Protein–RNA interactions for Protein: Q06505

SPN1, Transcription factor SPN1, yeastyeast

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPN1Q06505 YCL001W-BYCL001W-B 255 nt1.35□□□□□ -2.19
SPN1Q06505 SIP4YJL089W 2490 nt1.35□□□□□ -2.19
SPN1Q06505 RAD9YDR217C 3930 nt1.35□□□□□ -2.19
SPN1Q06505 YFR012W-AYFR012W-A 87 nt1.34□□□□□ -2.19
SPN1Q06505 tL(UAA)QtL(UAA)Q 85 nt1.34□□□□□ -2.19
SPN1Q06505 tV(UAC)BtV(UAC)B 74 nt1.34□□□□□ -2.19
SPN1Q06505 tV(UAC)DtV(UAC)D 74 nt1.34□□□□□ -2.19
SPN1Q06505 YLR282CYLR282C 342 nt1.34□□□□□ -2.19
SPN1Q06505 EAF1YDR359C 2949 nt1.33□□□□□ -2.2
SPN1Q06505 BFR2YDR299W 1605 nt1.33□□□□□ -2.2
SPN1Q06505 YGL182CYGL182C 324 nt1.32□□□□□ -2.2
SPN1Q06505 NOP9YJL010C 2001 nt1.32□□□□□ -2.2
SPN1Q06505 APL3YBL037W 3078 nt1.31□□□□□ -2.2
SPN1Q06505 COX5BYIL111W 456 nt1.3□□□□□ -2.2
SPN1Q06505 TAH1YCR060W 336 nt1.29□□□□□ -2.2
SPN1Q06505 YKL100W-AYKL100W-A 90 nt1.29□□□□□ -2.2
SPN1Q06505 YBL039C-AYBL039C-A 84 nt1.29□□□□□ -2.2
SPN1Q06505 YBR200W-AYBR200W-A 165 nt1.29□□□□□ -2.2
SPN1Q06505 CHS6YJL099W 2241 nt1.28□□□□□ -2.2
SPN1Q06505 YML002WYML002W 2214 nt1.28□□□□□ -2.2
SPN1Q06505 YOR329W-AYOR329W-A 210 nt1.28□□□□□ -2.2
SPN1Q06505 ROM2YLR371W 4071 nt1.28□□□□□ -2.21
SPN1Q06505 YJR029WYJR029W 5268 nt1.27□□□□□ -2.21
SPN1Q06505 YPR137C-BYPR137C-B 5268 nt1.27□□□□□ -2.21
SPN1Q06505 snR190snR190 190 nt1.27□□□□□ -2.21
SPN1Q06505 FYV10YIL097W 1551 nt1.26□□□□□ -2.21
SPN1Q06505 STB6YKL072W 2301 nt1.26□□□□□ -2.21
SPN1Q06505 SPT7YBR081C 3999 nt1.26□□□□□ -2.21
SPN1Q06505 NST1YNL091W 3723 nt1.25□□□□□ -2.21
SPN1Q06505 RPL26BYGR034W 384 nt1.24□□□□□ -2.21
SPN1Q06505 QCR9YGR183C 201 nt1.24□□□□□ -2.21
SPN1Q06505 YDR544CYDR544C 429 nt1.23□□□□□ -2.21
SPN1Q06505 ASE1YOR058C 2658 nt1.23□□□□□ -2.21
SPN1Q06505 CDC39YCR093W 6327 nt1.22□□□□□ -2.21
SPN1Q06505 YNL067W-BYNL067W-B 141 nt1.21□□□□□ -2.22
SPN1Q06505 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
SPN1Q06505 YCR095W-AYCR095W-A 159 nt1.19□□□□□ -2.22
SPN1Q06505 YIL071W-AYIL071W-A 477 nt1.19□□□□□ -2.22
SPN1Q06505 YLR232WYLR232W 348 nt1.19□□□□□ -2.22
SPN1Q06505 snR39BsnR39B 96 nt1.19□□□□□ -2.22
SPN1Q06505 YBR099CYBR099C 384 nt1.18□□□□□ -2.22
SPN1Q06505 SCC2YDR180W 4482 nt1.17□□□□□ -2.22
SPN1Q06505 YLR041WYLR041W 321 nt1.17□□□□□ -2.22
SPN1Q06505 OST4YDL232W 111 nt1.16□□□□□ -2.22
SPN1Q06505 SOM1YEL059C-A 225 nt1.16□□□□□ -2.22
SPN1Q06505 YHR131W-AYHR131W-A 246 nt1.16□□□□□ -2.22
SPN1Q06505 DOP1YDR141C 5097 nt1.15□□□□□ -2.22
SPN1Q06505 PRP16YKR086W 3216 nt1.15□□□□□ -2.23
SPN1Q06505 tM(CAU)Q2tM(CAU)Q2 78 nt1.15□□□□□ -2.23
SPN1Q06505 STF2YGR008C 255 nt1.15□□□□□ -2.23
SPN1Q06505 PMP2YEL017C-A 132 nt1.14□□□□□ -2.23
SPN1Q06505 MYO1YHR023W 5787 nt1.14□□□□□ -2.23
SPN1Q06505 BEM2YER155C 6504 nt1.13□□□□□ -2.23
SPN1Q06505 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
SPN1Q06505 YPR117WYPR117W 7470 nt1.12□□□□□ -2.23
SPN1Q06505 tN(GUU)QtN(GUU)Q 71 nt1.12□□□□□ -2.23
SPN1Q06505 HUG1YML058W-A 207 nt1.12□□□□□ -2.23
SPN1Q06505 KAP120YPL125W 3099 nt1.11□□□□□ -2.23
SPN1Q06505 SEC8YPR055W 3198 nt1.1□□□□□ -2.23
SPN1Q06505 YDR210WYDR210W 228 nt1.1□□□□□ -2.23
SPN1Q06505 YNL103W-AYNL103W-A 90 nt1.1□□□□□ -2.23
SPN1Q06505 BEM3YPL115C 3387 nt1.08□□□□□ -2.24
SPN1Q06505 YJL127W-AYJL127W-A 117 nt1.07□□□□□ -2.24
SPN1Q06505 YPR160W-AYPR160W-A 81 nt1.07□□□□□ -2.24
SPN1Q06505 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
SPN1Q06505 COG6YNL041C 2520 nt1.06□□□□□ -2.24
SPN1Q06505 TFB5YDR079C-A 219 nt1.04□□□□□ -2.24
SPN1Q06505 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
SPN1Q06505 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
SPN1Q06505 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
SPN1Q06505 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
SPN1Q06505 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
SPN1Q06505 YLR399W-AYLR399W-A 105 nt1.04□□□□□ -2.24
SPN1Q06505 YBL109WYBL109W 336 nt1.03□□□□□ -2.24
SPN1Q06505 PAU24YBR301W 363 nt1.03□□□□□ -2.24
SPN1Q06505 SEC1YDR164C 2175 nt1.03□□□□□ -2.25
SPN1Q06505 YDR524C-AYDR524C-A 120 nt1.02□□□□□ -2.25
SPN1Q06505 RKR1YMR247C 4689 nt1.02□□□□□ -2.25
SPN1Q06505 UBP3YER151C 2739 nt1.01□□□□□ -2.25
SPN1Q06505 RCO1YMR075W 2055 nt0.97□□□□□ -2.25
SPN1Q06505 YIL142C-AYIL142C-A 333 nt0.97□□□□□ -2.25
SPN1Q06505 YBR072C-AYBR072C-A 162 nt0.97□□□□□ -2.25
SPN1Q06505 snR61snR61 90 nt0.96□□□□□ -2.26
SPN1Q06505 YGR146C-AYGR146C-A 162 nt0.96□□□□□ -2.26
SPN1Q06505 YSP1YHR155W 3687 nt0.95□□□□□ -2.26
SPN1Q06505 BIR1YJR089W 2865 nt0.93□□□□□ -2.26
SPN1Q06505 YMR326CYMR326C 309 nt0.93□□□□□ -2.26
SPN1Q06505 YGL041C-BYGL041C-B 183 nt0.92□□□□□ -2.26
SPN1Q06505 YNL266WYNL266W 420 nt0.91□□□□□ -2.26
SPN1Q06505 YBR178WYBR178W 375 nt0.91□□□□□ -2.26
SPN1Q06505 YOR192C-BYOR192C-B 5313 nt0.89□□□□□ -2.27
SPN1Q06505 YLL006W-AYLL006W-A 177 nt0.89□□□□□ -2.27
SPN1Q06505 GLG1YKR058W 1851 nt0.88□□□□□ -2.27
SPN1Q06505 NNF2YGR089W 2811 nt0.88□□□□□ -2.27
SPN1Q06505 CSE1YGL238W 2883 nt0.86□□□□□ -2.27
SPN1Q06505 ULP2YIL031W 3105 nt0.85□□□□□ -2.27
SPN1Q06505 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
SPN1Q06505 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
SPN1Q06505 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
SPN1Q06505 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms