Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 tA(AGC)FtA(AGC)F 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)GtA(AGC)G 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)HtA(AGC)H 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)JtA(AGC)J 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)K1tA(AGC)K1 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)K2tA(AGC)K2 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)LtA(AGC)L 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)M1tA(AGC)M1 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)M2tA(AGC)M2 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 tA(AGC)PtA(AGC)P 73 nt7.96□□□□□ -1.14
TY2A-FP0CX61 YDR467CYDR467C 327 nt7.96□□□□□ -1.14
TY2A-FP0CX61 PHB2YGR231C 933 nt7.96□□□□□ -1.14
TY2A-FP0CX61 SBP1YHL034C 885 nt7.96□□□□□ -1.14
TY2A-FP0CX61 NPP1YCR026C 2229 nt7.95□□□□□ -1.14
TY2A-FP0CX61 MOB1YIL106W 945 nt7.95□□□□□ -1.14
TY2A-FP0CX61 FLX1YIL134W 936 nt7.95□□□□□ -1.14
TY2A-FP0CX61 IPL1YPL209C 1104 nt7.95□□□□□ -1.14
TY2A-FP0CX61 HXT10YFL011W 1641 nt7.95□□□□□ -1.14
TY2A-FP0CX61 LEU4YNL104C 1860 nt7.94□□□□□ -1.14
TY2A-FP0CX61 SDS24YBR214W 1584 nt7.94□□□□□ -1.14
TY2A-FP0CX61 HMG2YLR450W 3138 nt7.94□□□□□ -1.14
TY2A-FP0CX61 YCR025CYCR025C 411 nt7.93□□□□□ -1.14
TY2A-FP0CX61 INH1YDL181W 258 nt7.93□□□□□ -1.14
TY2A-FP0CX61 YPT11YNL304W 1254 nt7.92□□□□□ -1.14
TY2A-FP0CX61 GAS1YMR307W 1680 nt7.92□□□□□ -1.14
TY2A-FP0CX61 YHR218WYHR218W 1812 nt7.92□□□□□ -1.14
TY2A-FP0CX61 PTC6YCR079W 1329 nt7.91□□□□□ -1.14
TY2A-FP0CX61 ENO1YGR254W 1314 nt7.91□□□□□ -1.14
TY2A-FP0CX61 GGA2YHR108W 1758 nt7.9□□□□□ -1.14
TY2A-FP0CX61 DTR1YBR180W 1719 nt7.9□□□□□ -1.14
TY2A-FP0CX61 GPM1YKL152C 744 nt7.9□□□□□ -1.14
TY2A-FP0CX61 PUP1YOR157C 786 nt7.9□□□□□ -1.14
TY2A-FP0CX61 VBA3YCL069W 1377 nt7.89□□□□□ -1.15
TY2A-FP0CX61 GNP1YDR508C 1992 nt7.88□□□□□ -1.15
TY2A-FP0CX61 tE(CUC)DtE(CUC)D 72 nt7.88□□□□□ -1.15
TY2A-FP0CX61 tE(CUC)ItE(CUC)I 72 nt7.88□□□□□ -1.15
TY2A-FP0CX61 CYC3YAL039C 810 nt7.88□□□□□ -1.15
TY2A-FP0CX61 AGP3YFL055W 1677 nt7.88□□□□□ -1.15
TY2A-FP0CX61 YHL008CYHL008C 1884 nt7.87□□□□□ -1.15
TY2A-FP0CX61 YRF1-2YER190W 5046 nt7.87□□□□□ -1.15
TY2A-FP0CX61 THI3YDL080C 1830 nt7.87□□□□□ -1.15
TY2A-FP0CX61 LYS20YDL182W 1287 nt7.86□□□□□ -1.15
TY2A-FP0CX61 YBL095WYBL095W 813 nt7.86□□□□□ -1.15
TY2A-FP0CX61 RSM7YJR113C 744 nt7.85□□□□□ -1.15
TY2A-FP0CX61 YMR316C-BYMR316C-B 309 nt7.85□□□□□ -1.15
TY2A-FP0CX61 YMC2YBR104W 990 nt7.84□□□□□ -1.15
TY2A-FP0CX61 NPP2YEL016C 1482 nt7.83□□□□□ -1.16
TY2A-FP0CX61 SRP102YKL154W 735 nt7.83□□□□□ -1.16
TY2A-FP0CX61 YLR280CYLR280C 351 nt7.82□□□□□ -1.16
TY2A-FP0CX61 SLG1YOR008C 1137 nt7.82□□□□□ -1.16
TY2A-FP0CX61 YPL041CYPL041C 624 nt7.81□□□□□ -1.16
TY2A-FP0CX61 ILV2YMR108W 2064 nt7.8□□□□□ -1.16
TY2A-FP0CX61 ERO1YML130C 1692 nt7.8□□□□□ -1.16
TY2A-FP0CX61 YFR020WYFR020W 699 nt7.8□□□□□ -1.16
TY2A-FP0CX61 SER2YGR208W 930 nt7.8□□□□□ -1.16
TY2A-FP0CX61 RFC1YOR217W 2586 nt7.8□□□□□ -1.16
TY2A-FP0CX61 HXK1YFR053C 1458 nt7.79□□□□□ -1.16
TY2A-FP0CX61 MRS4YKR052C 915 nt7.78□□□□□ -1.16
TY2A-FP0CX61 URA8YJR103W 1737 nt7.78□□□□□ -1.16
TY2A-FP0CX61 HTS1YPR033C 1641 nt7.78□□□□□ -1.16
TY2A-FP0CX61 AAT1YKL106W 1356 nt7.76□□□□□ -1.17
TY2A-FP0CX61 TGA1tA(UGC)A 73 nt7.76□□□□□ -1.17
TY2A-FP0CX61 tA(UGC)EtA(UGC)E 73 nt7.76□□□□□ -1.17
TY2A-FP0CX61 tA(UGC)GtA(UGC)G 73 nt7.76□□□□□ -1.17
TY2A-FP0CX61 tA(UGC)LtA(UGC)L 73 nt7.76□□□□□ -1.17
TY2A-FP0CX61 tA(UGC)OtA(UGC)O 73 nt7.76□□□□□ -1.17
TY2A-FP0CX61 AAC3YBR085W 924 nt7.76□□□□□ -1.17
TY2A-FP0CX61 ALD5YER073W 1563 nt7.76□□□□□ -1.17
TY2A-FP0CX61 SAM50YNL026W 1455 nt7.75□□□□□ -1.17
TY2A-FP0CX61 YCP4YCR004C 744 nt7.75□□□□□ -1.17
TY2A-FP0CX61 YLR460CYLR460C 1131 nt7.75□□□□□ -1.17
TY2A-FP0CX61 TMS1YDR105C 1422 nt7.75□□□□□ -1.17
TY2A-FP0CX61 YJL009WYJL009W 327 nt7.74□□□□□ -1.17
TY2A-FP0CX61 TPN1YGL186C 1740 nt7.73□□□□□ -1.17
TY2A-FP0CX61 YGR210CYGR210C 1236 nt7.73□□□□□ -1.17
TY2A-FP0CX61 MTO1YGL236C 2010 nt7.73□□□□□ -1.17
TY2A-FP0CX61 YJR149WYJR149W 1215 nt7.72□□□□□ -1.17
TY2A-FP0CX61 FCY1YPR062W 477 nt7.72□□□□□ -1.17
TY2A-FP0CX61 YIR035CYIR035C 765 nt7.71□□□□□ -1.18
TY2A-FP0CX61 NBA1YOL070C 1506 nt7.71□□□□□ -1.18
TY2A-FP0CX61 CHS7YHR142W 951 nt7.7□□□□□ -1.18
TY2A-FP0CX61 SWM1YDR260C 513 nt7.69□□□□□ -1.18
TY2A-FP0CX61 BUB2YMR055C 921 nt7.69□□□□□ -1.18
TY2A-FP0CX61 snR86snR86 1004 nt7.68□□□□□ -1.18
TY2A-FP0CX61 YGR139WYGR139W 339 nt7.68□□□□□ -1.18
TY2A-FP0CX61 YMR166CYMR166C 1107 nt7.68□□□□□ -1.18
TY2A-FP0CX61 TRP2YER090W 1524 nt7.68□□□□□ -1.18
TY2A-FP0CX61 EMC3YKL207W 762 nt7.67□□□□□ -1.18
TY2A-FP0CX61 OLA1YBR025C 1185 nt7.67□□□□□ -1.18
TY2A-FP0CX61 YPL108WYPL108W 507 nt7.67□□□□□ -1.18
TY2A-FP0CX61 THI6YPL214C 1623 nt7.67□□□□□ -1.18
TY2A-FP0CX61 CBK1YNL161W 2271 nt7.66□□□□□ -1.18
TY2A-FP0CX61 YMR007WYMR007W 381 nt7.66□□□□□ -1.18
TY2A-FP0CX61 FET5YFL041W 1869 nt7.66□□□□□ -1.18
TY2A-FP0CX61 MET22YOL064C 1074 nt7.65□□□□□ -1.18
TY2A-FP0CX61 MLS1YNL117W 1665 nt7.64□□□□□ -1.19
TY2A-FP0CX61 LSP1YPL004C 1026 nt7.64□□□□□ -1.19
TY2A-FP0CX61 YBR056WYBR056W 1506 nt7.63□□□□□ -1.19
TY2A-FP0CX61 OCH1YGL038C 1443 nt7.63□□□□□ -1.19
TY2A-FP0CX61 CAK1YFL029C 1107 nt7.63□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms