Protein–RNA interactions for Protein: Q07657

SHS1, Seventh homolog of septin 1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHS1Q07657 YGR210CYGR210C 1236 nt8.91□□□□□ -0.98
SHS1Q07657 RIM2YBR192W 1134 nt8.91□□□□□ -0.98
SHS1Q07657 SSL2YIL143C 2532 nt8.91□□□□□ -0.98
SHS1Q07657 HIS2YFR025C 1008 nt8.9□□□□□ -0.98
SHS1Q07657 KGD2YDR148C 1392 nt8.89□□□□□ -0.99
SHS1Q07657 TGA1tA(UGC)A 73 nt8.89□□□□□ -0.99
SHS1Q07657 tA(UGC)EtA(UGC)E 73 nt8.89□□□□□ -0.99
SHS1Q07657 tA(UGC)GtA(UGC)G 73 nt8.89□□□□□ -0.99
SHS1Q07657 tA(UGC)LtA(UGC)L 73 nt8.89□□□□□ -0.99
SHS1Q07657 tA(UGC)OtA(UGC)O 73 nt8.89□□□□□ -0.99
SHS1Q07657 YPT11YNL304W 1254 nt8.89□□□□□ -0.99
SHS1Q07657 YFR020WYFR020W 699 nt8.88□□□□□ -0.99
SHS1Q07657 RCR1YBR005W 642 nt8.88□□□□□ -0.99
SHS1Q07657 KRR1YCL059C 951 nt8.87□□□□□ -0.99
SHS1Q07657 HSL7YBR133C 2484 nt8.85□□□□□ -0.99
SHS1Q07657 YPL108WYPL108W 507 nt8.85□□□□□ -0.99
SHS1Q07657 RPC31YNL151C 756 nt8.84□□□□□ -0.99
SHS1Q07657 ODC1YPL134C 933 nt8.83□□□□□ -1
SHS1Q07657 SBP1YHL034C 885 nt8.82□□□□□ -1
SHS1Q07657 GAS1YMR307W 1680 nt8.81□□□□□ -1
SHS1Q07657 FCY1YPR062W 477 nt8.81□□□□□ -1
SHS1Q07657 PTC6YCR079W 1329 nt8.8□□□□□ -1
SHS1Q07657 YJL160CYJL160C 864 nt8.8□□□□□ -1
SHS1Q07657 DPL1YDR294C 1770 nt8.8□□□□□ -1
SHS1Q07657 RSM7YJR113C 744 nt8.77□□□□□ -1.01
SHS1Q07657 BUD20YLR074C 501 nt8.77□□□□□ -1.01
SHS1Q07657 PAU21YOR394W 495 nt8.76□□□□□ -1.01
SHS1Q07657 PAU22YPL282C 495 nt8.76□□□□□ -1.01
SHS1Q07657 YMR166CYMR166C 1107 nt8.75□□□□□ -1.01
SHS1Q07657 YMR316C-BYMR316C-B 309 nt8.75□□□□□ -1.01
SHS1Q07657 EMC3YKL207W 762 nt8.74□□□□□ -1.01
SHS1Q07657 MDM35YKL053C-A 261 nt8.73□□□□□ -1.01
SHS1Q07657 YOR343CYOR343C 327 nt8.73□□□□□ -1.01
SHS1Q07657 THI3YDL080C 1830 nt8.72□□□□□ -1.01
SHS1Q07657 YMR210WYMR210W 1350 nt8.72□□□□□ -1.01
SHS1Q07657 YGL114WYGL114W 2178 nt8.71□□□□□ -1.01
SHS1Q07657 GRH1YDR517W 1119 nt8.71□□□□□ -1.02
SHS1Q07657 LSP1YPL004C 1026 nt8.71□□□□□ -1.02
SHS1Q07657 GGA2YHR108W 1758 nt8.71□□□□□ -1.02
SHS1Q07657 PET18YCR020C 648 nt8.7□□□□□ -1.02
SHS1Q07657 CAK1YFL029C 1107 nt8.67□□□□□ -1.02
SHS1Q07657 RRT14YIL127C 621 nt8.67□□□□□ -1.02
SHS1Q07657 HRA1HRA1 564 nt8.67□□□□□ -1.02
SHS1Q07657 GPM1YKL152C 744 nt8.67□□□□□ -1.02
SHS1Q07657 RIM8YGL045W 1629 nt8.66□□□□□ -1.02
SHS1Q07657 OCH1YGL038C 1443 nt8.66□□□□□ -1.02
SHS1Q07657 YLR460CYLR460C 1131 nt8.66□□□□□ -1.02
SHS1Q07657 MRP1YDR347W 966 nt8.65□□□□□ -1.02
SHS1Q07657 YER156CYER156C 1017 nt8.65□□□□□ -1.02
SHS1Q07657 MET22YOL064C 1074 nt8.65□□□□□ -1.02
SHS1Q07657 LEU4YNL104C 1860 nt8.65□□□□□ -1.02
SHS1Q07657 CHS7YHR142W 951 nt8.64□□□□□ -1.03
SHS1Q07657 YRF1-2YER190W 5046 nt8.64□□□□□ -1.03
SHS1Q07657 RPL12BYDR418W 498 nt8.63□□□□□ -1.03
SHS1Q07657 YDR467CYDR467C 327 nt8.63□□□□□ -1.03
SHS1Q07657 RNA170RNA170 169 nt8.63□□□□□ -1.03
SHS1Q07657 ADA2YDR448W 1305 nt8.62□□□□□ -1.03
SHS1Q07657 tE(CUC)DtE(CUC)D 72 nt8.62□□□□□ -1.03
SHS1Q07657 tE(CUC)ItE(CUC)I 72 nt8.62□□□□□ -1.03
SHS1Q07657 PDC6YGR087C 1692 nt8.62□□□□□ -1.03
SHS1Q07657 YAL016C-AYAL016C-A 315 nt8.61□□□□□ -1.03
SHS1Q07657 AAC3YBR085W 924 nt8.61□□□□□ -1.03
SHS1Q07657 DMA2YNL116W 1569 nt8.61□□□□□ -1.03
SHS1Q07657 BSP1YPR171W 1731 nt8.6□□□□□ -1.03
SHS1Q07657 UTR5YEL035C 501 nt8.6□□□□□ -1.03
SHS1Q07657 YMR209CYMR209C 1374 nt8.6□□□□□ -1.03
SHS1Q07657 GDH1YOR375C 1365 nt8.6□□□□□ -1.03
SHS1Q07657 MFT1YML062C 1179 nt8.59□□□□□ -1.03
SHS1Q07657 TMS1YDR105C 1422 nt8.59□□□□□ -1.03
SHS1Q07657 YIR035CYIR035C 765 nt8.58□□□□□ -1.04
SHS1Q07657 BXI1YNL305C 894 nt8.57□□□□□ -1.04
SHS1Q07657 YBL095WYBL095W 813 nt8.56□□□□□ -1.04
SHS1Q07657 OLA1YBR025C 1185 nt8.56□□□□□ -1.04
SHS1Q07657 HXT10YFL011W 1641 nt8.55□□□□□ -1.04
SHS1Q07657 INH1YDL181W 258 nt8.55□□□□□ -1.04
SHS1Q07657 TAD2YJL035C 753 nt8.55□□□□□ -1.04
SHS1Q07657 YJR149WYJR149W 1215 nt8.55□□□□□ -1.04
SHS1Q07657 RPS6AYPL090C 711 nt8.55□□□□□ -1.04
SHS1Q07657 RPS6BYBR181C 711 nt8.55□□□□□ -1.04
SHS1Q07657 ELP4YPL101W 1371 nt8.54□□□□□ -1.04
SHS1Q07657 tL(UAA)B1tL(UAA)B1 84 nt8.54□□□□□ -1.04
SHS1Q07657 tL(UAA)B2tL(UAA)B2 84 nt8.54□□□□□ -1.04
SHS1Q07657 tL(UAA)DtL(UAA)D 84 nt8.54□□□□□ -1.04
SHS1Q07657 SUP51tL(UAA)J 84 nt8.54□□□□□ -1.04
SHS1Q07657 tL(UAA)KtL(UAA)K 84 nt8.54□□□□□ -1.04
SHS1Q07657 tL(UAA)LtL(UAA)L 84 nt8.54□□□□□ -1.04
SHS1Q07657 tL(UAA)NtL(UAA)N 84 nt8.54□□□□□ -1.04
SHS1Q07657 YHR218WYHR218W 1812 nt8.53□□□□□ -1.04
SHS1Q07657 EDC2YER035W 438 nt8.52□□□□□ -1.05
SHS1Q07657 BUB2YMR055C 921 nt8.52□□□□□ -1.05
SHS1Q07657 ATP2YJR121W 1536 nt8.52□□□□□ -1.05
SHS1Q07657 AGP3YFL055W 1677 nt8.52□□□□□ -1.05
SHS1Q07657 YPR084WYPR084W 1371 nt8.51□□□□□ -1.05
SHS1Q07657 NPP2YEL016C 1482 nt8.51□□□□□ -1.05
SHS1Q07657 YBR056WYBR056W 1506 nt8.5□□□□□ -1.05
SHS1Q07657 YMC2YBR104W 990 nt8.5□□□□□ -1.05
SHS1Q07657 MRS4YKR052C 915 nt8.49□□□□□ -1.05
SHS1Q07657 RHO1YPR165W 630 nt8.48□□□□□ -1.05
SHS1Q07657 YRF1-3YGR296W 5580 nt8.47□□□□□ -1.05
SHS1Q07657 YRF1-6YNL339C 5580 nt8.47□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms