Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 RPT5YOR117W 1305 nt8.85□□□□□ -0.99
DEF1P35732 CPD1YGR247W 720 nt8.85□□□□□ -0.99
DEF1P35732 NUC1YJL208C 990 nt8.85□□□□□ -0.99
DEF1P35732 CWP2YKL096W-A 279 nt8.85□□□□□ -0.99
DEF1P35732 AQR1YNL065W 1761 nt8.85□□□□□ -0.99
DEF1P35732 NMD5YJR132W 3147 nt8.85□□□□□ -0.99
DEF1P35732 GAL3YDR009W 1563 nt8.85□□□□□ -0.99
DEF1P35732 PAU15YIR041W 375 nt8.84□□□□□ -0.99
DEF1P35732 GID8YMR135C 1368 nt8.84□□□□□ -0.99
DEF1P35732 ADE17YMR120C 1779 nt8.84□□□□□ -1
DEF1P35732 ECM27YJR106W 2178 nt8.83□□□□□ -1
DEF1P35732 SPE4YLR146C 903 nt8.83□□□□□ -1
DEF1P35732 GPN2YOR262W 1044 nt8.83□□□□□ -1
DEF1P35732 CCT5YJR064W 1689 nt8.83□□□□□ -1
DEF1P35732 PRP2YNR011C 2631 nt8.83□□□□□ -1
DEF1P35732 MRS6YOR370C 1812 nt8.82□□□□□ -1
DEF1P35732 FUB1YCR076C 753 nt8.82□□□□□ -1
DEF1P35732 PAU21YOR394W 495 nt8.82□□□□□ -1
DEF1P35732 PAU22YPL282C 495 nt8.82□□□□□ -1
DEF1P35732 YER188WYER188W 720 nt8.81□□□□□ -1
DEF1P35732 RIB7YBR153W 735 nt8.81□□□□□ -1
DEF1P35732 EDC3YEL015W 1656 nt8.81□□□□□ -1
DEF1P35732 ASN2YGR124W 1719 nt8.8□□□□□ -1
DEF1P35732 YBL111CYBL111C 2004 nt8.8□□□□□ -1
DEF1P35732 DLD2YDL178W 1593 nt8.79□□□□□ -1
DEF1P35732 ACO1YLR304C 2337 nt8.79□□□□□ -1
DEF1P35732 YKL133CYKL133C 1392 nt8.78□□□□□ -1
DEF1P35732 MDH2YOL126C 1134 nt8.78□□□□□ -1
DEF1P35732 YOS9YDR057W 1629 nt8.78□□□□□ -1
DEF1P35732 YPS3YLR121C 1527 nt8.77□□□□□ -1.01
DEF1P35732 FMS1YMR020W 1527 nt8.77□□□□□ -1.01
DEF1P35732 ARO7YPR060C 771 nt8.76□□□□□ -1.01
DEF1P35732 DAL7YIR031C 1665 nt8.75□□□□□ -1.01
DEF1P35732 OYE2YHR179W 1203 nt8.75□□□□□ -1.01
DEF1P35732 RAS2YNL098C 969 nt8.75□□□□□ -1.01
DEF1P35732 DIG1YPL049C 1359 nt8.74□□□□□ -1.01
DEF1P35732 ICL2YPR006C 1728 nt8.74□□□□□ -1.01
DEF1P35732 EAF3YPR023C 1206 nt8.74□□□□□ -1.01
DEF1P35732 SAM50YNL026W 1455 nt8.74□□□□□ -1.01
DEF1P35732 TPS1YBR126C 1488 nt8.73□□□□□ -1.01
DEF1P35732 ESS1YJR017C 513 nt8.73□□□□□ -1.01
DEF1P35732 VTS1YOR359W 1572 nt8.72□□□□□ -1.01
DEF1P35732 YEN1YER041W 2280 nt8.71□□□□□ -1.01
DEF1P35732 AGP2YBR132C 1791 nt8.71□□□□□ -1.01
DEF1P35732 ACH1YBL015W 1581 nt8.71□□□□□ -1.02
DEF1P35732 HEM13YDR044W 987 nt8.71□□□□□ -1.02
DEF1P35732 YIP4YGL198W 708 nt8.71□□□□□ -1.02
DEF1P35732 SNZ1YMR096W 894 nt8.71□□□□□ -1.02
DEF1P35732 CIR2YOR356W 1896 nt8.7□□□□□ -1.02
DEF1P35732 SPP2YOR148C 558 nt8.7□□□□□ -1.02
DEF1P35732 OSH7YHR001W 1314 nt8.7□□□□□ -1.02
DEF1P35732 NDE2YDL085W 1638 nt8.69□□□□□ -1.02
DEF1P35732 SGE1YPR198W 1632 nt8.69□□□□□ -1.02
DEF1P35732 POB3YML069W 1659 nt8.69□□□□□ -1.02
DEF1P35732 YPR126CYPR126C 309 nt8.69□□□□□ -1.02
DEF1P35732 tS(GCU)LtS(GCU)L 80 nt8.68□□□□□ -1.02
DEF1P35732 INH1YDL181W 258 nt8.67□□□□□ -1.02
DEF1P35732 DIA4YHR011W 1341 nt8.67□□□□□ -1.02
DEF1P35732 TAF13YML098W 504 nt8.66□□□□□ -1.02
DEF1P35732 TMA23YMR269W 636 nt8.66□□□□□ -1.02
DEF1P35732 TIM44YIL022W 1296 nt8.65□□□□□ -1.02
DEF1P35732 YMR262WYMR262W 942 nt8.65□□□□□ -1.02
DEF1P35732 MHF1YOL086W-A 273 nt8.65□□□□□ -1.02
DEF1P35732 PGC1YPL206C 966 nt8.65□□□□□ -1.02
DEF1P35732 SOL2YCR073W-A 948 nt8.64□□□□□ -1.03
DEF1P35732 TRR1YDR353W 960 nt8.64□□□□□ -1.03
DEF1P35732 PMT7YDR307W 1989 nt8.63□□□□□ -1.03
DEF1P35732 APT1YML022W 564 nt8.62□□□□□ -1.03
DEF1P35732 YPL264CYPL264C 1062 nt8.62□□□□□ -1.03
DEF1P35732 YBR232CYBR232C 360 nt8.62□□□□□ -1.03
DEF1P35732 TAT2YOL020W 1779 nt8.62□□□□□ -1.03
DEF1P35732 CTI6YPL181W 1521 nt8.61□□□□□ -1.03
DEF1P35732 HXT11YOL156W 1704 nt8.61□□□□□ -1.03
DEF1P35732 YDL086WYDL086W 822 nt8.61□□□□□ -1.03
DEF1P35732 PAU5YFL020C 369 nt8.61□□□□□ -1.03
DEF1P35732 STP3YLR375W 1032 nt8.61□□□□□ -1.03
DEF1P35732 IML3YBR107C 738 nt8.61□□□□□ -1.03
DEF1P35732 YHR219WYHR219W 1875 nt8.61□□□□□ -1.03
DEF1P35732 RPD3YNL330C 1302 nt8.6□□□□□ -1.03
DEF1P35732 DDI1YER143W 1287 nt8.6□□□□□ -1.03
DEF1P35732 IMO32YGR031W 1029 nt8.6□□□□□ -1.03
DEF1P35732 GSF2YML048W 1212 nt8.59□□□□□ -1.03
DEF1P35732 YDR455CYDR455C 309 nt8.58□□□□□ -1.04
DEF1P35732 POT1YIL160C 1254 nt8.58□□□□□ -1.04
DEF1P35732 RCF2YNR018W 675 nt8.58□□□□□ -1.04
DEF1P35732 RRT8YOL048C 1029 nt8.58□□□□□ -1.04
DEF1P35732 ERG12YMR208W 1332 nt8.56□□□□□ -1.04
DEF1P35732 TRP2YER090W 1524 nt8.55□□□□□ -1.04
DEF1P35732 ASP3-1YLR155C 1089 nt8.55□□□□□ -1.04
DEF1P35732 ASP3-2YLR157C 1089 nt8.55□□□□□ -1.04
DEF1P35732 ASP3-3YLR158C 1089 nt8.55□□□□□ -1.04
DEF1P35732 ASP3-4YLR160C 1089 nt8.55□□□□□ -1.04
DEF1P35732 SEN2YLR105C 1134 nt8.54□□□□□ -1.04
DEF1P35732 YIL177CYIL177C 5277 nt8.54□□□□□ -1.04
DEF1P35732 DAL4YIR028W 1908 nt8.54□□□□□ -1.04
DEF1P35732 TUB4YLR212C 1422 nt8.54□□□□□ -1.04
DEF1P35732 SSC1YJR045C 1965 nt8.53□□□□□ -1.04
DEF1P35732 NAP1YKR048C 1254 nt8.52□□□□□ -1.05
DEF1P35732 SRM1YGL097W 1449 nt8.52□□□□□ -1.05
DEF1P35732 HXT9YJL219W 1704 nt8.51□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms