Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 SNX3YOR357C 489 nt8.37□□□□□ -1.07
SSL1Q04673 ODC1YPL134C 933 nt8.37□□□□□ -1.07
SSL1Q04673 THP3YPR045C 1413 nt8.37□□□□□ -1.07
SSL1Q04673 PAM17YKR065C 594 nt8.36□□□□□ -1.07
SSL1Q04673 MET1YKR069W 1782 nt8.35□□□□□ -1.07
SSL1Q04673 RPN14YGL004C 1254 nt8.35□□□□□ -1.07
SSL1Q04673 KRE1YNL322C 942 nt8.35□□□□□ -1.07
SSL1Q04673 SPE2YOL052C 1191 nt8.35□□□□□ -1.07
SSL1Q04673 snR31snR31 225 nt8.35□□□□□ -1.07
SSL1Q04673 BUD20YLR074C 501 nt8.34□□□□□ -1.07
SSL1Q04673 CRC1YOR100C 984 nt8.34□□□□□ -1.07
SSL1Q04673 LEU2YCL018W 1095 nt8.34□□□□□ -1.07
SSL1Q04673 YDR306CYDR306C 1437 nt8.34□□□□□ -1.07
SSL1Q04673 FSH2YMR222C 672 nt8.33□□□□□ -1.08
SSL1Q04673 KRR1YCL059C 951 nt8.32□□□□□ -1.08
SSL1Q04673 FTH1YBR207W 1398 nt8.31□□□□□ -1.08
SSL1Q04673 NAM8YHR086W 1572 nt8.31□□□□□ -1.08
SSL1Q04673 YKL053WYKL053W 375 nt8.3□□□□□ -1.08
SSL1Q04673 RPC31YNL151C 756 nt8.3□□□□□ -1.08
SSL1Q04673 YMR209CYMR209C 1374 nt8.29□□□□□ -1.08
SSL1Q04673 MDM35YKL053C-A 261 nt8.28□□□□□ -1.08
SSL1Q04673 RIM2YBR192W 1134 nt8.28□□□□□ -1.08
SSL1Q04673 tA(AGC)DtA(AGC)D 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)FtA(AGC)F 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)GtA(AGC)G 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)HtA(AGC)H 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)JtA(AGC)J 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)K1tA(AGC)K1 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)K2tA(AGC)K2 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)LtA(AGC)L 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)M1tA(AGC)M1 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)M2tA(AGC)M2 73 nt8.27□□□□□ -1.09
SSL1Q04673 tA(AGC)PtA(AGC)P 73 nt8.27□□□□□ -1.09
SSL1Q04673 PHB2YGR231C 933 nt8.27□□□□□ -1.09
SSL1Q04673 DPL1YDR294C 1770 nt8.26□□□□□ -1.09
SSL1Q04673 ADH3YMR083W 1128 nt8.26□□□□□ -1.09
SSL1Q04673 SAN1YDR143C 1833 nt8.26□□□□□ -1.09
SSL1Q04673 NAS6YGR232W 687 nt8.25□□□□□ -1.09
SSL1Q04673 REX2YLR059C 810 nt8.25□□□□□ -1.09
SSL1Q04673 IPL1YPL209C 1104 nt8.25□□□□□ -1.09
SSL1Q04673 KGD2YDR148C 1392 nt8.24□□□□□ -1.09
SSL1Q04673 TOS1YBR162C 1368 nt8.24□□□□□ -1.09
SSL1Q04673 DMA2YNL116W 1569 nt8.24□□□□□ -1.09
SSL1Q04673 FLX1YIL134W 936 nt8.24□□□□□ -1.09
SSL1Q04673 YKR012CYKR012C 378 nt8.24□□□□□ -1.09
SSL1Q04673 SRP54YPR088C 1626 nt8.24□□□□□ -1.09
SSL1Q04673 SDS24YBR214W 1584 nt8.22□□□□□ -1.09
SSL1Q04673 ACO2YJL200C 2370 nt8.22□□□□□ -1.09
SSL1Q04673 YRF1-2YER190W 5046 nt8.22□□□□□ -1.09
SSL1Q04673 GNP1YDR508C 1992 nt8.22□□□□□ -1.09
SSL1Q04673 YCP4YCR004C 744 nt8.21□□□□□ -1.1
SSL1Q04673 YTH1YPR107C 627 nt8.21□□□□□ -1.1
SSL1Q04673 MOB1YIL106W 945 nt8.2□□□□□ -1.1
SSL1Q04673 VBA3YCL069W 1377 nt8.19□□□□□ -1.1
SSL1Q04673 YNL067W-AYNL067W-A 147 nt8.18□□□□□ -1.1
SSL1Q04673 YCR025CYCR025C 411 nt8.17□□□□□ -1.1
SSL1Q04673 SBP1YHL034C 885 nt8.17□□□□□ -1.1
SSL1Q04673 FAF1YIL019W 1041 nt8.17□□□□□ -1.1
SSL1Q04673 YLR173WYLR173W 1827 nt8.17□□□□□ -1.1
SSL1Q04673 YPT11YNL304W 1254 nt8.16□□□□□ -1.1
SSL1Q04673 LEU4YNL104C 1860 nt8.15□□□□□ -1.1
SSL1Q04673 YHR218WYHR218W 1812 nt8.15□□□□□ -1.1
SSL1Q04673 ENO1YGR254W 1314 nt8.15□□□□□ -1.1
SSL1Q04673 CYT1YOR065W 930 nt8.15□□□□□ -1.1
SSL1Q04673 PUS7YOR243C 2031 nt8.15□□□□□ -1.11
SSL1Q04673 HXT10YFL011W 1641 nt8.14□□□□□ -1.11
SSL1Q04673 SAM50YNL026W 1455 nt8.14□□□□□ -1.11
SSL1Q04673 CYC3YAL039C 810 nt8.14□□□□□ -1.11
SSL1Q04673 GAS1YMR307W 1680 nt8.14□□□□□ -1.11
SSL1Q04673 PSD1YNL169C 1503 nt8.13□□□□□ -1.11
SSL1Q04673 NSG2YNL156C 900 nt8.13□□□□□ -1.11
SSL1Q04673 THI3YDL080C 1830 nt8.13□□□□□ -1.11
SSL1Q04673 PTC6YCR079W 1329 nt8.12□□□□□ -1.11
SSL1Q04673 YDR467CYDR467C 327 nt8.12□□□□□ -1.11
SSL1Q04673 PUS5YLR165C 765 nt8.12□□□□□ -1.11
SSL1Q04673 YHM2YMR241W 945 nt8.12□□□□□ -1.11
SSL1Q04673 YMR316C-BYMR316C-B 309 nt8.12□□□□□ -1.11
SSL1Q04673 RPL12BYDR418W 498 nt8.11□□□□□ -1.11
SSL1Q04673 GPM1YKL152C 744 nt8.11□□□□□ -1.11
SSL1Q04673 SRP102YKL154W 735 nt8.11□□□□□ -1.11
SSL1Q04673 GGA2YHR108W 1758 nt8.11□□□□□ -1.11
SSL1Q04673 MFG1YDL233W 1377 nt8.1□□□□□ -1.11
SSL1Q04673 LYS20YDL182W 1287 nt8.1□□□□□ -1.11
SSL1Q04673 tE(CUC)DtE(CUC)D 72 nt8.1□□□□□ -1.11
SSL1Q04673 tE(CUC)ItE(CUC)I 72 nt8.1□□□□□ -1.11
SSL1Q04673 BUR6YER159C 429 nt8.1□□□□□ -1.11
SSL1Q04673 AGP3YFL055W 1677 nt8.09□□□□□ -1.11
SSL1Q04673 INH1YDL181W 258 nt8.09□□□□□ -1.11
SSL1Q04673 YFR020WYFR020W 699 nt8.09□□□□□ -1.11
SSL1Q04673 SER2YGR208W 930 nt8.09□□□□□ -1.11
SSL1Q04673 FHN1YGR131W 525 nt8.08□□□□□ -1.12
SSL1Q04673 YOR268CYOR268C 399 nt8.08□□□□□ -1.12
SSL1Q04673 SWM1YDR260C 513 nt8.07□□□□□ -1.12
SSL1Q04673 YLR280CYLR280C 351 nt8.07□□□□□ -1.12
SSL1Q04673 TOM71YHR117W 1920 nt8.07□□□□□ -1.12
SSL1Q04673 HOG1YLR113W 1308 nt8.06□□□□□ -1.12
SSL1Q04673 ERO1YML130C 1692 nt8.06□□□□□ -1.12
SSL1Q04673 BNS1YGR230W 414 nt8.06□□□□□ -1.12
SSL1Q04673 HTS1YPR033C 1641 nt8.06□□□□□ -1.12
SSL1Q04673 RSM7YJR113C 744 nt8.05□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 63.5 ms