Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 YBL071C-BYBL071C-B 99 nt1.92□□□□□ -2.1
RCM1P53972 MMS4YBR098W 2076 nt1.91□□□□□ -2.1
RCM1P53972 RAD50YNL250W 3939 nt1.91□□□□□ -2.1
RCM1P53972 MSH6YDR097C 3729 nt1.9□□□□□ -2.1
RCM1P53972 FYV10YIL097W 1551 nt1.9□□□□□ -2.1
RCM1P53972 YGR146C-AYGR146C-A 162 nt1.9□□□□□ -2.11
RCM1P53972 UBR2YLR024C 5619 nt1.89□□□□□ -2.11
RCM1P53972 EMC5YIL027C 426 nt1.89□□□□□ -2.11
RCM1P53972 TMA7YLR262C-A 195 nt1.89□□□□□ -2.11
RCM1P53972 MYO2YOR326W 4725 nt1.89□□□□□ -2.11
RCM1P53972 RAD9YDR217C 3930 nt1.87□□□□□ -2.11
RCM1P53972 YDR034C-AYDR034C-A 177 nt1.87□□□□□ -2.11
RCM1P53972 BPH1YCR032W 6504 nt1.87□□□□□ -2.11
RCM1P53972 snR14snR14 160 nt1.86□□□□□ -2.11
RCM1P53972 CCH1YGR217W 6120 nt1.85□□□□□ -2.11
RCM1P53972 NOP9YJL010C 2001 nt1.84□□□□□ -2.11
RCM1P53972 YMR247W-AYMR247W-A 144 nt1.84□□□□□ -2.11
RCM1P53972 SMC1YFL008W 3678 nt1.84□□□□□ -2.12
RCM1P53972 LAA1YJL207C 6045 nt1.83□□□□□ -2.12
RCM1P53972 RPS26AYGL189C 360 nt1.83□□□□□ -2.12
RCM1P53972 snR190snR190 190 nt1.83□□□□□ -2.12
RCM1P53972 YDL073WYDL073W 2955 nt1.82□□□□□ -2.12
RCM1P53972 RPM2YML091C 3609 nt1.82□□□□□ -2.12
RCM1P53972 MEC1YBR136W 7107 nt1.81□□□□□ -2.12
RCM1P53972 ASE1YOR058C 2658 nt1.81□□□□□ -2.12
RCM1P53972 tH(GUG)E1tH(GUG)E1 72 nt1.81□□□□□ -2.12
RCM1P53972 tH(GUG)E2tH(GUG)E2 72 nt1.81□□□□□ -2.12
RCM1P53972 tH(GUG)G1tH(GUG)G1 72 nt1.81□□□□□ -2.12
RCM1P53972 tH(GUG)G2tH(GUG)G2 72 nt1.81□□□□□ -2.12
RCM1P53972 tH(GUG)HtH(GUG)H 72 nt1.81□□□□□ -2.12
RCM1P53972 tH(GUG)KtH(GUG)K 72 nt1.81□□□□□ -2.12
RCM1P53972 tH(GUG)MtH(GUG)M 72 nt1.81□□□□□ -2.12
RCM1P53972 tT(UGU)HtT(UGU)H 72 nt1.81□□□□□ -2.12
RCM1P53972 KCS1YDR017C 3153 nt1.81□□□□□ -2.12
RCM1P53972 KAP122YGL016W 3246 nt1.8□□□□□ -2.12
RCM1P53972 YBR196C-AYBR196C-A 150 nt1.8□□□□□ -2.12
RCM1P53972 YCS4YLR272C 3531 nt1.8□□□□□ -2.12
RCM1P53972 SMC4YLR086W 4257 nt1.8□□□□□ -2.12
RCM1P53972 RPL26BYGR034W 384 nt1.79□□□□□ -2.12
RCM1P53972 YOL164W-AYOL164W-A 183 nt1.79□□□□□ -2.12
RCM1P53972 FIG2YCR089W 4830 nt1.79□□□□□ -2.12
RCM1P53972 YLR422WYLR422W 5799 nt1.78□□□□□ -2.12
RCM1P53972 WAR1YML076C 2835 nt1.78□□□□□ -2.12
RCM1P53972 YBL100W-CYBL100W-C 120 nt1.78□□□□□ -2.12
RCM1P53972 SSK2YNR031C 4740 nt1.77□□□□□ -2.13
RCM1P53972 YGR240C-AYGR240C-A 201 nt1.77□□□□□ -2.13
RCM1P53972 SET3YKR029C 2256 nt1.77□□□□□ -2.13
RCM1P53972 SKI3YPR189W 4299 nt1.76□□□□□ -2.13
RCM1P53972 VPS15YBR097W 4365 nt1.76□□□□□ -2.13
RCM1P53972 STO1YMR125W 2586 nt1.76□□□□□ -2.13
RCM1P53972 ROM2YLR371W 4071 nt1.76□□□□□ -2.13
RCM1P53972 PKH3YDR466W 2697 nt1.75□□□□□ -2.13
RCM1P53972 CDC25YLR310C 4770 nt1.74□□□□□ -2.13
RCM1P53972 IML1YJR138W 4755 nt1.74□□□□□ -2.13
RCM1P53972 AZF1YOR113W 2745 nt1.73□□□□□ -2.13
RCM1P53972 PMD1YER132C 5262 nt1.72□□□□□ -2.13
RCM1P53972 GLG1YKR058W 1851 nt1.7□□□□□ -2.14
RCM1P53972 SEC10YLR166C 2616 nt1.7□□□□□ -2.14
RCM1P53972 snR53snR53 91 nt1.7□□□□□ -2.14
RCM1P53972 NNF2YGR089W 2811 nt1.7□□□□□ -2.14
RCM1P53972 GEA2YEL022W 4380 nt1.7□□□□□ -2.14
RCM1P53972 MON2YNL297C 4911 nt1.7□□□□□ -2.14
RCM1P53972 tQ(UUG)E2tQ(UUG)E2 72 nt1.69□□□□□ -2.14
RCM1P53972 YLR286W-AYLR286W-A 135 nt1.69□□□□□ -2.14
RCM1P53972 SEC3YER008C 4011 nt1.69□□□□□ -2.14
RCM1P53972 PIK1YNL267W 3201 nt1.68□□□□□ -2.14
RCM1P53972 ORC3YLL004W 1851 nt1.68□□□□□ -2.14
RCM1P53972 TRM732YMR259C 4263 nt1.68□□□□□ -2.14
RCM1P53972 UBP3YER151C 2739 nt1.68□□□□□ -2.14
RCM1P53972 snR47snR47 99 nt1.67□□□□□ -2.14
RCM1P53972 YBR200W-AYBR200W-A 165 nt1.65□□□□□ -2.15
RCM1P53972 APL3YBL037W 3078 nt1.64□□□□□ -2.15
RCM1P53972 SWI4YER111C 3282 nt1.63□□□□□ -2.15
RCM1P53972 SXM1YDR395W 2835 nt1.62□□□□□ -2.15
RCM1P53972 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
RCM1P53972 SEC8YPR055W 3198 nt1.61□□□□□ -2.15
RCM1P53972 tN(GUU)QtN(GUU)Q 71 nt1.61□□□□□ -2.15
RCM1P53972 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
RCM1P53972 snR64snR64 101 nt1.6□□□□□ -2.15
RCM1P53972 PET127YOR017W 2403 nt1.6□□□□□ -2.15
RCM1P53972 BEM3YPL115C 3387 nt1.6□□□□□ -2.15
RCM1P53972 SIP4YJL089W 2490 nt1.59□□□□□ -2.15
RCM1P53972 tV(UAC)BtV(UAC)B 74 nt1.58□□□□□ -2.16
RCM1P53972 tV(UAC)DtV(UAC)D 74 nt1.58□□□□□ -2.16
RCM1P53972 YPR160W-AYPR160W-A 81 nt1.58□□□□□ -2.16
RCM1P53972 PRP16YKR086W 3216 nt1.58□□□□□ -2.16
RCM1P53972 YDR371C-AYDR371C-A 105 nt1.56□□□□□ -2.16
RCM1P53972 YLR399W-AYLR399W-A 105 nt1.56□□□□□ -2.16
RCM1P53972 FYV8YGR196C 2454 nt1.56□□□□□ -2.16
RCM1P53972 NUP145YGL092W 3954 nt1.56□□□□□ -2.16
RCM1P53972 tD(GUC)QtD(GUC)Q 75 nt1.55□□□□□ -2.16
RCM1P53972 NUP188YML103C 4968 nt1.55□□□□□ -2.16
RCM1P53972 YSP1YHR155W 3687 nt1.54□□□□□ -2.16
RCM1P53972 PAU12YGR294W 363 nt1.54□□□□□ -2.16
RCM1P53972 PAU24YBR301W 363 nt1.54□□□□□ -2.16
RCM1P53972 HKR1YDR420W 5409 nt1.53□□□□□ -2.16
RCM1P53972 ULP2YIL031W 3105 nt1.53□□□□□ -2.17
RCM1P53972 CDC39YCR093W 6327 nt1.52□□□□□ -2.17
RCM1P53972 YPL060C-AYPL060C-A 3315 nt1.52□□□□□ -2.17
RCM1P53972 BST1YFL025C 3090 nt1.52□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms