Protein–RNA interactions for Protein: P53236

RSC1, Chromatin structure-remodeling complex subunit RSC1, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC1P53236 YJL026C-AYJL026C-A 222 nt0.35□□□□□ -2.35
RSC1P53236 YKL118WYKL118W 312 nt0.35□□□□□ -2.35
RSC1P53236 YLR282CYLR282C 342 nt0.35□□□□□ -2.35
RSC1P53236 YPR092WYPR092W 306 nt0.35□□□□□ -2.35
RSC1P53236 tN(GUU)QtN(GUU)Q 71 nt0.34□□□□□ -2.36
RSC1P53236 YOR015WYOR015W 360 nt0.34□□□□□ -2.36
RSC1P53236 YOR161W-AYOR161W-A 81 nt0.34□□□□□ -2.36
RSC1P53236 YCR022CYCR022C 345 nt0.33□□□□□ -2.36
RSC1P53236 YDR183C-AYDR183C-A 258 nt0.33□□□□□ -2.36
RSC1P53236 NNF2YGR089W 2811 nt0.32□□□□□ -2.36
RSC1P53236 THO2YNL139C 4794 nt0.32□□□□□ -2.36
RSC1P53236 ATP6Q0085 780 nt0.32□□□□□ -2.36
RSC1P53236 YNL028WYNL028W 318 nt0.32□□□□□ -2.36
RSC1P53236 RAD61YDR014W 1944 nt0.32□□□□□ -2.36
RSC1P53236 YGR069WYGR069W 336 nt0.31□□□□□ -2.36
RSC1P53236 YJL197C-AYJL197C-A 282 nt0.31□□□□□ -2.36
RSC1P53236 YOR345CYOR345C 351 nt0.31□□□□□ -2.36
RSC1P53236 snR74snR74 88 nt0.3□□□□□ -2.36
RSC1P53236 YDR524W-CYDR524W-C 90 nt0.3□□□□□ -2.36
RSC1P53236 ULI1YFR026C 510 nt0.3□□□□□ -2.36
RSC1P53236 YGL123C-AYGL123C-A 231 nt0.29□□□□□ -2.36
RSC1P53236 YOR072W-BYOR072W-B 162 nt0.29□□□□□ -2.36
RSC1P53236 YNL054W-BYNL054W-B 5250 nt0.28□□□□□ -2.36
RSC1P53236 YLR120W-AYLR120W-A 102 nt0.28□□□□□ -2.36
RSC1P53236 YPR010C-AYPR010C-A 219 nt0.28□□□□□ -2.36
RSC1P53236 YGL052WYGL052W 306 nt0.27□□□□□ -2.37
RSC1P53236 BLI1YKL061W 342 nt0.27□□□□□ -2.37
RSC1P53236 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
RSC1P53236 YCR038W-AYCR038W-A 126 nt0.26□□□□□ -2.37
RSC1P53236 YER053C-AYER053C-A 114 nt0.26□□□□□ -2.37
RSC1P53236 ORC3YLL004W 1851 nt0.26□□□□□ -2.37
RSC1P53236 YDR371C-AYDR371C-A 105 nt0.25□□□□□ -2.37
RSC1P53236 RPL39YJL189W 156 nt0.25□□□□□ -2.37
RSC1P53236 YOR186C-AYOR186C-A 210 nt0.25□□□□□ -2.37
RSC1P53236 RPS26AYGL189C 360 nt0.24□□□□□ -2.37
RSC1P53236 NIP1YMR309C 2439 nt0.23□□□□□ -2.37
RSC1P53236 YMR172C-AYMR172C-A 384 nt0.23□□□□□ -2.37
RSC1P53236 YNL277W-AYNL277W-A 189 nt0.23□□□□□ -2.37
RSC1P53236 COX12YLR038C 252 nt0.22□□□□□ -2.37
RSC1P53236 YLR041WYLR041W 321 nt0.22□□□□□ -2.37
RSC1P53236 YER078W-AYER078W-A 165 nt0.21□□□□□ -2.38
RSC1P53236 BUL2YML111W 2763 nt0.2□□□□□ -2.38
RSC1P53236 YDR366CYDR366C 399 nt0.2□□□□□ -2.38
RSC1P53236 YGL041CYGL041C 204 nt0.2□□□□□ -2.38
RSC1P53236 YLL006W-AYLL006W-A 177 nt0.2□□□□□ -2.38
RSC1P53236 YNL146WYNL146W 303 nt0.2□□□□□ -2.38
RSC1P53236 YDR544CYDR544C 429 nt0.19□□□□□ -2.38
RSC1P53236 SNU13YEL026W 381 nt0.19□□□□□ -2.38
RSC1P53236 YHR131W-AYHR131W-A 246 nt0.19□□□□□ -2.38
RSC1P53236 YOR008C-AYOR008C-A 225 nt0.19□□□□□ -2.38
RSC1P53236 UTP8YGR128C 2142 nt0.17□□□□□ -2.38
RSC1P53236 YBR131C-AYBR131C-A 90 nt0.17□□□□□ -2.38
RSC1P53236 YBL100W-BYBL100W-B 5313 nt0.17□□□□□ -2.38
RSC1P53236 RCO1YMR075W 2055 nt0.17□□□□□ -2.38
RSC1P53236 APQ12YIL040W 417 nt0.16□□□□□ -2.38
RSC1P53236 snR65snR65 100 nt0.15□□□□□ -2.39
RSC1P53236 YIL002W-AYIL002W-A 210 nt0.15□□□□□ -2.39
RSC1P53236 YIR030W-AYIR030W-A 384 nt0.15□□□□□ -2.39
RSC1P53236 YBR072C-AYBR072C-A 162 nt0.15□□□□□ -2.39
RSC1P53236 CSE1YGL238W 2883 nt0.15□□□□□ -2.39
RSC1P53236 snR55snR55 98 nt0.14□□□□□ -2.39
RSC1P53236 YBR182C-AYBR182C-A 195 nt0.14□□□□□ -2.39
RSC1P53236 snR49snR49 165 nt0.14□□□□□ -2.39
RSC1P53236 YKU70YMR284W 1809 nt0.14□□□□□ -2.39
RSC1P53236 tF(GAA)QtF(GAA)Q 75 nt0.13□□□□□ -2.39
RSC1P53236 YLR232WYLR232W 348 nt0.13□□□□□ -2.39
RSC1P53236 TAH1YCR060W 336 nt0.12□□□□□ -2.39
RSC1P53236 YEL014CYEL014C 306 nt0.12□□□□□ -2.39
RSC1P53236 SDH6YDR379C-A 240 nt0.11□□□□□ -2.39
RSC1P53236 YEL073CYEL073C 324 nt0.11□□□□□ -2.39
RSC1P53236 Q0142Q0142 177 nt0.11□□□□□ -2.39
RSC1P53236 YOR231C-AYOR231C-A 201 nt0.11□□□□□ -2.39
RSC1P53236 YPL152W-AYPL152W-A 99 nt0.11□□□□□ -2.39
RSC1P53236 YMR158W-BYMR158W-B 321 nt0.1□□□□□ -2.39
RSC1P53236 YOL155W-AYOL155W-A 135 nt0.09□□□□□ -2.4
RSC1P53236 RPM2YML091C 3609 nt0.06□□□□□ -2.4
RSC1P53236 YML099W-AYML099W-A 330 nt0.06□□□□□ -2.4
RSC1P53236 YOR302WYOR302W 78 nt0.06□□□□□ -2.4
RSC1P53236 snR80snR80 171 nt0.05□□□□□ -2.4
RSC1P53236 YGL188C-AYGL188C-A 141 nt0.05□□□□□ -2.4
RSC1P53236 YJL182CYJL182C 318 nt0.05□□□□□ -2.4
RSC1P53236 YBL039C-AYBL039C-A 84 nt0.05□□□□□ -2.4
RSC1P53236 PRP39YML046W 1890 nt0.04□□□□□ -2.4
RSC1P53236 YER181CYER181C 324 nt0.04□□□□□ -2.4
RSC1P53236 COG6YNL041C 2520 nt0.04□□□□□ -2.4
RSC1P53236 GLG1YKR058W 1851 nt0.02□□□□□ -2.41
RSC1P53236 YGL182CYGL182C 324 nt0.02□□□□□ -2.41
RSC1P53236 YBR099CYBR099C 384 nt0□□□□□ -2.41
RSC1P53236 snR52snR52 92 nt0□□□□□ -2.41
RSC1P53236 EST1YLR233C 2100 nt-0.01□□□□□ -2.41
RSC1P53236 YDR210WYDR210W 228 nt-0.01□□□□□ -2.41
RSC1P53236 snR128snR128 126 nt-0.01□□□□□ -2.41
RSC1P53236 snR45snR45 172 nt-0.01□□□□□ -2.41
RSC1P53236 YNL097C-BYNL097C-B 123 nt-0.02□□□□□ -2.41
RSC1P53236 YOR381W-AYOR381W-A 168 nt-0.02□□□□□ -2.41
RSC1P53236 SOV1YMR066W 2697 nt-0.04□□□□□ -2.42
RSC1P53236 YOR314W-AYOR314W-A 111 nt-0.04□□□□□ -2.42
RSC1P53236 tM(CAU)Q2tM(CAU)Q2 78 nt-0.07□□□□□ -2.42
RSC1P53236 snR8snR8 190 nt-0.08□□□□□ -2.42
RSC1P53236 YOR329W-AYOR329W-A 210 nt-0.09□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms