Protein–RNA interactions for Protein: Q06506

RRP9, Ribosomal RNA-processing protein 9, yeastyeast

Known RBP Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP9Q06506 PRP5YBR237W 2550 nt0.66□□□□□ -2.3
RRP9Q06506 YER053C-AYER053C-A 114 nt0.66□□□□□ -2.3
RRP9Q06506 BLI1YKL061W 342 nt0.66□□□□□ -2.3
RRP9Q06506 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
RRP9Q06506 HAL9YOL089C 3093 nt0.63□□□□□ -2.31
RRP9Q06506 LTE1YAL024C 4308 nt0.62□□□□□ -2.31
RRP9Q06506 OST4YDL232W 111 nt0.62□□□□□ -2.31
RRP9Q06506 APQ12YIL040W 417 nt0.62□□□□□ -2.31
RRP9Q06506 YJL127W-AYJL127W-A 117 nt0.62□□□□□ -2.31
RRP9Q06506 YKL100W-AYKL100W-A 90 nt0.62□□□□□ -2.31
RRP9Q06506 PRP42YDR235W 1635 nt0.61□□□□□ -2.31
RRP9Q06506 YIL142C-AYIL142C-A 333 nt0.61□□□□□ -2.31
RRP9Q06506 YNL097C-BYNL097C-B 123 nt0.61□□□□□ -2.31
RRP9Q06506 YIL002W-AYIL002W-A 210 nt0.6□□□□□ -2.31
RRP9Q06506 YOR192C-BYOR192C-B 5313 nt0.6□□□□□ -2.31
RRP9Q06506 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
RRP9Q06506 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
RRP9Q06506 YLR041WYLR041W 321 nt0.59□□□□□ -2.31
RRP9Q06506 YEL014CYEL014C 306 nt0.56□□□□□ -2.32
RRP9Q06506 PET111YMR257C 2403 nt0.54□□□□□ -2.32
RRP9Q06506 YHR131W-AYHR131W-A 246 nt0.54□□□□□ -2.32
RRP9Q06506 YMR158W-BYMR158W-B 321 nt0.54□□□□□ -2.32
RRP9Q06506 YJL182CYJL182C 318 nt0.53□□□□□ -2.32
RRP9Q06506 UTP8YGR128C 2142 nt0.52□□□□□ -2.33
RRP9Q06506 SNU13YEL026W 381 nt0.52□□□□□ -2.33
RRP9Q06506 PAU12YGR294W 363 nt0.52□□□□□ -2.33
RRP9Q06506 TRS65YGR166W 1683 nt0.51□□□□□ -2.33
RRP9Q06506 PRP39YML046W 1890 nt0.51□□□□□ -2.33
RRP9Q06506 BEM3YPL115C 3387 nt0.5□□□□□ -2.33
RRP9Q06506 YSP1YHR155W 3687 nt0.5□□□□□ -2.33
RRP9Q06506 NNF2YGR089W 2811 nt0.49□□□□□ -2.33
RRP9Q06506 FMP27YLR454W 7887 nt0.48□□□□□ -2.33
RRP9Q06506 TAH1YCR060W 336 nt0.47□□□□□ -2.33
RRP9Q06506 YDR544CYDR544C 429 nt0.47□□□□□ -2.33
RRP9Q06506 SBH1YER087C-B 249 nt0.47□□□□□ -2.33
RRP9Q06506 YLR232WYLR232W 348 nt0.47□□□□□ -2.33
RRP9Q06506 YMR160WYMR160W 2451 nt0.47□□□□□ -2.33
RRP9Q06506 snR52snR52 92 nt0.46□□□□□ -2.34
RRP9Q06506 YBL039C-AYBL039C-A 84 nt0.45□□□□□ -2.34
RRP9Q06506 JLP2YMR132C 627 nt0.45□□□□□ -2.34
RRP9Q06506 YDR371C-AYDR371C-A 105 nt0.44□□□□□ -2.34
RRP9Q06506 YLL006W-AYLL006W-A 177 nt0.44□□□□□ -2.34
RRP9Q06506 snR46snR46 197 nt0.44□□□□□ -2.34
RRP9Q06506 ORC3YLL004W 1851 nt0.44□□□□□ -2.34
RRP9Q06506 SPG3YDR504C 384 nt0.43□□□□□ -2.34
RRP9Q06506 YGL182CYGL182C 324 nt0.43□□□□□ -2.34
RRP9Q06506 RPS26AYGL189C 360 nt0.43□□□□□ -2.34
RRP9Q06506 YBR072C-AYBR072C-A 162 nt0.43□□□□□ -2.34
RRP9Q06506 YDR406W-AYDR406W-A 246 nt0.42□□□□□ -2.34
RRP9Q06506 NIP1YMR309C 2439 nt0.41□□□□□ -2.34
RRP9Q06506 MLP1YKR095W 5628 nt0.41□□□□□ -2.34
RRP9Q06506 STF2YGR008C 255 nt0.4□□□□□ -2.35
RRP9Q06506 UTP20YBL004W 7482 nt0.4□□□□□ -2.35
RRP9Q06506 BUL2YML111W 2763 nt0.39□□□□□ -2.35
RRP9Q06506 SDH6YDR379C-A 240 nt0.39□□□□□ -2.35
RRP9Q06506 HUG1YML058W-A 207 nt0.39□□□□□ -2.35
RRP9Q06506 YMR046W-AYMR046W-A 129 nt0.38□□□□□ -2.35
RRP9Q06506 YOR381W-AYOR381W-A 168 nt0.38□□□□□ -2.35
RRP9Q06506 YEL073CYEL073C 324 nt0.36□□□□□ -2.35
RRP9Q06506 YJL150WYJL150W 303 nt0.36□□□□□ -2.35
RRP9Q06506 COG6YNL041C 2520 nt0.36□□□□□ -2.35
RRP9Q06506 YLR342W-AYLR342W-A 174 nt0.35□□□□□ -2.35
RRP9Q06506 GLG1YKR058W 1851 nt0.33□□□□□ -2.36
RRP9Q06506 ULP2YIL031W 3105 nt0.32□□□□□ -2.36
RRP9Q06506 tM(CAU)Q1tM(CAU)Q1 76 nt0.32□□□□□ -2.36
RRP9Q06506 RCO1YMR075W 2055 nt0.32□□□□□ -2.36
RRP9Q06506 YOR314W-AYOR314W-A 111 nt0.31□□□□□ -2.36
RRP9Q06506 CSE1YGL238W 2883 nt0.31□□□□□ -2.36
RRP9Q06506 BIR1YJR089W 2865 nt0.31□□□□□ -2.36
RRP9Q06506 YOR170WYOR170W 306 nt0.3□□□□□ -2.36
RRP9Q06506 YBL100W-BYBL100W-B 5313 nt0.28□□□□□ -2.36
RRP9Q06506 YKL145W-AYKL145W-A 93 nt0.28□□□□□ -2.36
RRP9Q06506 IQG1YPL242C 4488 nt0.28□□□□□ -2.36
RRP9Q06506 YDR210WYDR210W 228 nt0.27□□□□□ -2.37
RRP9Q06506 YOR329W-AYOR329W-A 210 nt0.26□□□□□ -2.37
RRP9Q06506 MLP2YIL149C 5040 nt0.26□□□□□ -2.37
RRP9Q06506 tF(GAA)BtF(GAA)B 73 nt0.25□□□□□ -2.37
RRP9Q06506 tF(GAA)FtF(GAA)F 73 nt0.25□□□□□ -2.37
RRP9Q06506 tF(GAA)GtF(GAA)G 73 nt0.25□□□□□ -2.37
RRP9Q06506 tF(GAA)H1tF(GAA)H1 73 nt0.25□□□□□ -2.37
RRP9Q06506 tF(GAA)H2tF(GAA)H2 73 nt0.25□□□□□ -2.37
RRP9Q06506 tF(GAA)MtF(GAA)M 73 nt0.25□□□□□ -2.37
RRP9Q06506 tF(GAA)P1tF(GAA)P1 73 nt0.25□□□□□ -2.37
RRP9Q06506 tF(GAA)P2tF(GAA)P2 73 nt0.25□□□□□ -2.37
RRP9Q06506 snR39BsnR39B 96 nt0.25□□□□□ -2.37
RRP9Q06506 tM(CAU)Q2tM(CAU)Q2 78 nt0.24□□□□□ -2.37
RRP9Q06506 AI1Q0050 2505 nt0.23□□□□□ -2.37
RRP9Q06506 tL(UAA)QtL(UAA)Q 85 nt0.23□□□□□ -2.37
RRP9Q06506 YNL198CYNL198C 303 nt0.23□□□□□ -2.37
RRP9Q06506 YOR186C-AYOR186C-A 210 nt0.23□□□□□ -2.37
RRP9Q06506 YBL053WYBL053W 375 nt0.22□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 56.4 ms