Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 MSH3YCR092C 3057 nt1.57□□□□□ -2.16
LCD1Q04377 CHS6YJL099W 2241 nt1.57□□□□□ -2.16
LCD1Q04377 RPL26BYGR034W 384 nt1.57□□□□□ -2.16
LCD1Q04377 YCL001W-BYCL001W-B 255 nt1.57□□□□□ -2.16
LCD1Q04377 SEC3YER008C 4011 nt1.56□□□□□ -2.16
LCD1Q04377 YLR041WYLR041W 321 nt1.56□□□□□ -2.16
LCD1Q04377 snR190snR190 190 nt1.56□□□□□ -2.16
LCD1Q04377 ASE1YOR058C 2658 nt1.56□□□□□ -2.16
LCD1Q04377 CDC39YCR093W 6327 nt1.55□□□□□ -2.16
LCD1Q04377 HKR1YDR420W 5409 nt1.55□□□□□ -2.16
LCD1Q04377 STB6YKL072W 2301 nt1.54□□□□□ -2.16
LCD1Q04377 CDC25YLR310C 4770 nt1.53□□□□□ -2.16
LCD1Q04377 TAH1YCR060W 336 nt1.53□□□□□ -2.16
LCD1Q04377 FYV10YIL097W 1551 nt1.53□□□□□ -2.16
LCD1Q04377 SEC21YNL287W 2808 nt1.52□□□□□ -2.17
LCD1Q04377 ROM2YLR371W 4071 nt1.51□□□□□ -2.17
LCD1Q04377 YOR329W-AYOR329W-A 210 nt1.5□□□□□ -2.17
LCD1Q04377 MSN5YDR335W 3675 nt1.5□□□□□ -2.17
LCD1Q04377 tH(GUG)E1tH(GUG)E1 72 nt1.48□□□□□ -2.17
LCD1Q04377 tH(GUG)E2tH(GUG)E2 72 nt1.48□□□□□ -2.17
LCD1Q04377 tH(GUG)G1tH(GUG)G1 72 nt1.48□□□□□ -2.17
LCD1Q04377 tH(GUG)G2tH(GUG)G2 72 nt1.48□□□□□ -2.17
LCD1Q04377 tH(GUG)HtH(GUG)H 72 nt1.48□□□□□ -2.17
LCD1Q04377 tH(GUG)KtH(GUG)K 72 nt1.48□□□□□ -2.17
LCD1Q04377 tH(GUG)MtH(GUG)M 72 nt1.48□□□□□ -2.17
LCD1Q04377 CLU1YMR012W 3834 nt1.46□□□□□ -2.18
LCD1Q04377 YLR232WYLR232W 348 nt1.45□□□□□ -2.18
LCD1Q04377 YNL284C-BYNL284C-B 5268 nt1.45□□□□□ -2.18
LCD1Q04377 OST4YDL232W 111 nt1.44□□□□□ -2.18
LCD1Q04377 QCR9YGR183C 201 nt1.44□□□□□ -2.18
LCD1Q04377 YNL067W-BYNL067W-B 141 nt1.44□□□□□ -2.18
LCD1Q04377 SEC8YPR055W 3198 nt1.44□□□□□ -2.18
LCD1Q04377 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
LCD1Q04377 KAP120YPL125W 3099 nt1.43□□□□□ -2.18
LCD1Q04377 IML1YJR138W 4755 nt1.42□□□□□ -2.18
LCD1Q04377 RAD9YDR217C 3930 nt1.42□□□□□ -2.18
LCD1Q04377 snR39BsnR39B 96 nt1.42□□□□□ -2.18
LCD1Q04377 YCR095W-AYCR095W-A 159 nt1.41□□□□□ -2.18
LCD1Q04377 YIL071W-AYIL071W-A 477 nt1.41□□□□□ -2.18
LCD1Q04377 YDR544CYDR544C 429 nt1.39□□□□□ -2.19
LCD1Q04377 YHR131W-AYHR131W-A 246 nt1.39□□□□□ -2.19
LCD1Q04377 tV(UAC)BtV(UAC)B 74 nt1.39□□□□□ -2.19
LCD1Q04377 tV(UAC)DtV(UAC)D 74 nt1.39□□□□□ -2.19
LCD1Q04377 YBR099CYBR099C 384 nt1.39□□□□□ -2.19
LCD1Q04377 tM(CAU)Q2tM(CAU)Q2 78 nt1.38□□□□□ -2.19
LCD1Q04377 YLR399W-AYLR399W-A 105 nt1.38□□□□□ -2.19
LCD1Q04377 YPR160W-AYPR160W-A 81 nt1.38□□□□□ -2.19
LCD1Q04377 PRP16YKR086W 3216 nt1.38□□□□□ -2.19
LCD1Q04377 SOM1YEL059C-A 225 nt1.37□□□□□ -2.19
LCD1Q04377 tN(GUU)QtN(GUU)Q 71 nt1.34□□□□□ -2.19
LCD1Q04377 COG6YNL041C 2520 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)BtF(GAA)B 73 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)FtF(GAA)F 73 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)GtF(GAA)G 73 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)H1tF(GAA)H1 73 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)H2tF(GAA)H2 73 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)MtF(GAA)M 73 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)P1tF(GAA)P1 73 nt1.3□□□□□ -2.2
LCD1Q04377 tF(GAA)P2tF(GAA)P2 73 nt1.3□□□□□ -2.2
LCD1Q04377 BEM3YPL115C 3387 nt1.29□□□□□ -2.2
LCD1Q04377 RPM2YML091C 3609 nt1.29□□□□□ -2.2
LCD1Q04377 YDR210WYDR210W 228 nt1.29□□□□□ -2.2
LCD1Q04377 SIP4YJL089W 2490 nt1.27□□□□□ -2.21
LCD1Q04377 PMP2YEL017C-A 132 nt1.27□□□□□ -2.21
LCD1Q04377 YJL127W-AYJL127W-A 117 nt1.27□□□□□ -2.21
LCD1Q04377 YSP1YHR155W 3687 nt1.27□□□□□ -2.21
LCD1Q04377 BEM2YER155C 6504 nt1.27□□□□□ -2.21
LCD1Q04377 SPT7YBR081C 3999 nt1.26□□□□□ -2.21
LCD1Q04377 YDL073WYDL073W 2955 nt1.26□□□□□ -2.21
LCD1Q04377 SEC1YDR164C 2175 nt1.25□□□□□ -2.21
LCD1Q04377 VAM6YDL077C 3150 nt1.24□□□□□ -2.21
LCD1Q04377 YGR146C-AYGR146C-A 162 nt1.24□□□□□ -2.21
LCD1Q04377 UBP3YER151C 2739 nt1.23□□□□□ -2.21
LCD1Q04377 YNL103W-AYNL103W-A 90 nt1.22□□□□□ -2.21
LCD1Q04377 SCC2YDR180W 4482 nt1.19□□□□□ -2.22
LCD1Q04377 TFB5YDR079C-A 219 nt1.18□□□□□ -2.22
LCD1Q04377 YBR072C-AYBR072C-A 162 nt1.18□□□□□ -2.22
LCD1Q04377 YDR524C-AYDR524C-A 120 nt1.17□□□□□ -2.22
LCD1Q04377 GLG1YKR058W 1851 nt1.16□□□□□ -2.22
LCD1Q04377 snR61snR61 90 nt1.16□□□□□ -2.22
LCD1Q04377 YBL109WYBL109W 336 nt1.16□□□□□ -2.22
LCD1Q04377 ULP2YIL031W 3105 nt1.16□□□□□ -2.22
LCD1Q04377 BIR1YJR089W 2865 nt1.16□□□□□ -2.22
LCD1Q04377 NST1YNL091W 3723 nt1.15□□□□□ -2.22
LCD1Q04377 DOP1YDR141C 5097 nt1.15□□□□□ -2.23
LCD1Q04377 RKR1YMR247C 4689 nt1.13□□□□□ -2.23
LCD1Q04377 YOL014WYOL014W 375 nt1.13□□□□□ -2.23
LCD1Q04377 RCO1YMR075W 2055 nt1.12□□□□□ -2.23
LCD1Q04377 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
LCD1Q04377 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
LCD1Q04377 YMR326CYMR326C 309 nt1.11□□□□□ -2.23
LCD1Q04377 YBR178WYBR178W 375 nt1.11□□□□□ -2.23
LCD1Q04377 YNL266WYNL266W 420 nt1.1□□□□□ -2.23
LCD1Q04377 NNF2YGR089W 2811 nt1.09□□□□□ -2.23
LCD1Q04377 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
LCD1Q04377 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
LCD1Q04377 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
LCD1Q04377 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
LCD1Q04377 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
LCD1Q04377 YLL006W-AYLL006W-A 177 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms