDD1Q08887 YPT11YNL304W 1254 nt8.33□□□□□ -1.08
NDD1Q08887 HIS2YFR025C 1008 nt8.32□□□□□ -1.08
NDD1Q08887 EMC3YKL207W 762 nt8.32□□□□□ -1.08
NDD1Q08887 GRH1YDR517W 1119 nt8.31□□□□□ -1.08
NDD1Q08887 YOR343CYOR343C 327 nt8.31□□□□□ -1.08
NDD1Q08887 HEL2YDR266C 1920 nt8.31□□□□□ -1.08
NDD1Q08887 YMR209CYMR209C 1374 nt8.3□□□□□ -1.08
NDD1Q08887 GAS1YMR307W 1680 nt8.29□□□□□ -1.08
NDD1Q08887 PTC6YCR079W 1329 nt8.29□□□□□ -1.08
NDD1Q08887 SSL2YIL143C 2532 nt8.28□□□□□ -1.08
NDD1Q08887 YMR210WYMR210W 1350 nt8.28□□□□□ -1.08
NDD1Q08887 LSP1YPL004C 1026 nt8.28□□□□□ -1.08
NDD1Q08887 SBP1YHL034C 885 nt8.27□□□□□ -1.09
NDD1Q08887 HRA1HRA1 564 nt8.27□□□□□ -1.09
NDD1Q08887 ODC1YPL134C 933 nt8.27□□□□□ -1.09
NDD1Q08887 PET18YCR020C 648 nt8.25□□□□□ -1.09
NDD1Q08887 RSM7YJR113C 744 nt8.25□□□□□ -1.09
NDD1Q08887 YMR166CYMR166C 1107 nt8.24□□□□□ -1.09
NDD1Q08887 YAL016C-AYAL016C-A 315 nt8.23□□□□□ -1.09
NDD1Q08887 CWP2YKL096W-A 279 nt8.23□□□□□ -1.09
NDD1Q08887 RPC31YNL151C 756 nt8.23□□□□□ -1.09
NDD1Q08887 RPL12BYDR418W 498 nt8.22□□□□□ -1.09
NDD1Q08887 DPL1YDR294C 1770 nt8.2□□□□□ -1.1
NDD1Q08887 MRP1YDR347W 966 nt8.2□□□□□ -1.1
NDD1Q08887 KRR1YCL059C 951 nt8.19□□□□□ -1.1
NDD1Q08887 UTR5YEL035C 501 nt8.18□□□□□ -1.1
NDD1Q08887 CAK1YFL029C 1107 nt8.18□□□□□ -1.1
NDD1Q08887 RRT14YIL127C 621 nt8.17□□□□□ -1.1
NDD1Q08887 THI3YDL080C 1830 nt8.16□□□□□ -1.1
NDD1Q08887 YLR460CYLR460C 1131 nt8.16□□□□□ -1.1
NDD1Q08887 MET22YOL064C 1074 nt8.16□□□□□ -1.1
NDD1Q08887 OCH1YGL038C 1443 nt8.15□□□□□ -1.1
NDD1Q08887 ADA2YDR448W 1305 nt8.15□□□□□ -1.1
NDD1Q08887 YMR316C-BYMR316C-B 309 nt8.15□□□□□ -1.1
NDD1Q08887 GDH1YOR375C 1365 nt8.14□□□□□ -1.11
NDD1Q08887 YJR149WYJR149W 1215 nt8.14□□□□□ -1.11
NDD1Q08887 GGA2YHR108W 1758 nt8.14□□□□□ -1.11
NDD1Q08887 YER156CYER156C 1017 nt8.13□□□□□ -1.11
NDD1Q08887 tL(UAA)B1tL(UAA)B1 84 nt8.13□□□□□ -1.11
NDD1Q08887 tL(UAA)B2tL(UAA)B2 84 nt8.13□□□□□ -1.11
NDD1Q08887 tL(UAA)DtL(UAA)D 84 nt8.13□□□□□ -1.11
NDD1Q08887 SUP51tL(UAA)J 84 nt8.13□□□□□ -1.11
NDD1Q08887 tL(UAA)KtL(UAA)K 84 nt8.13□□□□□ -1.11
NDD1Q08887 tL(UAA)LtL(UAA)L 84 nt8.13□□□□□ -1.11
NDD1Q08887 tL(UAA)NtL(UAA)N 84 nt8.13□□□□□ -1.11
NDD1Q08887 MFT1YML062C 1179 nt8.13□□□□□ -1.11
NDD1Q08887 CHS7YHR142W 951 nt8.12□□□□□ -1.11
NDD1Q08887 DMA2YNL116W 1569 nt8.12□□□□□ -1.11
NDD1Q08887 MAE1YKL029C 2010 nt8.11□□□□□ -1.11
NDD1Q08887 MDM35YKL053C-A 261 nt8.1□□□□□ -1.11
NDD1Q08887 GPM1YKL152C 744 nt8.1□□□□□ -1.11
NDD1Q08887 KAE1YKR038C 1161 nt8.1□□□□□ -1.11
NDD1Q08887 RNA170RNA170 169 nt8.1□□□□□ -1.11
NDD1Q08887 YOR268CYOR268C 399 nt8.1□□□□□ -1.11
NDD1Q08887 PDC6YGR087C 1692 nt8.09□□□□□ -1.11
NDD1Q08887 YHR218WYHR218W 1812 nt8.09□□□□□ -1.11
NDD1Q08887 BXI1YNL305C 894 nt8.09□□□□□ -1.11
NDD1Q08887 RPS6AYPL090C 711 nt8.09□□□□□ -1.11
NDD1Q08887 RPS6BYBR181C 711 nt8.09□□□□□ -1.11
NDD1Q08887 ELP4YPL101W 1371 nt8.09□□□□□ -1.12
NDD1Q08887 LEU4YNL104C 1860 nt8.09□□□□□ -1.12
NDD1Q08887 TAD2YJL035C 753 nt8.08□□□□□ -1.12
NDD1Q08887 OLA1YBR025C 1185 nt8.08□□□□□ -1.12
NDD1Q08887 YDR467CYDR467C 327 nt8.07□□□□□ -1.12
NDD1Q08887 EDC2YER035W 438 nt8.06□□□□□ -1.12
NDD1Q08887 PSD1YNL169C 1503 nt8.06□□□□□ -1.12
NDD1Q08887 HXT10YFL011W 1641 nt8.06□□□□□ -1.12
NDD1Q08887 YPR084WYPR084W 1371 nt8.04□□□□□ -1.12
NDD1Q08887 TOS1YBR162C 1368 nt8.04□□□□□ -1.12
NDD1Q08887 YIR035CYIR035C 765 nt8.02□□□□□ -1.13
NDD1Q08887 ADE1YAR015W 921 nt8.02□□□□□ -1.13
NDD1Q08887 AAC3YBR085W 924 nt8.02□□□□□ -1.13
NDD1Q08887 ATP2YJR121W 1536 nt8.02□□□□□ -1.13
NDD1Q08887 tE(CUC)DtE(CUC)D 72 nt8□□□□□ -1.13
NDD1Q08887 tE(CUC)ItE(CUC)I 72 nt8□□□□□ -1.13
NDD1Q08887 YPT31YER031C 672 nt8□□□□□ -1.13
NDD1Q08887 YMR206WYMR206W 942 nt8□□□□□ -1.13
NDD1Q08887 MFG1YDL233W 1377 nt7.99□□□□□ -1.13
NDD1Q08887 TMS1YDR105C 1422 nt7.99□□□□□ -1.13
NDD1Q08887 TDH1YJL052W 999 nt7.99□□□□□ -1.13
NDD1Q08887 YBL095WYBL095W 813 nt7.99□□□□□ -1.13
NDD1Q08887 RHO1YPR165W 630 nt7.99□□□□□ -1.13
NDD1Q08887 YJL043WYJL043W 774 nt7.98□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms