Protein–RNA interactions for Protein: Q01454

CTF4, DNA polymerase alpha-binding protein, yeastyeast

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF4Q01454 MSH6YDR097C 3729 nt1.8□□□□□ -2.12
CTF4Q01454 BIR1YJR089W 2865 nt1.79□□□□□ -2.12
CTF4Q01454 TBS1YBR150C 3285 nt1.79□□□□□ -2.12
CTF4Q01454 YJL127W-AYJL127W-A 117 nt1.79□□□□□ -2.12
CTF4Q01454 SET3YKR029C 2256 nt1.78□□□□□ -2.12
CTF4Q01454 CTR9YOL145C 3234 nt1.78□□□□□ -2.13
CTF4Q01454 FRK1YPL141C 2598 nt1.77□□□□□ -2.13
CTF4Q01454 COX5BYIL111W 456 nt1.77□□□□□ -2.13
CTF4Q01454 YAR009CYAR009C 3591 nt1.77□□□□□ -2.13
CTF4Q01454 SKI3YPR189W 4299 nt1.77□□□□□ -2.13
CTF4Q01454 IRE1YHR079C 3348 nt1.76□□□□□ -2.13
CTF4Q01454 HUG1YML058W-A 207 nt1.76□□□□□ -2.13
CTF4Q01454 SXM1YDR395W 2835 nt1.75□□□□□ -2.13
CTF4Q01454 SEC21YNL287W 2808 nt1.75□□□□□ -2.13
CTF4Q01454 YLR232WYLR232W 348 nt1.75□□□□□ -2.13
CTF4Q01454 POL5YEL055C 3069 nt1.75□□□□□ -2.13
CTF4Q01454 SEC1YDR164C 2175 nt1.75□□□□□ -2.13
CTF4Q01454 RSM22YKL155C 1887 nt1.74□□□□□ -2.13
CTF4Q01454 TRM732YMR259C 4263 nt1.74□□□□□ -2.13
CTF4Q01454 KCS1YDR017C 3153 nt1.73□□□□□ -2.13
CTF4Q01454 YKL100W-AYKL100W-A 90 nt1.73□□□□□ -2.13
CTF4Q01454 YML002WYML002W 2214 nt1.7□□□□□ -2.14
CTF4Q01454 YDR371C-AYDR371C-A 105 nt1.7□□□□□ -2.14
CTF4Q01454 BST1YFL025C 3090 nt1.69□□□□□ -2.14
CTF4Q01454 RPS26AYGL189C 360 nt1.69□□□□□ -2.14
CTF4Q01454 FYV10YIL097W 1551 nt1.68□□□□□ -2.14
CTF4Q01454 tH(GUG)E1tH(GUG)E1 72 nt1.68□□□□□ -2.14
CTF4Q01454 tH(GUG)E2tH(GUG)E2 72 nt1.68□□□□□ -2.14
CTF4Q01454 tH(GUG)G1tH(GUG)G1 72 nt1.68□□□□□ -2.14
CTF4Q01454 tH(GUG)G2tH(GUG)G2 72 nt1.68□□□□□ -2.14
CTF4Q01454 tH(GUG)HtH(GUG)H 72 nt1.68□□□□□ -2.14
CTF4Q01454 tH(GUG)KtH(GUG)K 72 nt1.68□□□□□ -2.14
CTF4Q01454 tH(GUG)MtH(GUG)M 72 nt1.68□□□□□ -2.14
CTF4Q01454 YGR240C-AYGR240C-A 201 nt1.68□□□□□ -2.14
CTF4Q01454 YOL164W-AYOL164W-A 183 nt1.68□□□□□ -2.14
CTF4Q01454 RAD50YNL250W 3939 nt1.68□□□□□ -2.14
CTF4Q01454 SMC1YFL008W 3678 nt1.67□□□□□ -2.14
CTF4Q01454 SPC110YDR356W 2835 nt1.66□□□□□ -2.14
CTF4Q01454 YGR146C-AYGR146C-A 162 nt1.66□□□□□ -2.14
CTF4Q01454 YBL100W-CYBL100W-C 120 nt1.66□□□□□ -2.14
CTF4Q01454 MYO1YHR023W 5787 nt1.66□□□□□ -2.14
CTF4Q01454 YLR041WYLR041W 321 nt1.65□□□□□ -2.15
CTF4Q01454 snR14snR14 160 nt1.65□□□□□ -2.15
CTF4Q01454 YBR196C-AYBR196C-A 150 nt1.65□□□□□ -2.15
CTF4Q01454 YPR117WYPR117W 7470 nt1.64□□□□□ -2.15
CTF4Q01454 snR47snR47 99 nt1.62□□□□□ -2.15
CTF4Q01454 snR53snR53 91 nt1.62□□□□□ -2.15
CTF4Q01454 SMC4YLR086W 4257 nt1.62□□□□□ -2.15
CTF4Q01454 YNL284C-BYNL284C-B 5268 nt1.62□□□□□ -2.15
CTF4Q01454 GLG1YKR058W 1851 nt1.62□□□□□ -2.15
CTF4Q01454 ORC3YLL004W 1851 nt1.62□□□□□ -2.15
CTF4Q01454 NUT1YGL151W 3399 nt1.62□□□□□ -2.15
CTF4Q01454 GEA2YEL022W 4380 nt1.61□□□□□ -2.15
CTF4Q01454 ALY2YJL084C 3141 nt1.61□□□□□ -2.15
CTF4Q01454 UBP3YER151C 2739 nt1.6□□□□□ -2.15
CTF4Q01454 RPL26BYGR034W 384 nt1.6□□□□□ -2.15
CTF4Q01454 MMS4YBR098W 2076 nt1.6□□□□□ -2.15
CTF4Q01454 tV(UAC)BtV(UAC)B 74 nt1.59□□□□□ -2.15
CTF4Q01454 tV(UAC)DtV(UAC)D 74 nt1.59□□□□□ -2.15
CTF4Q01454 snR190snR190 190 nt1.59□□□□□ -2.15
CTF4Q01454 MON2YNL297C 4911 nt1.58□□□□□ -2.16
CTF4Q01454 HKR1YDR420W 5409 nt1.58□□□□□ -2.16
CTF4Q01454 CDC25YLR310C 4770 nt1.57□□□□□ -2.16
CTF4Q01454 MSN5YDR335W 3675 nt1.57□□□□□ -2.16
CTF4Q01454 tQ(UUG)E2tQ(UUG)E2 72 nt1.57□□□□□ -2.16
CTF4Q01454 PAN2YGL094C 3348 nt1.57□□□□□ -2.16
CTF4Q01454 NOP9YJL010C 2001 nt1.57□□□□□ -2.16
CTF4Q01454 snR64snR64 101 nt1.56□□□□□ -2.16
CTF4Q01454 AZF1YOR113W 2745 nt1.56□□□□□ -2.16
CTF4Q01454 ASE1YOR058C 2658 nt1.55□□□□□ -2.16
CTF4Q01454 FYV8YGR196C 2454 nt1.55□□□□□ -2.16
CTF4Q01454 SIP4YJL089W 2490 nt1.55□□□□□ -2.16
CTF4Q01454 EMC5YIL027C 426 nt1.55□□□□□ -2.16
CTF4Q01454 EST2YLR318W 2655 nt1.54□□□□□ -2.16
CTF4Q01454 YLR286W-AYLR286W-A 135 nt1.54□□□□□ -2.16
CTF4Q01454 CLU1YMR012W 3834 nt1.54□□□□□ -2.16
CTF4Q01454 SEC10YLR166C 2616 nt1.53□□□□□ -2.16
CTF4Q01454 WAR1YML076C 2835 nt1.53□□□□□ -2.16
CTF4Q01454 STO1YMR125W 2586 nt1.53□□□□□ -2.16
CTF4Q01454 RAD9YDR217C 3930 nt1.53□□□□□ -2.17
CTF4Q01454 PET127YOR017W 2403 nt1.52□□□□□ -2.17
CTF4Q01454 NUP145YGL092W 3954 nt1.52□□□□□ -2.17
CTF4Q01454 NNF2YGR089W 2811 nt1.52□□□□□ -2.17
CTF4Q01454 YBR200W-AYBR200W-A 165 nt1.5□□□□□ -2.17
CTF4Q01454 KAP122YGL016W 3246 nt1.49□□□□□ -2.17
CTF4Q01454 snR50snR50 90 nt1.49□□□□□ -2.17
CTF4Q01454 BEM3YPL115C 3387 nt1.48□□□□□ -2.17
CTF4Q01454 YDL073WYDL073W 2955 nt1.47□□□□□ -2.17
CTF4Q01454 SPT7YBR081C 3999 nt1.46□□□□□ -2.18
CTF4Q01454 tN(GUU)QtN(GUU)Q 71 nt1.45□□□□□ -2.18
CTF4Q01454 RPM2YML091C 3609 nt1.44□□□□□ -2.18
CTF4Q01454 SEC3YER008C 4011 nt1.43□□□□□ -2.18
CTF4Q01454 YPR160W-AYPR160W-A 81 nt1.42□□□□□ -2.18
CTF4Q01454 PRP16YKR086W 3216 nt1.42□□□□□ -2.18
CTF4Q01454 YKL225WYKL225W 348 nt1.41□□□□□ -2.18
CTF4Q01454 tD(GUC)QtD(GUC)Q 75 nt1.4□□□□□ -2.19
CTF4Q01454 YLR299C-AYLR299C-A 93 nt1.39□□□□□ -2.19
CTF4Q01454 YCS4YLR272C 3531 nt1.38□□□□□ -2.19
CTF4Q01454 YBR109W-AYBR109W-A 225 nt1.38□□□□□ -2.19
CTF4Q01454 APL3YBL037W 3078 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms