Protein–RNA interactions for Protein: P53741

BRE5, UBP3-associated protein BRE5, yeastyeast

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE5P53741 SEC3YER008C 4011 nt1.43□□□□□ -2.18
BRE5P53741 YBL053WYBL053W 375 nt1.42□□□□□ -2.18
BRE5P53741 MSN5YDR335W 3675 nt1.42□□□□□ -2.18
BRE5P53741 SEC21YNL287W 2808 nt1.4□□□□□ -2.18
BRE5P53741 YOR314W-AYOR314W-A 111 nt1.4□□□□□ -2.19
BRE5P53741 snR190snR190 190 nt1.4□□□□□ -2.19
BRE5P53741 TRM732YMR259C 4263 nt1.38□□□□□ -2.19
BRE5P53741 FYV8YGR196C 2454 nt1.38□□□□□ -2.19
BRE5P53741 YGL182CYGL182C 324 nt1.38□□□□□ -2.19
BRE5P53741 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
BRE5P53741 snR48snR48 113 nt1.38□□□□□ -2.19
BRE5P53741 NUP157YER105C 4176 nt1.37□□□□□ -2.19
BRE5P53741 tV(UAC)BtV(UAC)B 74 nt1.37□□□□□ -2.19
BRE5P53741 tV(UAC)DtV(UAC)D 74 nt1.37□□□□□ -2.19
BRE5P53741 YFR012W-AYFR012W-A 87 nt1.36□□□□□ -2.19
BRE5P53741 FYV10YIL097W 1551 nt1.35□□□□□ -2.19
BRE5P53741 PET127YOR017W 2403 nt1.34□□□□□ -2.19
BRE5P53741 YIL020C-AYIL020C-A 339 nt1.34□□□□□ -2.19
BRE5P53741 STB6YKL072W 2301 nt1.34□□□□□ -2.2
BRE5P53741 TAH1YCR060W 336 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)BtF(GAA)B 73 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)FtF(GAA)F 73 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)GtF(GAA)G 73 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)H1tF(GAA)H1 73 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)H2tF(GAA)H2 73 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)MtF(GAA)M 73 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)P1tF(GAA)P1 73 nt1.33□□□□□ -2.2
BRE5P53741 tF(GAA)P2tF(GAA)P2 73 nt1.33□□□□□ -2.2
BRE5P53741 CHS6YJL099W 2241 nt1.33□□□□□ -2.2
BRE5P53741 SIP4YJL089W 2490 nt1.33□□□□□ -2.2
BRE5P53741 YPR117WYPR117W 7470 nt1.33□□□□□ -2.2
BRE5P53741 SEC8YPR055W 3198 nt1.33□□□□□ -2.2
BRE5P53741 YBL039C-AYBL039C-A 84 nt1.32□□□□□ -2.2
BRE5P53741 YLR041WYLR041W 321 nt1.31□□□□□ -2.2
BRE5P53741 NST1YNL091W 3723 nt1.3□□□□□ -2.2
BRE5P53741 YLR232WYLR232W 348 nt1.3□□□□□ -2.2
BRE5P53741 ASE1YOR058C 2658 nt1.29□□□□□ -2.2
BRE5P53741 PRP16YKR086W 3216 nt1.29□□□□□ -2.2
BRE5P53741 tL(UAA)QtL(UAA)Q 85 nt1.28□□□□□ -2.2
BRE5P53741 CDC39YCR093W 6327 nt1.28□□□□□ -2.21
BRE5P53741 RAD9YDR217C 3930 nt1.26□□□□□ -2.21
BRE5P53741 YLR399W-AYLR399W-A 105 nt1.26□□□□□ -2.21
BRE5P53741 KAP120YPL125W 3099 nt1.24□□□□□ -2.21
BRE5P53741 BEM3YPL115C 3387 nt1.23□□□□□ -2.21
BRE5P53741 YOR329W-AYOR329W-A 210 nt1.23□□□□□ -2.21
BRE5P53741 YHR131W-AYHR131W-A 246 nt1.22□□□□□ -2.21
BRE5P53741 YPR160W-AYPR160W-A 81 nt1.22□□□□□ -2.21
BRE5P53741 tM(CAU)Q2tM(CAU)Q2 78 nt1.21□□□□□ -2.22
BRE5P53741 YNL067W-BYNL067W-B 141 nt1.19□□□□□ -2.22
BRE5P53741 YCL001W-BYCL001W-B 255 nt1.19□□□□□ -2.22
BRE5P53741 YDR544CYDR544C 429 nt1.18□□□□□ -2.22
BRE5P53741 Q0143Q0143 153 nt1.17□□□□□ -2.22
BRE5P53741 UBP3YER151C 2739 nt1.17□□□□□ -2.22
BRE5P53741 YOL014WYOL014W 375 nt1.16□□□□□ -2.22
BRE5P53741 YDL073WYDL073W 2955 nt1.16□□□□□ -2.22
BRE5P53741 YSP1YHR155W 3687 nt1.16□□□□□ -2.22
BRE5P53741 SPT7YBR081C 3999 nt1.15□□□□□ -2.22
BRE5P53741 YNL284C-BYNL284C-B 5268 nt1.14□□□□□ -2.23
BRE5P53741 YCR095W-AYCR095W-A 159 nt1.14□□□□□ -2.23
BRE5P53741 tN(GUU)QtN(GUU)Q 71 nt1.14□□□□□ -2.23
BRE5P53741 snR39BsnR39B 96 nt1.13□□□□□ -2.23
BRE5P53741 RPM2YML091C 3609 nt1.13□□□□□ -2.23
BRE5P53741 OST4YDL232W 111 nt1.12□□□□□ -2.23
BRE5P53741 SOM1YEL059C-A 225 nt1.12□□□□□ -2.23
BRE5P53741 COG6YNL041C 2520 nt1.11□□□□□ -2.23
BRE5P53741 YJL127W-AYJL127W-A 117 nt1.09□□□□□ -2.23
BRE5P53741 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
BRE5P53741 YDR210WYDR210W 228 nt1.08□□□□□ -2.24
BRE5P53741 YBR099CYBR099C 384 nt1.08□□□□□ -2.24
BRE5P53741 snR85snR85 171 nt1.07□□□□□ -2.24
BRE5P53741 YIL142C-AYIL142C-A 333 nt1.07□□□□□ -2.24
BRE5P53741 YNL205CYNL205C 423 nt1.07□□□□□ -2.24
BRE5P53741 SCC2YDR180W 4482 nt1.05□□□□□ -2.24
BRE5P53741 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
BRE5P53741 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
BRE5P53741 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
BRE5P53741 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
BRE5P53741 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
BRE5P53741 DOP1YDR141C 5097 nt1.05□□□□□ -2.24
BRE5P53741 YBR072C-AYBR072C-A 162 nt1.04□□□□□ -2.24
BRE5P53741 UTP20YBL004W 7482 nt1.03□□□□□ -2.24
BRE5P53741 YGR146C-AYGR146C-A 162 nt1.03□□□□□ -2.24
BRE5P53741 GLG1YKR058W 1851 nt1.03□□□□□ -2.25
BRE5P53741 ULP2YIL031W 3105 nt1.02□□□□□ -2.25
BRE5P53741 BEM2YER155C 6504 nt1.01□□□□□ -2.25
BRE5P53741 YKL145W-AYKL145W-A 93 nt1.01□□□□□ -2.25
BRE5P53741 YIL071W-AYIL071W-A 477 nt1□□□□□ -2.25
BRE5P53741 SEC1YDR164C 2175 nt1□□□□□ -2.25
BRE5P53741 BUD3YCL014W 4911 nt0.97□□□□□ -2.25
BRE5P53741 YLL006W-AYLL006W-A 177 nt0.97□□□□□ -2.25
BRE5P53741 YMR160WYMR160W 2451 nt0.96□□□□□ -2.26
BRE5P53741 RKR1YMR247C 4689 nt0.95□□□□□ -2.26
BRE5P53741 NNF2YGR089W 2811 nt0.95□□□□□ -2.26
BRE5P53741 LTE1YAL024C 4308 nt0.93□□□□□ -2.26
BRE5P53741 PMP2YEL017C-A 132 nt0.93□□□□□ -2.26
BRE5P53741 YJR029WYJR029W 5268 nt0.91□□□□□ -2.26
BRE5P53741 YPR137C-BYPR137C-B 5268 nt0.91□□□□□ -2.26
BRE5P53741 CSE1YGL238W 2883 nt0.9□□□□□ -2.26
BRE5P53741 BIR1YJR089W 2865 nt0.9□□□□□ -2.26
BRE5P53741 YNL266WYNL266W 420 nt0.86□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms