Protein–RNA interactions for Protein: P47082

AVT1, Vacuolar amino acid transporter 1, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT1P47082 SAN1YDR143C 1833 nt9.09□□□□□ -0.95
AVT1P47082 HTS1YPR033C 1641 nt9.09□□□□□ -0.95
AVT1P47082 SRP54YPR088C 1626 nt9.09□□□□□ -0.95
AVT1P47082 ENO1YGR254W 1314 nt9.07□□□□□ -0.96
AVT1P47082 TGA1tA(UGC)A 73 nt9.07□□□□□ -0.96
AVT1P47082 tA(UGC)EtA(UGC)E 73 nt9.07□□□□□ -0.96
AVT1P47082 tA(UGC)GtA(UGC)G 73 nt9.07□□□□□ -0.96
AVT1P47082 tA(UGC)LtA(UGC)L 73 nt9.07□□□□□ -0.96
AVT1P47082 tA(UGC)OtA(UGC)O 73 nt9.07□□□□□ -0.96
AVT1P47082 RPN14YGL004C 1254 nt9.07□□□□□ -0.96
AVT1P47082 RIM2YBR192W 1134 nt9.07□□□□□ -0.96
AVT1P47082 ERO1YML130C 1692 nt9.07□□□□□ -0.96
AVT1P47082 RPD3YNL330C 1302 nt9.05□□□□□ -0.96
AVT1P47082 SSL2YIL143C 2532 nt9.05□□□□□ -0.96
AVT1P47082 HSL7YBR133C 2484 nt9.05□□□□□ -0.96
AVT1P47082 YER152W-AYER152W-A 567 nt9.05□□□□□ -0.96
AVT1P47082 YLR280CYLR280C 351 nt9.05□□□□□ -0.96
AVT1P47082 YMR007WYMR007W 381 nt9.05□□□□□ -0.96
AVT1P47082 POP2YNR052C 1302 nt9.05□□□□□ -0.96
AVT1P47082 KGD2YDR148C 1392 nt9.04□□□□□ -0.96
AVT1P47082 YGR210CYGR210C 1236 nt9.04□□□□□ -0.96
AVT1P47082 HIS2YFR025C 1008 nt9.01□□□□□ -0.97
AVT1P47082 SEM1YDR363W-A 270 nt9□□□□□ -0.97
AVT1P47082 CWP2YKL096W-A 279 nt9□□□□□ -0.97
AVT1P47082 Q0010Q0010 387 nt9□□□□□ -0.97
AVT1P47082 YFR020WYFR020W 699 nt8.99□□□□□ -0.97
AVT1P47082 FCY1YPR062W 477 nt8.98□□□□□ -0.97
AVT1P47082 YPT11YNL304W 1254 nt8.97□□□□□ -0.97
AVT1P47082 YPL108WYPL108W 507 nt8.97□□□□□ -0.97
AVT1P47082 ODC1YPL134C 933 nt8.96□□□□□ -0.98
AVT1P47082 DPL1YDR294C 1770 nt8.96□□□□□ -0.98
AVT1P47082 RPC31YNL151C 756 nt8.95□□□□□ -0.98
AVT1P47082 GAS1YMR307W 1680 nt8.94□□□□□ -0.98
AVT1P47082 YJL160CYJL160C 864 nt8.94□□□□□ -0.98
AVT1P47082 RCR1YBR005W 642 nt8.94□□□□□ -0.98
AVT1P47082 PTC6YCR079W 1329 nt8.94□□□□□ -0.98
AVT1P47082 SBP1YHL034C 885 nt8.93□□□□□ -0.98
AVT1P47082 YIR018C-AYIR018C-A 138 nt8.91□□□□□ -0.98
AVT1P47082 BUD20YLR074C 501 nt8.9□□□□□ -0.98
AVT1P47082 SRN2YLR119W 642 nt8.9□□□□□ -0.98
AVT1P47082 KRR1YCL059C 951 nt8.89□□□□□ -0.99
AVT1P47082 PET18YCR020C 648 nt8.88□□□□□ -0.99
AVT1P47082 EMC3YKL207W 762 nt8.88□□□□□ -0.99
AVT1P47082 THI3YDL080C 1830 nt8.87□□□□□ -0.99
AVT1P47082 YMR316C-BYMR316C-B 309 nt8.87□□□□□ -0.99
AVT1P47082 RSM7YJR113C 744 nt8.86□□□□□ -0.99
AVT1P47082 YMR166CYMR166C 1107 nt8.86□□□□□ -0.99
AVT1P47082 YMR210WYMR210W 1350 nt8.86□□□□□ -0.99
AVT1P47082 LSP1YPL004C 1026 nt8.85□□□□□ -0.99
AVT1P47082 GRH1YDR517W 1119 nt8.84□□□□□ -0.99
AVT1P47082 YGL114WYGL114W 2178 nt8.84□□□□□ -0.99
AVT1P47082 RIM8YGL045W 1629 nt8.83□□□□□ -1
AVT1P47082 MDM35YKL053C-A 261 nt8.83□□□□□ -1
AVT1P47082 YOR343CYOR343C 327 nt8.83□□□□□ -1
AVT1P47082 GGA2YHR108W 1758 nt8.82□□□□□ -1
AVT1P47082 Q0142Q0142 177 nt8.82□□□□□ -1
AVT1P47082 LEU4YNL104C 1860 nt8.81□□□□□ -1
AVT1P47082 CAK1YFL029C 1107 nt8.79□□□□□ -1
AVT1P47082 GPM1YKL152C 744 nt8.79□□□□□ -1
AVT1P47082 MET22YOL064C 1074 nt8.79□□□□□ -1
AVT1P47082 UTR5YEL035C 501 nt8.78□□□□□ -1
AVT1P47082 ARA2YMR041C 1008 nt8.78□□□□□ -1
AVT1P47082 OCH1YGL038C 1443 nt8.78□□□□□ -1
AVT1P47082 YMR209CYMR209C 1374 nt8.77□□□□□ -1.01
AVT1P47082 HRA1HRA1 564 nt8.77□□□□□ -1.01
AVT1P47082 RNA170RNA170 169 nt8.77□□□□□ -1.01
AVT1P47082 YDR467CYDR467C 327 nt8.75□□□□□ -1.01
AVT1P47082 YER156CYER156C 1017 nt8.75□□□□□ -1.01
AVT1P47082 RRT14YIL127C 621 nt8.75□□□□□ -1.01
AVT1P47082 YLR460CYLR460C 1131 nt8.75□□□□□ -1.01
AVT1P47082 ADA2YDR448W 1305 nt8.75□□□□□ -1.01
AVT1P47082 tE(CUC)DtE(CUC)D 72 nt8.74□□□□□ -1.01
AVT1P47082 tE(CUC)ItE(CUC)I 72 nt8.74□□□□□ -1.01
AVT1P47082 PDC6YGR087C 1692 nt8.74□□□□□ -1.01
AVT1P47082 ARP10YDR106W 855 nt8.73□□□□□ -1.01
AVT1P47082 MRP1YDR347W 966 nt8.73□□□□□ -1.01
AVT1P47082 YJR149WYJR149W 1215 nt8.73□□□□□ -1.01
AVT1P47082 Q0017Q0017 162 nt8.73□□□□□ -1.01
AVT1P47082 DMA2YNL116W 1569 nt8.73□□□□□ -1.01
AVT1P47082 CHS7YHR142W 951 nt8.72□□□□□ -1.01
AVT1P47082 YAL016C-AYAL016C-A 315 nt8.72□□□□□ -1.01
AVT1P47082 AAC3YBR085W 924 nt8.72□□□□□ -1.01
AVT1P47082 AI5_BETAQ0075 1065 nt8.71□□□□□ -1.02
AVT1P47082 RPL12BYDR418W 498 nt8.71□□□□□ -1.02
AVT1P47082 HXT10YFL011W 1641 nt8.7□□□□□ -1.02
AVT1P47082 tL(UAA)B1tL(UAA)B1 84 nt8.7□□□□□ -1.02
AVT1P47082 tL(UAA)B2tL(UAA)B2 84 nt8.7□□□□□ -1.02
AVT1P47082 tL(UAA)DtL(UAA)D 84 nt8.7□□□□□ -1.02
AVT1P47082 SUP51tL(UAA)J 84 nt8.7□□□□□ -1.02
AVT1P47082 tL(UAA)KtL(UAA)K 84 nt8.7□□□□□ -1.02
AVT1P47082 tL(UAA)LtL(UAA)L 84 nt8.7□□□□□ -1.02
AVT1P47082 tL(UAA)NtL(UAA)N 84 nt8.7□□□□□ -1.02
AVT1P47082 BXI1YNL305C 894 nt8.7□□□□□ -1.02
AVT1P47082 RPS6AYPL090C 711 nt8.7□□□□□ -1.02
AVT1P47082 RPS6BYBR181C 711 nt8.7□□□□□ -1.02
AVT1P47082 GDH1YOR375C 1365 nt8.69□□□□□ -1.02
AVT1P47082 TMS1YDR105C 1422 nt8.69□□□□□ -1.02
AVT1P47082 MFT1YML062C 1179 nt8.68□□□□□ -1.02
AVT1P47082 YBL095WYBL095W 813 nt8.68□□□□□ -1.02
AVT1P47082 ELP4YPL101W 1371 nt8.67□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 64 ms