Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 tA(UGC)OtA(UGC)O 73 nt8.63□□□□□ -1.03
HRD3Q05787 SAN1YDR143C 1833 nt8.63□□□□□ -1.03
HRD3Q05787 HIS2YFR025C 1008 nt8.62□□□□□ -1.03
HRD3Q05787 YLR280CYLR280C 351 nt8.62□□□□□ -1.03
HRD3Q05787 ERO1YML130C 1692 nt8.62□□□□□ -1.03
HRD3Q05787 YMR007WYMR007W 381 nt8.61□□□□□ -1.03
HRD3Q05787 RIM2YBR192W 1134 nt8.61□□□□□ -1.03
HRD3Q05787 RIM8YGL045W 1629 nt8.6□□□□□ -1.03
HRD3Q05787 KGD2YDR148C 1392 nt8.6□□□□□ -1.03
HRD3Q05787 YGR210CYGR210C 1236 nt8.59□□□□□ -1.03
HRD3Q05787 SSL2YIL143C 2532 nt8.58□□□□□ -1.04
HRD3Q05787 POP2YNR052C 1302 nt8.57□□□□□ -1.04
HRD3Q05787 YER152W-AYER152W-A 567 nt8.56□□□□□ -1.04
HRD3Q05787 YPT11YNL304W 1254 nt8.56□□□□□ -1.04
HRD3Q05787 FCY1YPR062W 477 nt8.56□□□□□ -1.04
HRD3Q05787 CWP2YKL096W-A 279 nt8.55□□□□□ -1.04
HRD3Q05787 YFR020WYFR020W 699 nt8.54□□□□□ -1.04
HRD3Q05787 RCR1YBR005W 642 nt8.54□□□□□ -1.04
HRD3Q05787 RPC31YNL151C 756 nt8.53□□□□□ -1.04
HRD3Q05787 ODC1YPL134C 933 nt8.53□□□□□ -1.04
HRD3Q05787 YGL114WYGL114W 2178 nt8.53□□□□□ -1.04
HRD3Q05787 SBP1YHL034C 885 nt8.52□□□□□ -1.05
HRD3Q05787 YPL108WYPL108W 507 nt8.52□□□□□ -1.05
HRD3Q05787 GAS1YMR307W 1680 nt8.52□□□□□ -1.05
HRD3Q05787 PTC6YCR079W 1329 nt8.51□□□□□ -1.05
HRD3Q05787 KRR1YCL059C 951 nt8.5□□□□□ -1.05
HRD3Q05787 DPL1YDR294C 1770 nt8.48□□□□□ -1.05
HRD3Q05787 YJL160CYJL160C 864 nt8.47□□□□□ -1.05
HRD3Q05787 RSM7YJR113C 744 nt8.47□□□□□ -1.05
HRD3Q05787 BUD20YLR074C 501 nt8.44□□□□□ -1.06
HRD3Q05787 YMR166CYMR166C 1107 nt8.43□□□□□ -1.06
HRD3Q05787 MDM35YKL053C-A 261 nt8.42□□□□□ -1.06
HRD3Q05787 EMC3YKL207W 762 nt8.42□□□□□ -1.06
HRD3Q05787 LSP1YPL004C 1026 nt8.42□□□□□ -1.06
HRD3Q05787 THI3YDL080C 1830 nt8.41□□□□□ -1.06
HRD3Q05787 YMR316C-BYMR316C-B 309 nt8.41□□□□□ -1.06
HRD3Q05787 GGA2YHR108W 1758 nt8.4□□□□□ -1.06
HRD3Q05787 YMR210WYMR210W 1350 nt8.4□□□□□ -1.06
HRD3Q05787 PET18YCR020C 648 nt8.4□□□□□ -1.06
HRD3Q05787 PAU21YOR394W 495 nt8.4□□□□□ -1.06
HRD3Q05787 PAU22YPL282C 495 nt8.4□□□□□ -1.06
HRD3Q05787 MAE1YKL029C 2010 nt8.39□□□□□ -1.07
HRD3Q05787 GRH1YDR517W 1119 nt8.39□□□□□ -1.07
HRD3Q05787 GPM1YKL152C 744 nt8.38□□□□□ -1.07
HRD3Q05787 SFP1YLR403W 2052 nt8.38□□□□□ -1.07
HRD3Q05787 LEU4YNL104C 1860 nt8.37□□□□□ -1.07
HRD3Q05787 BSP1YPR171W 1731 nt8.37□□□□□ -1.07
HRD3Q05787 YMR209CYMR209C 1374 nt8.36□□□□□ -1.07
HRD3Q05787 YDR467CYDR467C 327 nt8.36□□□□□ -1.07
HRD3Q05787 CAK1YFL029C 1107 nt8.36□□□□□ -1.07
HRD3Q05787 YLR460CYLR460C 1131 nt8.36□□□□□ -1.07
HRD3Q05787 YOR343CYOR343C 327 nt8.36□□□□□ -1.07
HRD3Q05787 GID7YCL039W 2238 nt8.35□□□□□ -1.07
HRD3Q05787 MET2YNL277W 1461 nt8.35□□□□□ -1.07
HRD3Q05787 OCH1YGL038C 1443 nt8.35□□□□□ -1.07
HRD3Q05787 MET22YOL064C 1074 nt8.34□□□□□ -1.07
HRD3Q05787 CHS7YHR142W 951 nt8.33□□□□□ -1.08
HRD3Q05787 RRT14YIL127C 621 nt8.33□□□□□ -1.08
HRD3Q05787 HRA1HRA1 564 nt8.33□□□□□ -1.08
HRD3Q05787 DMA2YNL116W 1569 nt8.32□□□□□ -1.08
HRD3Q05787 tE(CUC)DtE(CUC)D 72 nt8.31□□□□□ -1.08
HRD3Q05787 tE(CUC)ItE(CUC)I 72 nt8.31□□□□□ -1.08
HRD3Q05787 UTR5YEL035C 501 nt8.31□□□□□ -1.08
HRD3Q05787 YGR139WYGR139W 339 nt8.3□□□□□ -1.08
HRD3Q05787 RNA170RNA170 169 nt8.3□□□□□ -1.08
HRD3Q05787 MRP1YDR347W 966 nt8.29□□□□□ -1.08
HRD3Q05787 YER156CYER156C 1017 nt8.29□□□□□ -1.08
HRD3Q05787 AAC3YBR085W 924 nt8.29□□□□□ -1.08
HRD3Q05787 PDC6YGR087C 1692 nt8.29□□□□□ -1.08
HRD3Q05787 HXT10YFL011W 1641 nt8.29□□□□□ -1.08
HRD3Q05787 ADA2YDR448W 1305 nt8.29□□□□□ -1.08
HRD3Q05787 YBL095WYBL095W 813 nt8.28□□□□□ -1.08
HRD3Q05787 NPP1YCR026C 2229 nt8.27□□□□□ -1.08
HRD3Q05787 RPL12BYDR418W 498 nt8.27□□□□□ -1.09
HRD3Q05787 YAL016C-AYAL016C-A 315 nt8.27□□□□□ -1.09
HRD3Q05787 MFT1YML062C 1179 nt8.27□□□□□ -1.09
HRD3Q05787 OLA1YBR025C 1185 nt8.27□□□□□ -1.09
HRD3Q05787 RPS6AYPL090C 711 nt8.27□□□□□ -1.09
HRD3Q05787 RPS6BYBR181C 711 nt8.27□□□□□ -1.09
HRD3Q05787 TMS1YDR105C 1422 nt8.27□□□□□ -1.09
HRD3Q05787 ESBP6YNL125C 2022 nt8.26□□□□□ -1.09
HRD3Q05787 INH1YDL181W 258 nt8.26□□□□□ -1.09
HRD3Q05787 YIR035CYIR035C 765 nt8.26□□□□□ -1.09
HRD3Q05787 YJR149WYJR149W 1215 nt8.26□□□□□ -1.09
HRD3Q05787 BXI1YNL305C 894 nt8.26□□□□□ -1.09
HRD3Q05787 GDH1YOR375C 1365 nt8.25□□□□□ -1.09
HRD3Q05787 YMC2YBR104W 990 nt8.25□□□□□ -1.09
HRD3Q05787 tL(UAA)B1tL(UAA)B1 84 nt8.23□□□□□ -1.09
HRD3Q05787 tL(UAA)B2tL(UAA)B2 84 nt8.23□□□□□ -1.09
HRD3Q05787 tL(UAA)DtL(UAA)D 84 nt8.23□□□□□ -1.09
HRD3Q05787 SUP51tL(UAA)J 84 nt8.23□□□□□ -1.09
HRD3Q05787 tL(UAA)KtL(UAA)K 84 nt8.23□□□□□ -1.09
HRD3Q05787 tL(UAA)LtL(UAA)L 84 nt8.23□□□□□ -1.09
HRD3Q05787 tL(UAA)NtL(UAA)N 84 nt8.23□□□□□ -1.09
HRD3Q05787 MRS4YKR052C 915 nt8.23□□□□□ -1.09
HRD3Q05787 NPP2YEL016C 1482 nt8.23□□□□□ -1.09
HRD3Q05787 ELP4YPL101W 1371 nt8.22□□□□□ -1.09
HRD3Q05787 AGP3YFL055W 1677 nt8.22□□□□□ -1.09
HRD3Q05787 BUB2YMR055C 921 nt8.22□□□□□ -1.09
HRD3Q05787 YHR218WYHR218W 1812 nt8.22□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms