Protein–RNA interactions for Protein: P53165

SGF73, SAGA-associated factor 73, yeastyeast

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGF73P53165 YOR161W-AYOR161W-A 81 nt1.12□□□□□ -2.23
SGF73P53165 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
SGF73P53165 KAP120YPL125W 3099 nt1.12□□□□□ -2.23
SGF73P53165 YFR012W-AYFR012W-A 87 nt1.11□□□□□ -2.23
SGF73P53165 BFR2YDR299W 1605 nt1.1□□□□□ -2.23
SGF73P53165 PRP42YDR235W 1635 nt1.09□□□□□ -2.23
SGF73P53165 snR190snR190 190 nt1.09□□□□□ -2.23
SGF73P53165 YML002WYML002W 2214 nt1.09□□□□□ -2.24
SGF73P53165 SPT7YBR081C 3999 nt1.09□□□□□ -2.24
SGF73P53165 PRP5YBR237W 2550 nt1.07□□□□□ -2.24
SGF73P53165 YLR041WYLR041W 321 nt1.06□□□□□ -2.24
SGF73P53165 UTP8YGR128C 2142 nt1.06□□□□□ -2.24
SGF73P53165 SEC8YPR055W 3198 nt1.04□□□□□ -2.24
SGF73P53165 PRP16YKR086W 3216 nt1.04□□□□□ -2.24
SGF73P53165 UTP20YBL004W 7482 nt1.04□□□□□ -2.24
SGF73P53165 FYV10YIL097W 1551 nt1.03□□□□□ -2.24
SGF73P53165 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
SGF73P53165 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
SGF73P53165 SCC2YDR180W 4482 nt1.02□□□□□ -2.25
SGF73P53165 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
SGF73P53165 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
SGF73P53165 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
SGF73P53165 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
SGF73P53165 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
SGF73P53165 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
SGF73P53165 BUD3YCL014W 4911 nt1□□□□□ -2.25
SGF73P53165 YDL007C-AYDL007C-A 258 nt0.99□□□□□ -2.25
SGF73P53165 YGL182CYGL182C 324 nt0.99□□□□□ -2.25
SGF73P53165 YLR399W-AYLR399W-A 105 nt0.99□□□□□ -2.25
SGF73P53165 YPR160W-AYPR160W-A 81 nt0.99□□□□□ -2.25
SGF73P53165 BEM2YER155C 6504 nt0.98□□□□□ -2.25
SGF73P53165 YBL039C-AYBL039C-A 84 nt0.98□□□□□ -2.25
SGF73P53165 TAH1YCR060W 336 nt0.97□□□□□ -2.25
SGF73P53165 snR48snR48 113 nt0.97□□□□□ -2.25
SGF73P53165 YOR102WYOR102W 351 nt0.96□□□□□ -2.26
SGF73P53165 YOR170WYOR170W 306 nt0.96□□□□□ -2.26
SGF73P53165 YHL015W-AYHL015W-A 84 nt0.95□□□□□ -2.26
SGF73P53165 YBL053WYBL053W 375 nt0.95□□□□□ -2.26
SGF73P53165 SNU13YEL026W 381 nt0.94□□□□□ -2.26
SGF73P53165 YHR131W-AYHR131W-A 246 nt0.94□□□□□ -2.26
SGF73P53165 YLR232WYLR232W 348 nt0.94□□□□□ -2.26
SGF73P53165 DOP1YDR141C 5097 nt0.92□□□□□ -2.26
SGF73P53165 tN(GUU)QtN(GUU)Q 71 nt0.92□□□□□ -2.26
SGF73P53165 YDL073WYDL073W 2955 nt0.91□□□□□ -2.26
SGF73P53165 Q0092Q0092 141 nt0.9□□□□□ -2.27
SGF73P53165 PAU12YGR294W 363 nt0.9□□□□□ -2.27
SGF73P53165 PAU24YBR301W 363 nt0.9□□□□□ -2.27
SGF73P53165 CHS6YJL099W 2241 nt0.89□□□□□ -2.27
SGF73P53165 ATP8Q0080 147 nt0.89□□□□□ -2.27
SGF73P53165 YGR164WYGR164W 336 nt0.89□□□□□ -2.27
SGF73P53165 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
SGF73P53165 YOR314W-AYOR314W-A 111 nt0.89□□□□□ -2.27
SGF73P53165 RPM2YML091C 3609 nt0.89□□□□□ -2.27
SGF73P53165 tL(UAA)QtL(UAA)Q 85 nt0.88□□□□□ -2.27
SGF73P53165 YSP1YHR155W 3687 nt0.88□□□□□ -2.27
SGF73P53165 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
SGF73P53165 OST4YDL232W 111 nt0.86□□□□□ -2.27
SGF73P53165 BEM3YPL115C 3387 nt0.85□□□□□ -2.27
SGF73P53165 YNL170WYNL170W 396 nt0.85□□□□□ -2.27
SGF73P53165 YOR329W-AYOR329W-A 210 nt0.85□□□□□ -2.27
SGF73P53165 tF(GAA)BtF(GAA)B 73 nt0.84□□□□□ -2.27
SGF73P53165 tF(GAA)FtF(GAA)F 73 nt0.84□□□□□ -2.27
SGF73P53165 SDH6YDR379C-A 240 nt0.84□□□□□ -2.27
SGF73P53165 tF(GAA)GtF(GAA)G 73 nt0.84□□□□□ -2.27
SGF73P53165 tF(GAA)H1tF(GAA)H1 73 nt0.84□□□□□ -2.27
SGF73P53165 tF(GAA)H2tF(GAA)H2 73 nt0.84□□□□□ -2.27
SGF73P53165 tF(GAA)MtF(GAA)M 73 nt0.84□□□□□ -2.27
SGF73P53165 tF(GAA)P1tF(GAA)P1 73 nt0.84□□□□□ -2.27
SGF73P53165 tF(GAA)P2tF(GAA)P2 73 nt0.84□□□□□ -2.27
SGF73P53165 YDR544CYDR544C 429 nt0.84□□□□□ -2.27
SGF73P53165 RKR1YMR247C 4689 nt0.84□□□□□ -2.27
SGF73P53165 QCR9YGR183C 201 nt0.81□□□□□ -2.28
SGF73P53165 YMR160WYMR160W 2451 nt0.8□□□□□ -2.28
SGF73P53165 COG6YNL041C 2520 nt0.8□□□□□ -2.28
SGF73P53165 SEC1YDR164C 2175 nt0.79□□□□□ -2.28
SGF73P53165 tM(CAU)Q2tM(CAU)Q2 78 nt0.79□□□□□ -2.28
SGF73P53165 YNL067W-BYNL067W-B 141 nt0.78□□□□□ -2.28
SGF73P53165 snR39BsnR39B 96 nt0.78□□□□□ -2.28
SGF73P53165 ULP2YIL031W 3105 nt0.78□□□□□ -2.28
SGF73P53165 YJL127W-AYJL127W-A 117 nt0.76□□□□□ -2.29
SGF73P53165 YBR072C-AYBR072C-A 162 nt0.76□□□□□ -2.29
SGF73P53165 GLG1YKR058W 1851 nt0.75□□□□□ -2.29
SGF73P53165 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
SGF73P53165 YDR210WYDR210W 228 nt0.74□□□□□ -2.29
SGF73P53165 NNF2YGR089W 2811 nt0.74□□□□□ -2.29
SGF73P53165 YLL006W-AYLL006W-A 177 nt0.73□□□□□ -2.29
SGF73P53165 MYO1YHR023W 5787 nt0.72□□□□□ -2.29
SGF73P53165 YGR146C-AYGR146C-A 162 nt0.71□□□□□ -2.3
SGF73P53165 BIR1YJR089W 2865 nt0.7□□□□□ -2.3
SGF73P53165 YCR095W-AYCR095W-A 159 nt0.69□□□□□ -2.3
SGF73P53165 YCL001W-BYCL001W-B 255 nt0.69□□□□□ -2.3
SGF73P53165 tT(AGU)BtT(AGU)B 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)CtT(AGU)C 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)DtT(AGU)D 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)HtT(AGU)H 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)I1tT(AGU)I1 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)I2tT(AGU)I2 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)JtT(AGU)J 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)N1tT(AGU)N1 73 nt0.68□□□□□ -2.3
SGF73P53165 tT(AGU)N2tT(AGU)N2 73 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms