Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 FIT1YDR534C 1587 nt7.83□□□□□ -1.16
PRP28P23394 LPD1YFL018C 1500 nt7.83□□□□□ -1.16
PRP28P23394 DPL1YDR294C 1770 nt7.82□□□□□ -1.16
PRP28P23394 STE4YOR212W 1272 nt7.82□□□□□ -1.16
PRP28P23394 snR31snR31 225 nt7.82□□□□□ -1.16
PRP28P23394 STF1YDL130W-A 261 nt7.81□□□□□ -1.16
PRP28P23394 LCP5YER127W 1074 nt7.81□□□□□ -1.16
PRP28P23394 ABZ2YMR289W 1125 nt7.81□□□□□ -1.16
PRP28P23394 MIM1YOL026C 342 nt7.81□□□□□ -1.16
PRP28P23394 YPL041CYPL041C 624 nt7.81□□□□□ -1.16
PRP28P23394 ECM27YJR106W 2178 nt7.8□□□□□ -1.16
PRP28P23394 COG1YGL223C 1254 nt7.8□□□□□ -1.16
PRP28P23394 POT1YIL160C 1254 nt7.8□□□□□ -1.16
PRP28P23394 ECM10YEL030W 1935 nt7.8□□□□□ -1.16
PRP28P23394 SUV3YPL029W 2214 nt7.79□□□□□ -1.16
PRP28P23394 ADE5,7YGL234W 2409 nt7.79□□□□□ -1.16
PRP28P23394 URH1YDR400W 1023 nt7.79□□□□□ -1.16
PRP28P23394 SWT21YNL187W 1074 nt7.79□□□□□ -1.16
PRP28P23394 LEU4YNL104C 1860 nt7.79□□□□□ -1.16
PRP28P23394 HBS1YKR084C 1836 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)BtD(GUC)B 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)DtD(GUC)D 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)G1tD(GUC)G1 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)G2tD(GUC)G2 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)I1tD(GUC)I1 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)I2tD(GUC)I2 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)J1tD(GUC)J1 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)J2tD(GUC)J2 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)J3tD(GUC)J3 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)J4tD(GUC)J4 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)KtD(GUC)K 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)L1tD(GUC)L1 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)L2tD(GUC)L2 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)MtD(GUC)M 72 nt7.78□□□□□ -1.16
PRP28P23394 tD(GUC)OtD(GUC)O 72 nt7.78□□□□□ -1.16
PRP28P23394 YLR349WYLR349W 507 nt7.78□□□□□ -1.16
PRP28P23394 FET5YFL041W 1869 nt7.78□□□□□ -1.16
PRP28P23394 YLR122CYLR122C 378 nt7.77□□□□□ -1.17
PRP28P23394 ARA2YMR041C 1008 nt7.77□□□□□ -1.17
PRP28P23394 REG2YBR050C 1017 nt7.77□□□□□ -1.17
PRP28P23394 YHR131CYHR131C 2553 nt7.76□□□□□ -1.17
PRP28P23394 AMF1YOR378W 1548 nt7.76□□□□□ -1.17
PRP28P23394 CPD1YGR247W 720 nt7.75□□□□□ -1.17
PRP28P23394 GSF2YML048W 1212 nt7.75□□□□□ -1.17
PRP28P23394 YDR467CYDR467C 327 nt7.74□□□□□ -1.17
PRP28P23394 NAS6YGR232W 687 nt7.74□□□□□ -1.17
PRP28P23394 AI5_BETAQ0075 1065 nt7.73□□□□□ -1.17
PRP28P23394 CRC1YOR100C 984 nt7.73□□□□□ -1.17
PRP28P23394 YTH1YPR107C 627 nt7.73□□□□□ -1.17
PRP28P23394 NPP2YEL016C 1482 nt7.73□□□□□ -1.17
PRP28P23394 FTH1YBR207W 1398 nt7.72□□□□□ -1.17
PRP28P23394 TUB4YLR212C 1422 nt7.72□□□□□ -1.17
PRP28P23394 MGM101YJR144W 810 nt7.72□□□□□ -1.17
PRP28P23394 ENO2YHR174W 1314 nt7.72□□□□□ -1.17
PRP28P23394 MET1YKR069W 1782 nt7.71□□□□□ -1.17
PRP28P23394 GUT1YHL032C 2130 nt7.71□□□□□ -1.18
PRP28P23394 tE(CUC)DtE(CUC)D 72 nt7.69□□□□□ -1.18
PRP28P23394 tE(CUC)ItE(CUC)I 72 nt7.69□□□□□ -1.18
PRP28P23394 CBK1YNL161W 2271 nt7.69□□□□□ -1.18
PRP28P23394 NIF3YGL221C 867 nt7.68□□□□□ -1.18
PRP28P23394 LEU2YCL018W 1095 nt7.68□□□□□ -1.18
PRP28P23394 DUS3YLR401C 2007 nt7.66□□□□□ -1.18
PRP28P23394 TOM20YGR082W 552 nt7.66□□□□□ -1.18
PRP28P23394 GPM1YKL152C 744 nt7.66□□□□□ -1.18
PRP28P23394 YBL095WYBL095W 813 nt7.66□□□□□ -1.18
PRP28P23394 ADH7YCR105W 1086 nt7.65□□□□□ -1.18
PRP28P23394 TRP2YER090W 1524 nt7.65□□□□□ -1.18
PRP28P23394 MLS1YNL117W 1665 nt7.64□□□□□ -1.19
PRP28P23394 KGD2YDR148C 1392 nt7.64□□□□□ -1.19
PRP28P23394 POP2YNR052C 1302 nt7.64□□□□□ -1.19
PRP28P23394 TPC1YGR096W 945 nt7.64□□□□□ -1.19
PRP28P23394 APS2YJR058C 444 nt7.64□□□□□ -1.19
PRP28P23394 FSH2YMR222C 672 nt7.64□□□□□ -1.19
PRP28P23394 YNL190WYNL190W 615 nt7.64□□□□□ -1.19
PRP28P23394 SAN1YDR143C 1833 nt7.64□□□□□ -1.19
PRP28P23394 SBP1YHL034C 885 nt7.63□□□□□ -1.19
PRP28P23394 YKL053WYKL053W 375 nt7.63□□□□□ -1.19
PRP28P23394 YMC2YBR104W 990 nt7.63□□□□□ -1.19
PRP28P23394 GGA2YHR108W 1758 nt7.63□□□□□ -1.19
PRP28P23394 HXT11YOL156W 1704 nt7.62□□□□□ -1.19
PRP28P23394 MET30YIL046W 1923 nt7.62□□□□□ -1.19
PRP28P23394 RAD51YER095W 1203 nt7.61□□□□□ -1.19
PRP28P23394 YRF1-1YDR545W 5391 nt7.61□□□□□ -1.19
PRP28P23394 YRF1-5YLR467W 5391 nt7.61□□□□□ -1.19
PRP28P23394 YRF1-8YOR396W 5391 nt7.61□□□□□ -1.19
PRP28P23394 NAM8YHR086W 1572 nt7.61□□□□□ -1.19
PRP28P23394 THP3YPR045C 1413 nt7.61□□□□□ -1.19
PRP28P23394 SRP54YPR088C 1626 nt7.6□□□□□ -1.19
PRP28P23394 FAF1YIL019W 1041 nt7.6□□□□□ -1.19
PRP28P23394 REX2YLR059C 810 nt7.6□□□□□ -1.19
PRP28P23394 YMR316C-BYMR316C-B 309 nt7.6□□□□□ -1.19
PRP28P23394 ORT1YOR130C 879 nt7.6□□□□□ -1.19
PRP28P23394 PAR32YDL173W 888 nt7.59□□□□□ -1.19
PRP28P23394 PAU15YIR041W 375 nt7.59□□□□□ -1.19
PRP28P23394 STP3YLR375W 1032 nt7.59□□□□□ -1.19
PRP28P23394 ADE16YLR028C 1776 nt7.59□□□□□ -1.2
PRP28P23394 YPT11YNL304W 1254 nt7.58□□□□□ -1.2
PRP28P23394 KRE1YNL322C 942 nt7.58□□□□□ -1.2
PRP28P23394 SRM1YGL097W 1449 nt7.58□□□□□ -1.2
PRP28P23394 LAS17YOR181W 1902 nt7.58□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms